RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 RIMS2Q9UQ26 1411 aa31.52■■■□□ 2.64
RETREG3-204ENST00000586796 PPP1R15AO75807 674 aaPredicted RBP31.5■■■□□ 2.63
RETREG3-204ENST00000586796 HDGFP51858 240 aaKnown RBP31.49■■■□□ 2.63
RETREG3-204ENST00000586796 BCANQ96GW7 911 aa31.48■■■□□ 2.63
RETREG3-204ENST00000586796 KIF1BO60333 1816 aa31.47■■■□□ 2.63
RETREG3-204ENST00000586796 MED14O60244 1454 aa31.46■■■□□ 2.63
RETREG3-204ENST00000586796 ZFYVE9O95405 1425 aa31.46■■■□□ 2.63
RETREG3-204ENST00000586796 ANKRD30BQ9BXX2 1392 aa31.45■■■□□ 2.63
RETREG3-204ENST00000586796 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.45■■■□□ 2.63
RETREG3-204ENST00000586796 RGL3Q3MIN7 710 aa31.43■■■□□ 2.62
RETREG3-204ENST00000586796 IQGAP1P46940 1657 aa31.43■■■□□ 2.62
RETREG3-204ENST00000586796 SLC26A8Q96RN1 970 aa31.37■■■□□ 2.61
RETREG3-204ENST00000586796 ZNF335Q9H4Z2 1342 aaPredicted RBP31.37■■■□□ 2.61
RETREG3-204ENST00000586796 PLEKHG1Q9ULL1 1385 aa31.35■■■□□ 2.61
RETREG3-204ENST00000586796 NEXMIFQ5QGS0 1516 aa31.34■■■□□ 2.61
RETREG3-204ENST00000586796 SPATA31E1Q6ZUB1 1445 aa31.33■■■□□ 2.61
RETREG3-204ENST00000586796 DHX57Q6P158 1386 aaKnown RBP31.33■■■□□ 2.61
RETREG3-204ENST00000586796 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
RETREG3-204ENST00000586796 VGFO15240 615 aaPredicted RBP31.28■■■□□ 2.6
RETREG3-204ENST00000586796 LTBP4Q8N2S1 1624 aa31.22■■■□□ 2.59
RETREG3-204ENST00000586796 PPLO60437 1756 aa31.22■■■□□ 2.59
RETREG3-204ENST00000586796 SIN3AQ96ST3 1273 aa31.21■■■□□ 2.59
RETREG3-204ENST00000586796 ADAMTS13Q76LX8 1427 aa31.21■■■□□ 2.59
RETREG3-204ENST00000586796 CERKQ8TCT0 537 aa31.2■■■□□ 2.59
RETREG3-204ENST00000586796 TBX22Q9Y458 520 aa31.2■■■□□ 2.59
RETREG3-204ENST00000586796 ADGRF5Q8IZF2 1346 aa31.2■■■□□ 2.58
RETREG3-204ENST00000586796 NEUROD1Q13562 356 aa31.19■■■□□ 2.58
RETREG3-204ENST00000586796 KDM2AQ9Y2K7 1162 aa31.16■■■□□ 2.58
RETREG3-204ENST00000586796 SETBP1Q9Y6X0 1596 aa31.16■■■□□ 2.58
RETREG3-204ENST00000586796 DCAF11Q8TEB1 546 aa31.15■■■□□ 2.58
RETREG3-204ENST00000586796 NRXN3Q9Y4C0 1643 aa31.14■■■□□ 2.58
RETREG3-204ENST00000586796 IFT172Q9UG01 1749 aa31.14■■■□□ 2.58
RETREG3-204ENST00000586796 KCNA6P17658 529 aa31.13■■■□□ 2.57
RETREG3-204ENST00000586796 DIP2AQ14689 1571 aa31.13■■■□□ 2.57
RETREG3-204ENST00000586796 STRCP1A6NGW2 1772 aa31.12■■■□□ 2.57
RETREG3-204ENST00000586796 CPS1P31327 1500 aa31.11■■■□□ 2.57
RETREG3-204ENST00000586796 METP08581 1390 aa31.08■■■□□ 2.57
RETREG3-204ENST00000586796 MYOM2P54296 1465 aa31.06■■■□□ 2.56
RETREG3-204ENST00000586796 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
RETREG3-204ENST00000586796 AMOTL2Q9Y2J4 779 aa31.05■■■□□ 2.56
RETREG3-204ENST00000586796 PIK3R4Q99570 1358 aa31.05■■■□□ 2.56
RETREG3-204ENST00000586796 PROSER2Q86WR7 435 aaPredicted RBP31.04■■■□□ 2.56
RETREG3-204ENST00000586796 RBM33Q96EV2 1170 aaKnown RBP31.04■■■□□ 2.56
RETREG3-204ENST00000586796 PIK3C2GO75747 1445 aa31.04■■■□□ 2.56
RETREG3-204ENST00000586796 PTPRUQ92729 1446 aa31.03■■■□□ 2.56
RETREG3-204ENST00000586796 LRRC7Q96NW7 1537 aa31.03■■■□□ 2.56
RETREG3-204ENST00000586796 CHD2O14647 1828 aaKnown RBP31.02■■■□□ 2.56
RETREG3-204ENST00000586796 NWD1Q149M9 1564 aa31.01■■■□□ 2.56
RETREG3-204ENST00000586796 CFAP70Q5T0N1 1121 aa30.99■■■□□ 2.55
RETREG3-204ENST00000586796 L3MBTL2Q969R5 705 aa30.99■■■□□ 2.55
RETREG3-204ENST00000586796 NRXN1Q9ULB1 1477 aa30.99■■■□□ 2.55
RETREG3-204ENST00000586796 STAC3Q96MF2 364 aa30.98■■■□□ 2.55
RETREG3-204ENST00000586796 TMEM132EQ6IEE7 984 aa30.97■■■□□ 2.55
RETREG3-204ENST00000586796 NKTRP30414 1462 aaKnown RBP30.96■■■□□ 2.55
RETREG3-204ENST00000586796 SETD1AO15047 1707 aaKnown RBP30.96■■■□□ 2.55
RETREG3-204ENST00000586796 TMEM94Q12767 1356 aa30.96■■■□□ 2.55
RETREG3-204ENST00000586796 C14orf93Q9H972 538 aaKnown RBP30.96■■■□□ 2.55
RETREG3-204ENST00000586796 CCER1Q8TC90 406 aaPredicted RBP30.95■■■□□ 2.55
RETREG3-204ENST00000586796 IQSEC2Q5JU85 1478 aa30.94■■■□□ 2.54
RETREG3-204ENST00000586796 STK26Q9P289 416 aa30.93■■■□□ 2.54
RETREG3-204ENST00000586796 TONSLQ96HA7 1378 aa30.91■■■□□ 2.54
RETREG3-204ENST00000586796 C14orf37Q86TY3 774 aa30.9■■■□□ 2.54
RETREG3-204ENST00000586796 XRN1Q8IZH2 1706 aaKnown RBP30.9■■■□□ 2.54
RETREG3-204ENST00000586796 UBAP1LF5GYI3 381 aa30.89■■■□□ 2.54
RETREG3-204ENST00000586796 FBXO41Q8TF61 875 aa30.87■■■□□ 2.53
RETREG3-204ENST00000586796 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
RETREG3-204ENST00000586796 LAMC1P11047 1609 aa30.86■■■□□ 2.53
RETREG3-204ENST00000586796 XIRP1Q702N8 1843 aaKnown RBP30.85■■■□□ 2.53
RETREG3-204ENST00000586796 PRAG1Q86YV5 1406 aa30.83■■■□□ 2.53
RETREG3-204ENST00000586796 LRPPRCP42704 1394 aaKnown RBP30.83■■■□□ 2.53
RETREG3-204ENST00000586796 ROBO2Q9HCK4 1378 aa30.83■■■□□ 2.53
RETREG3-204ENST00000586796 YTHDC2Q9H6S0 1430 aaKnown RBP30.82■■■□□ 2.52
RETREG3-204ENST00000586796 CLSPNQ9HAW4 1339 aa30.82■■■□□ 2.52
RETREG3-204ENST00000586796 TOM1O60784 492 aa30.81■■■□□ 2.52
RETREG3-204ENST00000586796 MSH6P52701 1360 aa30.8■■■□□ 2.52
RETREG3-204ENST00000586796 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
RETREG3-204ENST00000586796 PIP4K2BP78356 416 aa30.78■■■□□ 2.52
RETREG3-204ENST00000586796 ILDR1Q86SU0 546 aaPredicted RBP30.78■■■□□ 2.52
RETREG3-204ENST00000586796 PTCH1Q13635 1447 aa30.78■■■□□ 2.52
RETREG3-204ENST00000586796 ABCC11Q96J66 1382 aa30.78■■■□□ 2.52
RETREG3-204ENST00000586796 NCOA3Q9Y6Q9 1424 aa30.76■■■□□ 2.51
RETREG3-204ENST00000586796 NBPF1Q3BBV0 1214 aa30.76■■■□□ 2.51
RETREG3-204ENST00000586796 WAPLQ7Z5K2 1190 aa30.76■■■□□ 2.51
RETREG3-204ENST00000586796 TRAK1Q9UPV9 953 aa30.76■■■□□ 2.51
RETREG3-204ENST00000586796 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
RETREG3-204ENST00000586796 C19orf44Q9H6X5 657 aa30.74■■■□□ 2.51
RETREG3-204ENST00000586796 TECPR2O15040 1411 aa30.73■■■□□ 2.51
RETREG3-204ENST00000586796 NBPF8Q3BBV2 869 aa30.73■■■□□ 2.51
RETREG3-204ENST00000586796 PLEKHH1Q9ULM0 1364 aa30.71■■■□□ 2.51
RETREG3-204ENST00000586796 ATF3P18847 181 aa30.71■■■□□ 2.51
RETREG3-204ENST00000586796 KNDC1Q76NI1 1749 aa30.7■■■□□ 2.5
RETREG3-204ENST00000586796 SAFB2Q14151 953 aaKnown RBP eCLIP30.69■■■□□ 2.5
RETREG3-204ENST00000586796 PRAM1Q96QH2 718 aa30.69■■■□□ 2.5
RETREG3-204ENST00000586796 KIAA1210Q9ULL0 1709 aa30.69■■■□□ 2.5
RETREG3-204ENST00000586796 POGKQ9P215 609 aa30.68■■■□□ 2.5
RETREG3-204ENST00000586796 ADGRL3Q9HAR2 1447 aa30.67■■■□□ 2.5
RETREG3-204ENST00000586796 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.67■■■□□ 2.5
RETREG3-204ENST00000586796 CADPS2Q86UW7 1296 aa30.66■■■□□ 2.5
RETREG3-204ENST00000586796 SIRT1Q96EB6 747 aa30.66■■■□□ 2.5
RETREG3-204ENST00000586796 FAM135BQ49AJ0 1406 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms