RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 LTKP29376 864 aa23.65■■□□□ 1.38
CSNK1D-223ENST00000584472 MYO5BQ9ULV0 1848 aa23.61■■□□□ 1.37
CSNK1D-223ENST00000584472 TOM1O60784 492 aa23.61■■□□□ 1.37
CSNK1D-223ENST00000584472 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
CSNK1D-223ENST00000584472 STRCP1A6NGW2 1772 aa23.6■■□□□ 1.37
CSNK1D-223ENST00000584472 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
CSNK1D-223ENST00000584472 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
CSNK1D-223ENST00000584472 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
CSNK1D-223ENST00000584472 HDGFP51858 240 aaKnown RBP23.54■■□□□ 1.36
CSNK1D-223ENST00000584472 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
CSNK1D-223ENST00000584472 KIF1BO60333 1816 aa23.53■■□□□ 1.36
CSNK1D-223ENST00000584472 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
CSNK1D-223ENST00000584472 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
CSNK1D-223ENST00000584472 PLEKHG1Q9ULL1 1385 aa23.51■■□□□ 1.35
CSNK1D-223ENST00000584472 FOXD1Q16676 465 aa23.5■■□□□ 1.35
CSNK1D-223ENST00000584472 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
CSNK1D-223ENST00000584472 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
CSNK1D-223ENST00000584472 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
CSNK1D-223ENST00000584472 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
CSNK1D-223ENST00000584472 KCNA6P17658 529 aa23.47■■□□□ 1.35
CSNK1D-223ENST00000584472 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
CSNK1D-223ENST00000584472 PPP1R15AO75807 674 aaPredicted RBP23.44■■□□□ 1.34
CSNK1D-223ENST00000584472 XIRP1Q702N8 1843 aaKnown RBP23.43■■□□□ 1.34
CSNK1D-223ENST00000584472 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
CSNK1D-223ENST00000584472 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
CSNK1D-223ENST00000584472 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
CSNK1D-223ENST00000584472 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
CSNK1D-223ENST00000584472 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
CSNK1D-223ENST00000584472 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
CSNK1D-223ENST00000584472 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
CSNK1D-223ENST00000584472 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
CSNK1D-223ENST00000584472 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
CSNK1D-223ENST00000584472 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
CSNK1D-223ENST00000584472 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
CSNK1D-223ENST00000584472 HSPA1LP34931 641 aa23.38■■□□□ 1.33
CSNK1D-223ENST00000584472 TMEM94Q12767 1356 aa23.38■■□□□ 1.33
CSNK1D-223ENST00000584472 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
CSNK1D-223ENST00000584472 NCOA3Q9Y6Q9 1424 aa23.37■■□□□ 1.33
CSNK1D-223ENST00000584472 CHD2O14647 1828 aaKnown RBP23.37■■□□□ 1.33
CSNK1D-223ENST00000584472 SETBP1Q9Y6X0 1596 aa23.36■■□□□ 1.33
CSNK1D-223ENST00000584472 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
CSNK1D-223ENST00000584472 PPLO60437 1756 aa23.35■■□□□ 1.33
CSNK1D-223ENST00000584472 BCANQ96GW7 911 aa23.35■■□□□ 1.33
CSNK1D-223ENST00000584472 NUTM2DQ5VT03 806 aaPredicted RBP23.34■■□□□ 1.33
CSNK1D-223ENST00000584472 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
CSNK1D-223ENST00000584472 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.32
CSNK1D-223ENST00000584472 IFT172Q9UG01 1749 aa23.31■■□□□ 1.32
CSNK1D-223ENST00000584472 VGFO15240 615 aaPredicted RBP23.31■■□□□ 1.32
CSNK1D-223ENST00000584472 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
CSNK1D-223ENST00000584472 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
CSNK1D-223ENST00000584472 MSH6P52701 1360 aa23.27■■□□□ 1.32
CSNK1D-223ENST00000584472 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
CSNK1D-223ENST00000584472 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
CSNK1D-223ENST00000584472 MED1Q15648 1581 aaPredicted RBP23.25■■□□□ 1.31
CSNK1D-223ENST00000584472 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
CSNK1D-223ENST00000584472 MYOM2P54296 1465 aa23.22■■□□□ 1.31
CSNK1D-223ENST00000584472 SETD1AO15047 1707 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-223ENST00000584472 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
CSNK1D-223ENST00000584472 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-223ENST00000584472 ROBO1Q9Y6N7 1651 aa23.19■■□□□ 1.3
CSNK1D-223ENST00000584472 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
CSNK1D-223ENST00000584472 NRXN1Q9ULB1 1477 aa23.18■■□□□ 1.3
CSNK1D-223ENST00000584472 ADGRF5Q8IZF2 1346 aa23.18■■□□□ 1.3
CSNK1D-223ENST00000584472 PIK3C2GO75747 1445 aa23.17■■□□□ 1.3
CSNK1D-223ENST00000584472 DCCP43146 1447 aa23.17■■□□□ 1.3
CSNK1D-223ENST00000584472 METP08581 1390 aa23.17■■□□□ 1.3
CSNK1D-223ENST00000584472 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
CSNK1D-223ENST00000584472 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
CSNK1D-223ENST00000584472 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
CSNK1D-223ENST00000584472 AMOTL2Q9Y2J4 779 aa23.15■■□□□ 1.3
CSNK1D-223ENST00000584472 SOCS7O14512 581 aa23.14■■□□□ 1.29
CSNK1D-223ENST00000584472 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
CSNK1D-223ENST00000584472 STAC3Q96MF2 364 aa23.14■■□□□ 1.29
CSNK1D-223ENST00000584472 LAMC1P11047 1609 aa23.14■■□□□ 1.29
CSNK1D-223ENST00000584472 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
CSNK1D-223ENST00000584472 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
CSNK1D-223ENST00000584472 NEUROD1Q13562 356 aa23.12■■□□□ 1.29
CSNK1D-223ENST00000584472 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
CSNK1D-223ENST00000584472 PTCH1Q13635 1447 aa23.08■■□□□ 1.29
CSNK1D-223ENST00000584472 ATF3P18847 181 aa23.07■■□□□ 1.28
CSNK1D-223ENST00000584472 C14orf37Q86TY3 774 aa23.07■■□□□ 1.28
CSNK1D-223ENST00000584472 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
CSNK1D-223ENST00000584472 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
CSNK1D-223ENST00000584472 ASXL1Q8IXJ9 1541 aa23.06■■□□□ 1.28
CSNK1D-223ENST00000584472 AHDC1Q5TGY3 1603 aaPredicted RBP23.05■■□□□ 1.28
CSNK1D-223ENST00000584472 ADGRL3Q9HAR2 1447 aa23.04■■□□□ 1.28
CSNK1D-223ENST00000584472 PHLPP1O60346 1717 aa23.04■■□□□ 1.28
CSNK1D-223ENST00000584472 TECPR2O15040 1411 aa23.03■■□□□ 1.28
CSNK1D-223ENST00000584472 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
CSNK1D-223ENST00000584472 KNDC1Q76NI1 1749 aa23.02■■□□□ 1.28
CSNK1D-223ENST00000584472 COL16A1Q07092 1604 aaPredicted RBP23.02■■□□□ 1.28
CSNK1D-223ENST00000584472 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
CSNK1D-223ENST00000584472 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
CSNK1D-223ENST00000584472 JCADQ9P266 1359 aa23.01■■□□□ 1.27
CSNK1D-223ENST00000584472 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
CSNK1D-223ENST00000584472 ABCC11Q96J66 1382 aa23■■□□□ 1.27
CSNK1D-223ENST00000584472 ROBO2Q9HCK4 1378 aa23■■□□□ 1.27
CSNK1D-223ENST00000584472 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
CSNK1D-223ENST00000584472 CFAP70Q5T0N1 1121 aa22.99■■□□□ 1.27
CSNK1D-223ENST00000584472 MST1RQ04912 1400 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms