RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
CTC1-213ENST00000584842 LTKP29376 864 aa11.86□□□□□ -0.51
CTC1-213ENST00000584842 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTC1-213ENST00000584842 BCANQ96GW7 911 aa11.86□□□□□ -0.51
CTC1-213ENST00000584842 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
CTC1-213ENST00000584842 RAB3GAP2Q9H2M9 1393 aa11.85□□□□□ -0.51
CTC1-213ENST00000584842 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
CTC1-213ENST00000584842 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
CTC1-213ENST00000584842 PLEKHG1Q9ULL1 1385 aa11.84□□□□□ -0.51
CTC1-213ENST00000584842 STRCP1A6NGW2 1772 aa11.84□□□□□ -0.51
CTC1-213ENST00000584842 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
CTC1-213ENST00000584842 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
CTC1-213ENST00000584842 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
CTC1-213ENST00000584842 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
CTC1-213ENST00000584842 PPLO60437 1756 aa11.8□□□□□ -0.52
CTC1-213ENST00000584842 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
CTC1-213ENST00000584842 NEXMIFQ5QGS0 1516 aa11.8□□□□□ -0.52
CTC1-213ENST00000584842 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
CTC1-213ENST00000584842 SLC26A8Q96RN1 970 aa11.79□□□□□ -0.52
CTC1-213ENST00000584842 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
CTC1-213ENST00000584842 LRRC7Q96NW7 1537 aa11.78□□□□□ -0.52
CTC1-213ENST00000584842 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
CTC1-213ENST00000584842 UBAP1LF5GYI3 381 aa11.77□□□□□ -0.53
CTC1-213ENST00000584842 HRCP23327 699 aa11.77□□□□□ -0.53
CTC1-213ENST00000584842 FOXD1Q16676 465 aa11.77□□□□□ -0.53
CTC1-213ENST00000584842 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
CTC1-213ENST00000584842 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
CTC1-213ENST00000584842 KCNA6P17658 529 aa11.76□□□□□ -0.53
CTC1-213ENST00000584842 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
CTC1-213ENST00000584842 IFT172Q9UG01 1749 aa11.76□□□□□ -0.53
CTC1-213ENST00000584842 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
CTC1-213ENST00000584842 PIK3R4Q99570 1358 aa11.76□□□□□ -0.53
CTC1-213ENST00000584842 TOM1O60784 492 aa11.75□□□□□ -0.53
CTC1-213ENST00000584842 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
CTC1-213ENST00000584842 ADAMTS13Q76LX8 1427 aa11.75□□□□□ -0.53
CTC1-213ENST00000584842 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
CTC1-213ENST00000584842 XRN1Q8IZH2 1706 aaKnown RBP11.72□□□□□ -0.53
CTC1-213ENST00000584842 SPATA31E1Q6ZUB1 1445 aa11.72□□□□□ -0.53
CTC1-213ENST00000584842 ANKRD30BQ9BXX2 1392 aa11.72□□□□□ -0.53
CTC1-213ENST00000584842 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
CTC1-213ENST00000584842 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
CTC1-213ENST00000584842 TMEM94Q12767 1356 aa11.71□□□□□ -0.53
CTC1-213ENST00000584842 SETD1AO15047 1707 aaKnown RBP11.71□□□□□ -0.54
CTC1-213ENST00000584842 LAMC1P11047 1609 aa11.71□□□□□ -0.54
CTC1-213ENST00000584842 MSH6P52701 1360 aa11.7□□□□□ -0.54
CTC1-213ENST00000584842 RGL3Q3MIN7 710 aa11.7□□□□□ -0.54
CTC1-213ENST00000584842 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
CTC1-213ENST00000584842 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
CTC1-213ENST00000584842 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
CTC1-213ENST00000584842 PIP4K2BP78356 416 aa11.68□□□□□ -0.54
CTC1-213ENST00000584842 MYOM2P54296 1465 aa11.68□□□□□ -0.54
CTC1-213ENST00000584842 AMOTL2Q9Y2J4 779 aa11.67□□□□□ -0.54
CTC1-213ENST00000584842 METP08581 1390 aa11.67□□□□□ -0.54
CTC1-213ENST00000584842 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
CTC1-213ENST00000584842 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
CTC1-213ENST00000584842 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
CTC1-213ENST00000584842 PIK3C2GO75747 1445 aa11.65□□□□□ -0.54
CTC1-213ENST00000584842 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
CTC1-213ENST00000584842 KNDC1Q76NI1 1749 aa11.65□□□□□ -0.54
CTC1-213ENST00000584842 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
CTC1-213ENST00000584842 ROBO1Q9Y6N7 1651 aa11.64□□□□□ -0.55
CTC1-213ENST00000584842 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
CTC1-213ENST00000584842 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
CTC1-213ENST00000584842 DCCP43146 1447 aa11.63□□□□□ -0.55
CTC1-213ENST00000584842 PRAG1Q86YV5 1406 aa11.63□□□□□ -0.55
CTC1-213ENST00000584842 ATF3P18847 181 aa11.62□□□□□ -0.55
CTC1-213ENST00000584842 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
CTC1-213ENST00000584842 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
CTC1-213ENST00000584842 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
CTC1-213ENST00000584842 C19orf44Q9H6X5 657 aa11.61□□□□□ -0.55
CTC1-213ENST00000584842 FAM135BQ49AJ0 1406 aa11.6□□□□□ -0.55
CTC1-213ENST00000584842 ADGRL3Q9HAR2 1447 aa11.6□□□□□ -0.55
CTC1-213ENST00000584842 HSPA1LP34931 641 aa11.59□□□□□ -0.55
CTC1-213ENST00000584842 PHLPP1O60346 1717 aa11.59□□□□□ -0.55
CTC1-213ENST00000584842 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
CTC1-213ENST00000584842 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
CTC1-213ENST00000584842 DCAF11Q8TEB1 546 aa11.58□□□□□ -0.56
CTC1-213ENST00000584842 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
CTC1-213ENST00000584842 TECPR2O15040 1411 aa11.58□□□□□ -0.56
CTC1-213ENST00000584842 YTHDC2Q9H6S0 1430 aaKnown RBP11.58□□□□□ -0.56
CTC1-213ENST00000584842 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
CTC1-213ENST00000584842 DHX57Q6P158 1386 aaKnown RBP11.57□□□□□ -0.56
CTC1-213ENST00000584842 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
CTC1-213ENST00000584842 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
CTC1-213ENST00000584842 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
CTC1-213ENST00000584842 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
CTC1-213ENST00000584842 STK26Q9P289 416 aa11.56□□□□□ -0.56
CTC1-213ENST00000584842 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
CTC1-213ENST00000584842 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
CTC1-213ENST00000584842 MST1RQ04912 1400 aa11.54□□□□□ -0.56
CTC1-213ENST00000584842 AHDC1Q5TGY3 1603 aaPredicted RBP11.54□□□□□ -0.56
CTC1-213ENST00000584842 TMEM132EQ6IEE7 984 aa11.54□□□□□ -0.56
CTC1-213ENST00000584842 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
CTC1-213ENST00000584842 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
CTC1-213ENST00000584842 NHSL1Q5SYE7 1610 aa11.53□□□□□ -0.56
CTC1-213ENST00000584842 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
CTC1-213ENST00000584842 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.57
CTC1-213ENST00000584842 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
CTC1-213ENST00000584842 FMN2Q9NZ56 1722 aa11.52□□□□□ -0.57
CTC1-213ENST00000584842 SIRT1Q96EB6 747 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms