RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PIP4K2BP78356 416 aa27.27■■□□□ 1.96
SRSF1-208ENST00000584773 SCAF1Q9H7N4 1312 aaKnown RBP27.27■■□□□ 1.96
SRSF1-208ENST00000584773 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
SRSF1-208ENST00000584773 XIRP1Q702N8 1843 aaKnown RBP27.25■■□□□ 1.95
SRSF1-208ENST00000584773 NUTM2DQ5VT03 806 aaPredicted RBP27.25■■□□□ 1.95
SRSF1-208ENST00000584773 BCANQ96GW7 911 aa27.23■■□□□ 1.95
SRSF1-208ENST00000584773 TOM1O60784 492 aa27.21■■□□□ 1.95
SRSF1-208ENST00000584773 PPP1R15AO75807 674 aaPredicted RBP27.21■■□□□ 1.95
SRSF1-208ENST00000584773 PLEKHG1Q9ULL1 1385 aa27.21■■□□□ 1.95
SRSF1-208ENST00000584773 TRIM52Q96A61 297 aa27.19■■□□□ 1.94
SRSF1-208ENST00000584773 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
SRSF1-208ENST00000584773 RBM33Q96EV2 1170 aaKnown RBP27.16■■□□□ 1.94
SRSF1-208ENST00000584773 KCNA6P17658 529 aa27.16■■□□□ 1.94
SRSF1-208ENST00000584773 NWD1Q149M9 1564 aa27.16■■□□□ 1.94
SRSF1-208ENST00000584773 HSPA1LP34931 641 aa27.15■■□□□ 1.94
SRSF1-208ENST00000584773 TRPM2O94759 1503 aa27.14■■□□□ 1.93
SRSF1-208ENST00000584773 TMEM94Q12767 1356 aa27.13■■□□□ 1.93
SRSF1-208ENST00000584773 HDGFP51858 240 aaKnown RBP27.12■■□□□ 1.93
SRSF1-208ENST00000584773 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.12■■□□□ 1.93
SRSF1-208ENST00000584773 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
SRSF1-208ENST00000584773 ADAMTS13Q76LX8 1427 aa27.11■■□□□ 1.93
SRSF1-208ENST00000584773 PROSER2Q86WR7 435 aaPredicted RBP27.09■■□□□ 1.93
SRSF1-208ENST00000584773 DISP3Q9P2K9 1392 aa27.08■■□□□ 1.93
SRSF1-208ENST00000584773 SLC4A1APQ9BWU0 796 aaKnown RBP27.08■■□□□ 1.93
SRSF1-208ENST00000584773 NKTRP30414 1462 aaKnown RBP27.07■■□□□ 1.92
SRSF1-208ENST00000584773 ZNF326Q5BKZ1 582 aaKnown RBP27.07■■□□□ 1.92
SRSF1-208ENST00000584773 FOXD1Q16676 465 aa27.06■■□□□ 1.92
SRSF1-208ENST00000584773 KIF1BO60333 1816 aa27.05■■□□□ 1.92
SRSF1-208ENST00000584773 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
SRSF1-208ENST00000584773 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
SRSF1-208ENST00000584773 DIP2AQ14689 1571 aa27.04■■□□□ 1.92
SRSF1-208ENST00000584773 NEXMIFQ5QGS0 1516 aa27.03■■□□□ 1.92
SRSF1-208ENST00000584773 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
SRSF1-208ENST00000584773 SETBP1Q9Y6X0 1596 aa26.98■■□□□ 1.91
SRSF1-208ENST00000584773 ILDR2Q71H61 639 aa26.93■■□□□ 1.9
SRSF1-208ENST00000584773 MPHOSPH9Q99550 1183 aa26.93■■□□□ 1.9
SRSF1-208ENST00000584773 MSH6P52701 1360 aa26.93■■□□□ 1.9
SRSF1-208ENST00000584773 PIK3R4Q99570 1358 aa26.93■■□□□ 1.9
SRSF1-208ENST00000584773 SETD5Q9C0A6 1442 aa26.92■■□□□ 1.9
SRSF1-208ENST00000584773 METP08581 1390 aa26.92■■□□□ 1.9
SRSF1-208ENST00000584773 AMOTL2Q9Y2J4 779 aa26.91■■□□□ 1.9
SRSF1-208ENST00000584773 ROBO1Q9Y6N7 1651 aa26.91■■□□□ 1.9
SRSF1-208ENST00000584773 MED1Q15648 1581 aaPredicted RBP26.91■■□□□ 1.9
SRSF1-208ENST00000584773 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
SRSF1-208ENST00000584773 FAM135BQ49AJ0 1406 aa26.89■■□□□ 1.89
SRSF1-208ENST00000584773 PPLO60437 1756 aa26.87■■□□□ 1.89
SRSF1-208ENST00000584773 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
SRSF1-208ENST00000584773 RAB3GAP2Q9H2M9 1393 aa26.86■■□□□ 1.89
SRSF1-208ENST00000584773 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.86■■□□□ 1.89
SRSF1-208ENST00000584773 CCDC144AA2RUR9 1427 aa26.85■■□□□ 1.89
SRSF1-208ENST00000584773 SETD1AO15047 1707 aaKnown RBP26.84■■□□□ 1.89
SRSF1-208ENST00000584773 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
SRSF1-208ENST00000584773 SLAIN2Q9P270 581 aa26.82■■□□□ 1.88
SRSF1-208ENST00000584773 SPATA31E1Q6ZUB1 1445 aa26.79■■□□□ 1.88
SRSF1-208ENST00000584773 VGFO15240 615 aaPredicted RBP26.79■■□□□ 1.88
SRSF1-208ENST00000584773 RGL3Q3MIN7 710 aa26.79■■□□□ 1.88
SRSF1-208ENST00000584773 RPGRIP1LQ68CZ1 1315 aa26.79■■□□□ 1.88
SRSF1-208ENST00000584773 C19orf44Q9H6X5 657 aa26.77■■□□□ 1.88
SRSF1-208ENST00000584773 IFT172Q9UG01 1749 aa26.76■■□□□ 1.88
SRSF1-208ENST00000584773 ADGRF5Q8IZF2 1346 aa26.75■■□□□ 1.87
SRSF1-208ENST00000584773 PHLPP1O60346 1717 aa26.75■■□□□ 1.87
SRSF1-208ENST00000584773 ATF3P18847 181 aa26.73■■□□□ 1.87
SRSF1-208ENST00000584773 NALCNQ8IZF0 1738 aa26.73■■□□□ 1.87
SRSF1-208ENST00000584773 CADPS2Q86UW7 1296 aa26.72■■□□□ 1.87
SRSF1-208ENST00000584773 ROBO2Q9HCK4 1378 aa26.7■■□□□ 1.86
SRSF1-208ENST00000584773 COL16A1Q07092 1604 aaPredicted RBP26.67■■□□□ 1.86
SRSF1-208ENST00000584773 DCCP43146 1447 aa26.67■■□□□ 1.86
SRSF1-208ENST00000584773 ADGRL3Q9HAR2 1447 aa26.67■■□□□ 1.86
SRSF1-208ENST00000584773 ACIN1Q9UKV3 1341 aaKnown RBP26.67■■□□□ 1.86
SRSF1-208ENST00000584773 PTCH1Q13635 1447 aa26.66■■□□□ 1.86
SRSF1-208ENST00000584773 MST1RQ04912 1400 aa26.66■■□□□ 1.86
SRSF1-208ENST00000584773 PHF23Q9BUL5 403 aaPredicted RBP26.65■■□□□ 1.86
SRSF1-208ENST00000584773 ANKRD30BQ9BXX2 1392 aa26.64■■□□□ 1.86
SRSF1-208ENST00000584773 ASXL1Q8IXJ9 1541 aa26.64■■□□□ 1.85
SRSF1-208ENST00000584773 BRINP3Q76B58 766 aa26.64■■□□□ 1.85
SRSF1-208ENST00000584773 AHDC1Q5TGY3 1603 aaPredicted RBP26.62■■□□□ 1.85
SRSF1-208ENST00000584773 PIK3C2GO75747 1445 aa26.61■■□□□ 1.85
SRSF1-208ENST00000584773 PRAG1Q86YV5 1406 aa26.6■■□□□ 1.85
SRSF1-208ENST00000584773 TMEM132EQ6IEE7 984 aa26.59■■□□□ 1.85
SRSF1-208ENST00000584773 STK26Q9P289 416 aa26.59■■□□□ 1.85
SRSF1-208ENST00000584773 SOCS7O14512 581 aa26.58■■□□□ 1.85
SRSF1-208ENST00000584773 JCADQ9P266 1359 aa26.57■■□□□ 1.84
SRSF1-208ENST00000584773 RGS17Q9UGC6 210 aaPredicted RBP26.56■■□□□ 1.84
SRSF1-208ENST00000584773 DDX17Q92841 729 aaKnown RBP26.55■■□□□ 1.84
SRSF1-208ENST00000584773 NHSL1Q5SYE7 1610 aa26.54■■□□□ 1.84
SRSF1-208ENST00000584773 MYOM2P54296 1465 aa26.53■■□□□ 1.84
SRSF1-208ENST00000584773 NRXN1Q9ULB1 1477 aa26.53■■□□□ 1.84
SRSF1-208ENST00000584773 HRCP23327 699 aa26.53■■□□□ 1.84
SRSF1-208ENST00000584773 LRPPRCP42704 1394 aaKnown RBP26.53■■□□□ 1.84
SRSF1-208ENST00000584773 C1orf167Q5SNV9 1468 aa26.53■■□□□ 1.84
SRSF1-208ENST00000584773 KNDC1Q76NI1 1749 aa26.52■■□□□ 1.84
SRSF1-208ENST00000584773 WAPLQ7Z5K2 1190 aa26.52■■□□□ 1.84
SRSF1-208ENST00000584773 PLEKHH1Q9ULM0 1364 aa26.52■■□□□ 1.84
SRSF1-208ENST00000584773 CFAP70Q5T0N1 1121 aa26.51■■□□□ 1.83
SRSF1-208ENST00000584773 TECPR2O15040 1411 aa26.5■■□□□ 1.83
SRSF1-208ENST00000584773 LRP6O75581 1613 aa26.5■■□□□ 1.83
SRSF1-208ENST00000584773 SHPRHQ149N8 1683 aa26.49■■□□□ 1.83
SRSF1-208ENST00000584773 YTHDC2Q9H6S0 1430 aaKnown RBP26.49■■□□□ 1.83
SRSF1-208ENST00000584773 C14orf93Q9H972 538 aaKnown RBP26.48■■□□□ 1.83
SRSF1-208ENST00000584773 ORAI2Q96SN7 254 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms