RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-207ENST00000587256 BCANQ96GW7 911 aa22.07■■□□□ 1.12
ATG4D-207ENST00000587256 RAB3GAP2Q9H2M9 1393 aa22.07■■□□□ 1.12
ATG4D-207ENST00000587256 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
ATG4D-207ENST00000587256 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
ATG4D-207ENST00000587256 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
ATG4D-207ENST00000587256 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.12
ATG4D-207ENST00000587256 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
ATG4D-207ENST00000587256 STRCP1A6NGW2 1772 aa22.02■■□□□ 1.12
ATG4D-207ENST00000587256 KIF1BO60333 1816 aa22.02■■□□□ 1.12
ATG4D-207ENST00000587256 FOXD1Q16676 465 aa22.02■■□□□ 1.12
ATG4D-207ENST00000587256 ZNF326Q5BKZ1 582 aaKnown RBP22.02■■□□□ 1.12
ATG4D-207ENST00000587256 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
ATG4D-207ENST00000587256 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
ATG4D-207ENST00000587256 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
ATG4D-207ENST00000587256 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
ATG4D-207ENST00000587256 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
ATG4D-207ENST00000587256 DIP2AQ14689 1571 aa21.96■■□□□ 1.11
ATG4D-207ENST00000587256 NEXMIFQ5QGS0 1516 aa21.96■■□□□ 1.11
ATG4D-207ENST00000587256 NWD1Q149M9 1564 aa21.95■■□□□ 1.1
ATG4D-207ENST00000587256 UBAP1LF5GYI3 381 aa21.94■■□□□ 1.1
ATG4D-207ENST00000587256 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
ATG4D-207ENST00000587256 ADAMTS13Q76LX8 1427 aa21.92■■□□□ 1.1
ATG4D-207ENST00000587256 KCNA6P17658 529 aa21.91■■□□□ 1.1
ATG4D-207ENST00000587256 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
ATG4D-207ENST00000587256 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
ATG4D-207ENST00000587256 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
ATG4D-207ENST00000587256 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
ATG4D-207ENST00000587256 CHD2O14647 1828 aaKnown RBP21.86■■□□□ 1.09
ATG4D-207ENST00000587256 TOM1O60784 492 aa21.86■■□□□ 1.09
ATG4D-207ENST00000587256 HRCP23327 699 aa21.86■■□□□ 1.09
ATG4D-207ENST00000587256 PPLO60437 1756 aa21.86■■□□□ 1.09
ATG4D-207ENST00000587256 TMEM94Q12767 1356 aa21.86■■□□□ 1.09
ATG4D-207ENST00000587256 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
ATG4D-207ENST00000587256 PIK3R4Q99570 1358 aa21.85■■□□□ 1.09
ATG4D-207ENST00000587256 XIRP1Q702N8 1843 aaKnown RBP21.85■■□□□ 1.09
ATG4D-207ENST00000587256 SPATA31E1Q6ZUB1 1445 aa21.84■■□□□ 1.09
ATG4D-207ENST00000587256 PROSER2Q86WR7 435 aaPredicted RBP21.84■■□□□ 1.09
ATG4D-207ENST00000587256 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-207ENST00000587256 PIP4K2BP78356 416 aa21.82■■□□□ 1.08
ATG4D-207ENST00000587256 RGL3Q3MIN7 710 aa21.81■■□□□ 1.08
ATG4D-207ENST00000587256 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
ATG4D-207ENST00000587256 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
ATG4D-207ENST00000587256 XRN1Q8IZH2 1706 aaKnown RBP21.78■■□□□ 1.08
ATG4D-207ENST00000587256 IFT172Q9UG01 1749 aa21.78■■□□□ 1.08
ATG4D-207ENST00000587256 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
ATG4D-207ENST00000587256 METP08581 1390 aa21.77■■□□□ 1.08
ATG4D-207ENST00000587256 ANKRD30BQ9BXX2 1392 aa21.77■■□□□ 1.08
ATG4D-207ENST00000587256 MSH6P52701 1360 aa21.76■■□□□ 1.07
ATG4D-207ENST00000587256 AMOTL2Q9Y2J4 779 aa21.76■■□□□ 1.07
ATG4D-207ENST00000587256 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
ATG4D-207ENST00000587256 SETD1AO15047 1707 aaKnown RBP21.75■■□□□ 1.07
ATG4D-207ENST00000587256 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
ATG4D-207ENST00000587256 NCOA3Q9Y6Q9 1424 aa21.71■■□□□ 1.07
ATG4D-207ENST00000587256 MYOM2P54296 1465 aa21.7■■□□□ 1.06
ATG4D-207ENST00000587256 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
ATG4D-207ENST00000587256 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
ATG4D-207ENST00000587256 HSPA1LP34931 641 aa21.66■■□□□ 1.06
ATG4D-207ENST00000587256 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-207ENST00000587256 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.64■■□□□ 1.06
ATG4D-207ENST00000587256 NRXN1Q9ULB1 1477 aa21.64■■□□□ 1.05
ATG4D-207ENST00000587256 LAMC1P11047 1609 aa21.63■■□□□ 1.05
ATG4D-207ENST00000587256 PRAG1Q86YV5 1406 aa21.63■■□□□ 1.05
ATG4D-207ENST00000587256 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
ATG4D-207ENST00000587256 ASXL1Q8IXJ9 1541 aa21.62■■□□□ 1.05
ATG4D-207ENST00000587256 ATF3P18847 181 aa21.62■■□□□ 1.05
ATG4D-207ENST00000587256 C19orf44Q9H6X5 657 aa21.62■■□□□ 1.05
ATG4D-207ENST00000587256 FAM135BQ49AJ0 1406 aa21.62■■□□□ 1.05
ATG4D-207ENST00000587256 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
ATG4D-207ENST00000587256 DCCP43146 1447 aa21.61■■□□□ 1.05
ATG4D-207ENST00000587256 ROBO2Q9HCK4 1378 aa21.61■■□□□ 1.05
ATG4D-207ENST00000587256 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
ATG4D-207ENST00000587256 CADPS2Q86UW7 1296 aa21.6■■□□□ 1.05
ATG4D-207ENST00000587256 SLAIN2Q9P270 581 aa21.59■■□□□ 1.05
ATG4D-207ENST00000587256 DCAF11Q8TEB1 546 aa21.58■■□□□ 1.05
ATG4D-207ENST00000587256 LRPPRCP42704 1394 aaKnown RBP21.57■■□□□ 1.04
ATG4D-207ENST00000587256 KNDC1Q76NI1 1749 aa21.57■■□□□ 1.04
ATG4D-207ENST00000587256 TECPR2O15040 1411 aa21.56■■□□□ 1.04
ATG4D-207ENST00000587256 TMEM132EQ6IEE7 984 aa21.56■■□□□ 1.04
ATG4D-207ENST00000587256 STK26Q9P289 416 aa21.56■■□□□ 1.04
ATG4D-207ENST00000587256 KDM2AQ9Y2K7 1162 aa21.56■■□□□ 1.04
ATG4D-207ENST00000587256 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
ATG4D-207ENST00000587256 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
ATG4D-207ENST00000587256 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
ATG4D-207ENST00000587256 C14orf93Q9H972 538 aaKnown RBP21.54■■□□□ 1.04
ATG4D-207ENST00000587256 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
ATG4D-207ENST00000587256 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
ATG4D-207ENST00000587256 MST1RQ04912 1400 aa21.52■■□□□ 1.04
ATG4D-207ENST00000587256 PHLPP1O60346 1717 aa21.49■■□□□ 1.03
ATG4D-207ENST00000587256 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
ATG4D-207ENST00000587256 ADGRB1O14514 1584 aa21.48■■□□□ 1.03
ATG4D-207ENST00000587256 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
ATG4D-207ENST00000587256 PLEKHH1Q9ULM0 1364 aa21.47■■□□□ 1.03
ATG4D-207ENST00000587256 MED1Q15648 1581 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-207ENST00000587256 WAPLQ7Z5K2 1190 aa21.46■■□□□ 1.03
ATG4D-207ENST00000587256 AHDC1Q5TGY3 1603 aaPredicted RBP21.45■■□□□ 1.02
ATG4D-207ENST00000587256 BRINP3Q76B58 766 aa21.45■■□□□ 1.02
ATG4D-207ENST00000587256 C1orf167Q5SNV9 1468 aa21.44■■□□□ 1.02
ATG4D-207ENST00000587256 DLC1Q96QB1 1528 aa21.44■■□□□ 1.02
ATG4D-207ENST00000587256 COL16A1Q07092 1604 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms