RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 DIP2AQ14689 1571 aa25.16■■□□□ 1.62
CSNK1D-225ENST00000584913 LRRC7Q96NW7 1537 aa25.16■■□□□ 1.62
CSNK1D-225ENST00000584913 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
CSNK1D-225ENST00000584913 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
CSNK1D-225ENST00000584913 NKTRP30414 1462 aaKnown RBP25.12■■□□□ 1.61
CSNK1D-225ENST00000584913 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
CSNK1D-225ENST00000584913 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
CSNK1D-225ENST00000584913 PPP1R15AO75807 674 aaPredicted RBP25.08■■□□□ 1.61
CSNK1D-225ENST00000584913 SLC4A1APQ9BWU0 796 aaKnown RBP25.08■■□□□ 1.61
CSNK1D-225ENST00000584913 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
CSNK1D-225ENST00000584913 UBAP1LF5GYI3 381 aa25.07■■□□□ 1.6
CSNK1D-225ENST00000584913 TOM1O60784 492 aa25.07■■□□□ 1.6
CSNK1D-225ENST00000584913 KCNA6P17658 529 aa25.07■■□□□ 1.6
CSNK1D-225ENST00000584913 KIF1BO60333 1816 aa25.07■■□□□ 1.6
CSNK1D-225ENST00000584913 CHGAP10645 457 aaKnown RBP25.05■■□□□ 1.6
CSNK1D-225ENST00000584913 TBX22Q9Y458 520 aa25.05■■□□□ 1.6
CSNK1D-225ENST00000584913 SETBP1Q9Y6X0 1596 aa25.05■■□□□ 1.6
CSNK1D-225ENST00000584913 ADAMTS13Q76LX8 1427 aa25.03■■□□□ 1.6
CSNK1D-225ENST00000584913 CHD2O14647 1828 aaKnown RBP25.02■■□□□ 1.6
CSNK1D-225ENST00000584913 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
CSNK1D-225ENST00000584913 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
CSNK1D-225ENST00000584913 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
CSNK1D-225ENST00000584913 SLC26A8Q96RN1 970 aa25.01■■□□□ 1.59
CSNK1D-225ENST00000584913 NCOA3Q9Y6Q9 1424 aa25■■□□□ 1.59
CSNK1D-225ENST00000584913 NRXN3Q9Y4C0 1643 aa24.98■■□□□ 1.59
CSNK1D-225ENST00000584913 RPGRIP1LQ68CZ1 1315 aa24.97■■□□□ 1.59
CSNK1D-225ENST00000584913 HRCP23327 699 aa24.96■■□□□ 1.59
CSNK1D-225ENST00000584913 BCANQ96GW7 911 aa24.96■■□□□ 1.59
CSNK1D-225ENST00000584913 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
CSNK1D-225ENST00000584913 TMEM94Q12767 1356 aa24.95■■□□□ 1.59
CSNK1D-225ENST00000584913 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.58
CSNK1D-225ENST00000584913 RAB3GAP2Q9H2M9 1393 aa24.94■■□□□ 1.58
CSNK1D-225ENST00000584913 ZNF326Q5BKZ1 582 aaKnown RBP24.93■■□□□ 1.58
CSNK1D-225ENST00000584913 XRN1Q8IZH2 1706 aaKnown RBP24.9■■□□□ 1.58
CSNK1D-225ENST00000584913 PPLO60437 1756 aa24.9■■□□□ 1.58
CSNK1D-225ENST00000584913 VGFO15240 615 aaPredicted RBP24.89■■□□□ 1.58
CSNK1D-225ENST00000584913 PROSER2Q86WR7 435 aaPredicted RBP24.88■■□□□ 1.57
CSNK1D-225ENST00000584913 SPATA31E1Q6ZUB1 1445 aa24.87■■□□□ 1.57
CSNK1D-225ENST00000584913 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
CSNK1D-225ENST00000584913 NUTM2DQ5VT03 806 aaPredicted RBP24.86■■□□□ 1.57
CSNK1D-225ENST00000584913 MSH6P52701 1360 aa24.85■■□□□ 1.57
CSNK1D-225ENST00000584913 FAM135BQ49AJ0 1406 aa24.85■■□□□ 1.57
CSNK1D-225ENST00000584913 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
CSNK1D-225ENST00000584913 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
CSNK1D-225ENST00000584913 ANKRD30BQ9BXX2 1392 aa24.83■■□□□ 1.57
CSNK1D-225ENST00000584913 PIP4K2BP78356 416 aa24.83■■□□□ 1.57
CSNK1D-225ENST00000584913 PTPRUQ92729 1446 aa24.83■■□□□ 1.57
CSNK1D-225ENST00000584913 DCCP43146 1447 aa24.81■■□□□ 1.56
CSNK1D-225ENST00000584913 FOXD1Q16676 465 aa24.81■■□□□ 1.56
CSNK1D-225ENST00000584913 SCAF1Q9H7N4 1312 aaKnown RBP24.8■■□□□ 1.56
CSNK1D-225ENST00000584913 AMOTL2Q9Y2J4 779 aa24.79■■□□□ 1.56
CSNK1D-225ENST00000584913 METP08581 1390 aa24.78■■□□□ 1.56
CSNK1D-225ENST00000584913 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
CSNK1D-225ENST00000584913 HSPA1LP34931 641 aa24.77■■□□□ 1.56
CSNK1D-225ENST00000584913 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
CSNK1D-225ENST00000584913 MYOM2P54296 1465 aa24.74■■□□□ 1.55
CSNK1D-225ENST00000584913 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-225ENST00000584913 ROBO1Q9Y6N7 1651 aa24.72■■□□□ 1.55
CSNK1D-225ENST00000584913 CADPS2Q86UW7 1296 aa24.72■■□□□ 1.55
CSNK1D-225ENST00000584913 SENP3Q9H4L4 574 aaPredicted RBP24.72■■□□□ 1.55
CSNK1D-225ENST00000584913 NRXN1Q9ULB1 1477 aa24.71■■□□□ 1.55
CSNK1D-225ENST00000584913 PIK3C2GO75747 1445 aa24.71■■□□□ 1.55
CSNK1D-225ENST00000584913 ADGRL3Q9HAR2 1447 aa24.69■■□□□ 1.54
CSNK1D-225ENST00000584913 LAMC1P11047 1609 aa24.69■■□□□ 1.54
CSNK1D-225ENST00000584913 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
CSNK1D-225ENST00000584913 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
CSNK1D-225ENST00000584913 TECPR2O15040 1411 aa24.67■■□□□ 1.54
CSNK1D-225ENST00000584913 STAC3Q96MF2 364 aa24.66■■□□□ 1.54
CSNK1D-225ENST00000584913 C14orf37Q86TY3 774 aa24.65■■□□□ 1.54
CSNK1D-225ENST00000584913 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
CSNK1D-225ENST00000584913 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.54
CSNK1D-225ENST00000584913 ATF3P18847 181 aa24.64■■□□□ 1.54
CSNK1D-225ENST00000584913 RGL3Q3MIN7 710 aa24.64■■□□□ 1.54
CSNK1D-225ENST00000584913 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.53
CSNK1D-225ENST00000584913 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
CSNK1D-225ENST00000584913 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
CSNK1D-225ENST00000584913 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
CSNK1D-225ENST00000584913 LRPPRCP42704 1394 aaKnown RBP24.6■■□□□ 1.53
CSNK1D-225ENST00000584913 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
CSNK1D-225ENST00000584913 ABCC11Q96J66 1382 aa24.59■■□□□ 1.53
CSNK1D-225ENST00000584913 ROBO2Q9HCK4 1378 aa24.59■■□□□ 1.53
CSNK1D-225ENST00000584913 MST1RQ04912 1400 aa24.59■■□□□ 1.53
CSNK1D-225ENST00000584913 PHLPP1O60346 1717 aa24.57■■□□□ 1.52
CSNK1D-225ENST00000584913 CDC42BPGQ6DT37 1551 aa24.56■■□□□ 1.52
CSNK1D-225ENST00000584913 COL16A1Q07092 1604 aaPredicted RBP24.55■■□□□ 1.52
CSNK1D-225ENST00000584913 C14orf93Q9H972 538 aaKnown RBP24.55■■□□□ 1.52
CSNK1D-225ENST00000584913 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
CSNK1D-225ENST00000584913 YTHDC2Q9H6S0 1430 aaKnown RBP24.52■■□□□ 1.52
CSNK1D-225ENST00000584913 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
CSNK1D-225ENST00000584913 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
CSNK1D-225ENST00000584913 BRINP3Q76B58 766 aa24.5■■□□□ 1.51
CSNK1D-225ENST00000584913 JCADQ9P266 1359 aa24.5■■□□□ 1.51
CSNK1D-225ENST00000584913 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
CSNK1D-225ENST00000584913 ADGRB1O14514 1584 aa24.48■■□□□ 1.51
CSNK1D-225ENST00000584913 C1orf167Q5SNV9 1468 aa24.48■■□□□ 1.51
CSNK1D-225ENST00000584913 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
CSNK1D-225ENST00000584913 KIAA1210Q9ULL0 1709 aa24.42■■□□□ 1.5
CSNK1D-225ENST00000584913 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
CSNK1D-225ENST00000584913 DCAF11Q8TEB1 546 aa24.42■■□□□ 1.5
CSNK1D-225ENST00000584913 SPATA31A6Q5VVP1 1343 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms