RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 UBAP1LF5GYI3 381 aa33.29■■■□□ 2.92
DDX39A-205ENST00000586993 CPS1P31327 1500 aa33.28■■■□□ 2.92
DDX39A-205ENST00000586993 RAB3GAP2Q9H2M9 1393 aa33.28■■■□□ 2.92
DDX39A-205ENST00000586993 FOXD1Q16676 465 aa33.25■■■□□ 2.91
DDX39A-205ENST00000586993 DISP3Q9P2K9 1392 aa33.22■■■□□ 2.91
DDX39A-205ENST00000586993 MPHOSPH9Q99550 1183 aa33.22■■■□□ 2.91
DDX39A-205ENST00000586993 SENP3Q9H4L4 574 aaPredicted RBP33.22■■■□□ 2.91
DDX39A-205ENST00000586993 PLEKHG1Q9ULL1 1385 aa33.21■■■□□ 2.91
DDX39A-205ENST00000586993 KIF1BO60333 1816 aa33.21■■■□□ 2.91
DDX39A-205ENST00000586993 NUTM2DQ5VT03 806 aaPredicted RBP33.21■■■□□ 2.91
DDX39A-205ENST00000586993 SLC26A8Q96RN1 970 aa33.2■■■□□ 2.91
DDX39A-205ENST00000586993 PPP1R15AO75807 674 aaPredicted RBP33.18■■■□□ 2.9
DDX39A-205ENST00000586993 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.16■■■□□ 2.9
DDX39A-205ENST00000586993 HDGFP51858 240 aaKnown RBP33.15■■■□□ 2.9
DDX39A-205ENST00000586993 LRRC7Q96NW7 1537 aa33.15■■■□□ 2.9
DDX39A-205ENST00000586993 NEXMIFQ5QGS0 1516 aa33.13■■■□□ 2.89
DDX39A-205ENST00000586993 BCANQ96GW7 911 aa33.12■■■□□ 2.89
DDX39A-205ENST00000586993 ADAMTS13Q76LX8 1427 aa33.11■■■□□ 2.89
DDX39A-205ENST00000586993 ACIN1Q9UKV3 1341 aaKnown RBP33.11■■■□□ 2.89
DDX39A-205ENST00000586993 ZNF326Q5BKZ1 582 aaKnown RBP33.11■■■□□ 2.89
DDX39A-205ENST00000586993 NRXN3Q9Y4C0 1643 aa33.09■■■□□ 2.89
DDX39A-205ENST00000586993 NWD1Q149M9 1564 aa33.09■■■□□ 2.89
DDX39A-205ENST00000586993 XIRP1Q702N8 1843 aaKnown RBP33.08■■■□□ 2.89
DDX39A-205ENST00000586993 TOM1O60784 492 aa33.07■■■□□ 2.88
DDX39A-205ENST00000586993 CCDC144AA2RUR9 1427 aa33.05■■■□□ 2.88
DDX39A-205ENST00000586993 CHD2O14647 1828 aaKnown RBP33.05■■■□□ 2.88
DDX39A-205ENST00000586993 DIP2AQ14689 1571 aa33.04■■■□□ 2.88
DDX39A-205ENST00000586993 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
DDX39A-205ENST00000586993 KCNA6P17658 529 aa33.04■■■□□ 2.88
DDX39A-205ENST00000586993 SETBP1Q9Y6X0 1596 aa33.04■■■□□ 2.88
DDX39A-205ENST00000586993 ILDR2Q71H61 639 aa33.03■■■□□ 2.88
DDX39A-205ENST00000586993 ALKQ9UM73 1620 aa33.02■■■□□ 2.88
DDX39A-205ENST00000586993 PIP4K2BP78356 416 aa33.02■■■□□ 2.88
DDX39A-205ENST00000586993 TBX22Q9Y458 520 aa33.02■■■□□ 2.88
DDX39A-205ENST00000586993 HRCP23327 699 aa33■■■□□ 2.87
DDX39A-205ENST00000586993 PPLO60437 1756 aa33■■■□□ 2.87
DDX39A-205ENST00000586993 SPATA31E1Q6ZUB1 1445 aa32.99■■■□□ 2.87
DDX39A-205ENST00000586993 NKTRP30414 1462 aaKnown RBP32.99■■■□□ 2.87
DDX39A-205ENST00000586993 TMEM94Q12767 1356 aa32.95■■■□□ 2.86
DDX39A-205ENST00000586993 HSPA1LP34931 641 aa32.94■■■□□ 2.86
DDX39A-205ENST00000586993 RBM33Q96EV2 1170 aaKnown RBP32.92■■■□□ 2.86
DDX39A-205ENST00000586993 PTPRUQ92729 1446 aa32.92■■■□□ 2.86
DDX39A-205ENST00000586993 IFT172Q9UG01 1749 aa32.91■■■□□ 2.86
DDX39A-205ENST00000586993 RPGRIP1LQ68CZ1 1315 aa32.91■■■□□ 2.86
DDX39A-205ENST00000586993 PIK3R4Q99570 1358 aa32.91■■■□□ 2.86
DDX39A-205ENST00000586993 PROSER2Q86WR7 435 aaPredicted RBP32.9■■■□□ 2.86
DDX39A-205ENST00000586993 ANKRD30BQ9BXX2 1392 aa32.89■■■□□ 2.86
DDX39A-205ENST00000586993 SETD1AO15047 1707 aaKnown RBP32.88■■■□□ 2.85
DDX39A-205ENST00000586993 RGL3Q3MIN7 710 aa32.88■■■□□ 2.85
DDX39A-205ENST00000586993 METP08581 1390 aa32.87■■■□□ 2.85
DDX39A-205ENST00000586993 XRN1Q8IZH2 1706 aaKnown RBP32.87■■■□□ 2.85
DDX39A-205ENST00000586993 VGFO15240 615 aaPredicted RBP32.86■■■□□ 2.85
DDX39A-205ENST00000586993 SOCS7O14512 581 aa32.82■■■□□ 2.84
DDX39A-205ENST00000586993 AMOTL2Q9Y2J4 779 aa32.81■■■□□ 2.84
DDX39A-205ENST00000586993 ADGRF5Q8IZF2 1346 aa32.8■■■□□ 2.84
DDX39A-205ENST00000586993 MSH6P52701 1360 aa32.71■■■□□ 2.83
DDX39A-205ENST00000586993 NCOA3Q9Y6Q9 1424 aa32.71■■■□□ 2.83
DDX39A-205ENST00000586993 PIK3C2GO75747 1445 aa32.7■■■□□ 2.83
DDX39A-205ENST00000586993 MED1Q15648 1581 aaPredicted RBP32.7■■■□□ 2.82
DDX39A-205ENST00000586993 MYOM2P54296 1465 aa32.68■■■□□ 2.82
DDX39A-205ENST00000586993 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.68■■■□□ 2.82
DDX39A-205ENST00000586993 NRXN1Q9ULB1 1477 aa32.67■■■□□ 2.82
DDX39A-205ENST00000586993 ASXL1Q8IXJ9 1541 aa32.67■■■□□ 2.82
DDX39A-205ENST00000586993 PRAG1Q86YV5 1406 aa32.63■■■□□ 2.81
DDX39A-205ENST00000586993 C14orf37Q86TY3 774 aa32.63■■■□□ 2.81
DDX39A-205ENST00000586993 PTCH1Q13635 1447 aa32.62■■■□□ 2.81
DDX39A-205ENST00000586993 ROBO2Q9HCK4 1378 aa32.62■■■□□ 2.81
DDX39A-205ENST00000586993 TRIM26Q12899 539 aaPredicted RBP32.62■■■□□ 2.81
DDX39A-205ENST00000586993 ROBO1Q9Y6N7 1651 aa32.61■■■□□ 2.81
DDX39A-205ENST00000586993 NALCNQ8IZF0 1738 aa32.6■■■□□ 2.81
DDX39A-205ENST00000586993 FAM135BQ49AJ0 1406 aa32.6■■■□□ 2.81
DDX39A-205ENST00000586993 C19orf44Q9H6X5 657 aa32.59■■■□□ 2.81
DDX39A-205ENST00000586993 DHX57Q6P158 1386 aaKnown RBP32.57■■■□□ 2.8
DDX39A-205ENST00000586993 SLAIN2Q9P270 581 aa32.56■■■□□ 2.8
DDX39A-205ENST00000586993 ADGRL3Q9HAR2 1447 aa32.56■■■□□ 2.8
DDX39A-205ENST00000586993 LAMC1P11047 1609 aa32.55■■■□□ 2.8
DDX39A-205ENST00000586993 TMEM132EQ6IEE7 984 aa32.54■■■□□ 2.8
DDX39A-205ENST00000586993 DCCP43146 1447 aa32.53■■■□□ 2.8
DDX39A-205ENST00000586993 C14orf93Q9H972 538 aaKnown RBP32.53■■■□□ 2.8
DDX39A-205ENST00000586993 KNDC1Q76NI1 1749 aa32.52■■■□□ 2.8
DDX39A-205ENST00000586993 PHF23Q9BUL5 403 aaPredicted RBP32.52■■■□□ 2.8
DDX39A-205ENST00000586993 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
DDX39A-205ENST00000586993 TECPR2O15040 1411 aa32.51■■■□□ 2.8
DDX39A-205ENST00000586993 CFAP70Q5T0N1 1121 aa32.51■■■□□ 2.79
DDX39A-205ENST00000586993 CADPS2Q86UW7 1296 aa32.51■■■□□ 2.79
DDX39A-205ENST00000586993 DCAF11Q8TEB1 546 aa32.51■■■□□ 2.79
DDX39A-205ENST00000586993 ATF3P18847 181 aa32.5■■■□□ 2.79
DDX39A-205ENST00000586993 KDM2AQ9Y2K7 1162 aa32.5■■■□□ 2.79
DDX39A-205ENST00000586993 STK26Q9P289 416 aa32.49■■■□□ 2.79
DDX39A-205ENST00000586993 YTHDC2Q9H6S0 1430 aaKnown RBP32.48■■■□□ 2.79
DDX39A-205ENST00000586993 ABCC11Q96J66 1382 aa32.46■■■□□ 2.79
DDX39A-205ENST00000586993 MST1RQ04912 1400 aa32.45■■■□□ 2.79
DDX39A-205ENST00000586993 ADGRB1O14514 1584 aa32.45■■■□□ 2.78
DDX39A-205ENST00000586993 PLEKHH1Q9ULM0 1364 aa32.42■■■□□ 2.78
DDX39A-205ENST00000586993 WAPLQ7Z5K2 1190 aa32.4■■■□□ 2.78
DDX39A-205ENST00000586993 STAC3Q96MF2 364 aa32.39■■■□□ 2.78
DDX39A-205ENST00000586993 SIN3AQ96ST3 1273 aa32.39■■■□□ 2.78
DDX39A-205ENST00000586993 PHLPP1O60346 1717 aa32.39■■■□□ 2.78
DDX39A-205ENST00000586993 BRINP3Q76B58 766 aa32.36■■■□□ 2.77
DDX39A-205ENST00000586993 CDC42BPGQ6DT37 1551 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms