RNA–Protein interactions for RNA: ENST00000585435.5

TRMT1-204, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-204ENST00000585435 TRPM2O94759 1503 aa23.55■■□□□ 1.36
TRMT1-204ENST00000585435 MED14O60244 1454 aa23.55■■□□□ 1.36
TRMT1-204ENST00000585435 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
TRMT1-204ENST00000585435 LTKP29376 864 aa23.53■■□□□ 1.36
TRMT1-204ENST00000585435 FOXD1Q16676 465 aa23.53■■□□□ 1.36
TRMT1-204ENST00000585435 KIF1BO60333 1816 aa23.52■■□□□ 1.36
TRMT1-204ENST00000585435 CLTCL1P53675 1640 aa23.51■■□□□ 1.35
TRMT1-204ENST00000585435 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
TRMT1-204ENST00000585435 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
TRMT1-204ENST00000585435 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
TRMT1-204ENST00000585435 RIMS2Q9UQ26 1411 aa23.49■■□□□ 1.35
TRMT1-204ENST00000585435 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
TRMT1-204ENST00000585435 BCANQ96GW7 911 aa23.48■■□□□ 1.35
TRMT1-204ENST00000585435 ZNF335Q9H4Z2 1342 aaPredicted RBP23.47■■□□□ 1.35
TRMT1-204ENST00000585435 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
TRMT1-204ENST00000585435 ZFYVE9O95405 1425 aa23.44■■□□□ 1.34
TRMT1-204ENST00000585435 NUTM2DQ5VT03 806 aaPredicted RBP23.41■■□□□ 1.34
TRMT1-204ENST00000585435 PLEKHG1Q9ULL1 1385 aa23.4■■□□□ 1.34
TRMT1-204ENST00000585435 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
TRMT1-204ENST00000585435 SLC26A8Q96RN1 970 aa23.37■■□□□ 1.33
TRMT1-204ENST00000585435 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
TRMT1-204ENST00000585435 RPGRIP1LQ68CZ1 1315 aa23.35■■□□□ 1.33
TRMT1-204ENST00000585435 HSPA1LP34931 641 aa23.35■■□□□ 1.33
TRMT1-204ENST00000585435 CPS1P31327 1500 aa23.34■■□□□ 1.33
TRMT1-204ENST00000585435 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
TRMT1-204ENST00000585435 NEXMIFQ5QGS0 1516 aa23.32■■□□□ 1.32
TRMT1-204ENST00000585435 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
TRMT1-204ENST00000585435 ANKRD30BQ9BXX2 1392 aa23.31■■□□□ 1.32
TRMT1-204ENST00000585435 TOM1O60784 492 aa23.31■■□□□ 1.32
TRMT1-204ENST00000585435 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
TRMT1-204ENST00000585435 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
TRMT1-204ENST00000585435 TBX22Q9Y458 520 aa23.3■■□□□ 1.32
TRMT1-204ENST00000585435 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
TRMT1-204ENST00000585435 PPLO60437 1756 aa23.28■■□□□ 1.32
TRMT1-204ENST00000585435 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
TRMT1-204ENST00000585435 DIP2AQ14689 1571 aa23.27■■□□□ 1.32
TRMT1-204ENST00000585435 STRCP1A6NGW2 1772 aa23.27■■□□□ 1.32
TRMT1-204ENST00000585435 KCNA6P17658 529 aa23.27■■□□□ 1.32
TRMT1-204ENST00000585435 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
TRMT1-204ENST00000585435 SETBP1Q9Y6X0 1596 aa23.25■■□□□ 1.31
TRMT1-204ENST00000585435 CHD2O14647 1828 aaKnown RBP23.22■■□□□ 1.31
TRMT1-204ENST00000585435 PIK3R4Q99570 1358 aa23.22■■□□□ 1.31
TRMT1-204ENST00000585435 NRXN3Q9Y4C0 1643 aa23.21■■□□□ 1.31
TRMT1-204ENST00000585435 IFT172Q9UG01 1749 aa23.2■■□□□ 1.3
TRMT1-204ENST00000585435 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
TRMT1-204ENST00000585435 NWD1Q149M9 1564 aa23.18■■□□□ 1.3
TRMT1-204ENST00000585435 PROSER2Q86WR7 435 aaPredicted RBP23.18■■□□□ 1.3
TRMT1-204ENST00000585435 NKTRP30414 1462 aaKnown RBP23.17■■□□□ 1.3
TRMT1-204ENST00000585435 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
TRMT1-204ENST00000585435 AMOTL2Q9Y2J4 779 aa23.14■■□□□ 1.29
TRMT1-204ENST00000585435 ALKQ9UM73 1620 aa23.13■■□□□ 1.29
TRMT1-204ENST00000585435 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
TRMT1-204ENST00000585435 METP08581 1390 aa23.13■■□□□ 1.29
TRMT1-204ENST00000585435 TMEM94Q12767 1356 aa23.13■■□□□ 1.29
TRMT1-204ENST00000585435 DHX57Q6P158 1386 aaKnown RBP23.12■■□□□ 1.29
TRMT1-204ENST00000585435 XIRP1Q702N8 1843 aaKnown RBP23.11■■□□□ 1.29
TRMT1-204ENST00000585435 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
TRMT1-204ENST00000585435 STAC3Q96MF2 364 aa23.11■■□□□ 1.29
TRMT1-204ENST00000585435 MYOM2P54296 1465 aa23.11■■□□□ 1.29
TRMT1-204ENST00000585435 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
TRMT1-204ENST00000585435 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
TRMT1-204ENST00000585435 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
TRMT1-204ENST00000585435 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
TRMT1-204ENST00000585435 SETD1AO15047 1707 aaKnown RBP23.08■■□□□ 1.29
TRMT1-204ENST00000585435 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.29
TRMT1-204ENST00000585435 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
TRMT1-204ENST00000585435 MSH6P52701 1360 aa23.05■■□□□ 1.28
TRMT1-204ENST00000585435 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
TRMT1-204ENST00000585435 NEUROD1Q13562 356 aa23.04■■□□□ 1.28
TRMT1-204ENST00000585435 NCOA3Q9Y6Q9 1424 aa23.04■■□□□ 1.28
TRMT1-204ENST00000585435 LAMC1P11047 1609 aa23.04■■□□□ 1.28
TRMT1-204ENST00000585435 C14orf93Q9H972 538 aaKnown RBP23.03■■□□□ 1.28
TRMT1-204ENST00000585435 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
TRMT1-204ENST00000585435 CFAP70Q5T0N1 1121 aa23■■□□□ 1.27
TRMT1-204ENST00000585435 TMEM132EQ6IEE7 984 aa22.99■■□□□ 1.27
TRMT1-204ENST00000585435 STK26Q9P289 416 aa22.99■■□□□ 1.27
TRMT1-204ENST00000585435 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
TRMT1-204ENST00000585435 PTCH1Q13635 1447 aa22.97■■□□□ 1.27
TRMT1-204ENST00000585435 ATF3P18847 181 aa22.96■■□□□ 1.27
TRMT1-204ENST00000585435 LRPPRCP42704 1394 aaKnown RBP22.96■■□□□ 1.27
TRMT1-204ENST00000585435 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
TRMT1-204ENST00000585435 PRAG1Q86YV5 1406 aa22.94■■□□□ 1.26
TRMT1-204ENST00000585435 ROBO2Q9HCK4 1378 aa22.94■■□□□ 1.26
TRMT1-204ENST00000585435 CADPS2Q86UW7 1296 aa22.94■■□□□ 1.26
TRMT1-204ENST00000585435 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
TRMT1-204ENST00000585435 YTHDC2Q9H6S0 1430 aaKnown RBP22.93■■□□□ 1.26
TRMT1-204ENST00000585435 ABCC11Q96J66 1382 aa22.93■■□□□ 1.26
TRMT1-204ENST00000585435 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
TRMT1-204ENST00000585435 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
TRMT1-204ENST00000585435 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
TRMT1-204ENST00000585435 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
TRMT1-204ENST00000585435 TECPR2O15040 1411 aa22.91■■□□□ 1.26
TRMT1-204ENST00000585435 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
TRMT1-204ENST00000585435 DCCP43146 1447 aa22.89■■□□□ 1.25
TRMT1-204ENST00000585435 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
TRMT1-204ENST00000585435 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
TRMT1-204ENST00000585435 SIRT1Q96EB6 747 aa22.87■■□□□ 1.25
TRMT1-204ENST00000585435 KIAA1210Q9ULL0 1709 aa22.87■■□□□ 1.25
TRMT1-204ENST00000585435 ADGRB1O14514 1584 aa22.86■■□□□ 1.25
TRMT1-204ENST00000585435 WAPLQ7Z5K2 1190 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms