RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
TSEN54-211ENST00000583818 TRPM2O94759 1503 aa25.17■■□□□ 1.62
TSEN54-211ENST00000583818 MPHOSPH9Q99550 1183 aa25.15■■□□□ 1.62
TSEN54-211ENST00000583818 STRCP1A6NGW2 1772 aa25.15■■□□□ 1.62
TSEN54-211ENST00000583818 BCANQ96GW7 911 aa25.14■■□□□ 1.62
TSEN54-211ENST00000583818 SLC26A8Q96RN1 970 aa25.14■■□□□ 1.62
TSEN54-211ENST00000583818 PPP1R15AO75807 674 aaPredicted RBP25.13■■□□□ 1.61
TSEN54-211ENST00000583818 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
TSEN54-211ENST00000583818 CPS1P31327 1500 aa25.08■■□□□ 1.61
TSEN54-211ENST00000583818 KIF1BO60333 1816 aa25.07■■□□□ 1.6
TSEN54-211ENST00000583818 PLEKHG1Q9ULL1 1385 aa25.06■■□□□ 1.6
TSEN54-211ENST00000583818 HDGFP51858 240 aaKnown RBP25.04■■□□□ 1.6
TSEN54-211ENST00000583818 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.04■■□□□ 1.6
TSEN54-211ENST00000583818 IQSEC2Q5JU85 1478 aa25.03■■□□□ 1.6
TSEN54-211ENST00000583818 NEXMIFQ5QGS0 1516 aa25.01■■□□□ 1.59
TSEN54-211ENST00000583818 LRRC7Q96NW7 1537 aa25.01■■□□□ 1.59
TSEN54-211ENST00000583818 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
TSEN54-211ENST00000583818 ADAMTS13Q76LX8 1427 aa24.99■■□□□ 1.59
TSEN54-211ENST00000583818 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
TSEN54-211ENST00000583818 RBM33Q96EV2 1170 aaKnown RBP24.97■■□□□ 1.59
TSEN54-211ENST00000583818 NRXN3Q9Y4C0 1643 aa24.95■■□□□ 1.58
TSEN54-211ENST00000583818 KCNA6P17658 529 aa24.95■■□□□ 1.58
TSEN54-211ENST00000583818 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
TSEN54-211ENST00000583818 RGL3Q3MIN7 710 aa24.94■■□□□ 1.58
TSEN54-211ENST00000583818 XIRP1Q702N8 1843 aaKnown RBP24.93■■□□□ 1.58
TSEN54-211ENST00000583818 TBX22Q9Y458 520 aa24.93■■□□□ 1.58
TSEN54-211ENST00000583818 NWD1Q149M9 1564 aa24.92■■□□□ 1.58
TSEN54-211ENST00000583818 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
TSEN54-211ENST00000583818 DIP2AQ14689 1571 aa24.9■■□□□ 1.58
TSEN54-211ENST00000583818 PROSER2Q86WR7 435 aaPredicted RBP24.9■■□□□ 1.58
TSEN54-211ENST00000583818 SCAF1Q9H7N4 1312 aaKnown RBP24.89■■□□□ 1.58
TSEN54-211ENST00000583818 SETBP1Q9Y6X0 1596 aa24.89■■□□□ 1.58
TSEN54-211ENST00000583818 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.58
TSEN54-211ENST00000583818 HRCP23327 699 aa24.89■■□□□ 1.58
TSEN54-211ENST00000583818 PIP4K2BP78356 416 aa24.89■■□□□ 1.58
TSEN54-211ENST00000583818 PPLO60437 1756 aa24.89■■□□□ 1.57
TSEN54-211ENST00000583818 TMEM94Q12767 1356 aa24.89■■□□□ 1.57
TSEN54-211ENST00000583818 ALKQ9UM73 1620 aa24.87■■□□□ 1.57
TSEN54-211ENST00000583818 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
TSEN54-211ENST00000583818 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
TSEN54-211ENST00000583818 METP08581 1390 aa24.85■■□□□ 1.57
TSEN54-211ENST00000583818 RPGRIP1LQ68CZ1 1315 aa24.85■■□□□ 1.57
TSEN54-211ENST00000583818 ANKRD30BQ9BXX2 1392 aa24.84■■□□□ 1.57
TSEN54-211ENST00000583818 VGFO15240 615 aaPredicted RBP24.84■■□□□ 1.57
TSEN54-211ENST00000583818 TOM1O60784 492 aa24.84■■□□□ 1.57
TSEN54-211ENST00000583818 AMOTL2Q9Y2J4 779 aa24.82■■□□□ 1.56
TSEN54-211ENST00000583818 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
TSEN54-211ENST00000583818 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
TSEN54-211ENST00000583818 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
TSEN54-211ENST00000583818 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
TSEN54-211ENST00000583818 XRN1Q8IZH2 1706 aaKnown RBP24.78■■□□□ 1.56
TSEN54-211ENST00000583818 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
TSEN54-211ENST00000583818 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
TSEN54-211ENST00000583818 MSH6P52701 1360 aa24.71■■□□□ 1.55
TSEN54-211ENST00000583818 HSPA1LP34931 641 aa24.71■■□□□ 1.55
TSEN54-211ENST00000583818 PIK3C2GO75747 1445 aa24.69■■□□□ 1.54
TSEN54-211ENST00000583818 KDM2AQ9Y2K7 1162 aa24.67■■□□□ 1.54
TSEN54-211ENST00000583818 TMEM132EQ6IEE7 984 aa24.66■■□□□ 1.54
TSEN54-211ENST00000583818 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
TSEN54-211ENST00000583818 ASXL1Q8IXJ9 1541 aa24.66■■□□□ 1.54
TSEN54-211ENST00000583818 MYOM2P54296 1465 aa24.65■■□□□ 1.54
TSEN54-211ENST00000583818 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
TSEN54-211ENST00000583818 DCAF11Q8TEB1 546 aa24.64■■□□□ 1.54
TSEN54-211ENST00000583818 STK26Q9P289 416 aa24.64■■□□□ 1.54
TSEN54-211ENST00000583818 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
TSEN54-211ENST00000583818 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
TSEN54-211ENST00000583818 CFAP70Q5T0N1 1121 aa24.62■■□□□ 1.53
TSEN54-211ENST00000583818 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
TSEN54-211ENST00000583818 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
TSEN54-211ENST00000583818 ROBO1Q9Y6N7 1651 aa24.61■■□□□ 1.53
TSEN54-211ENST00000583818 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
TSEN54-211ENST00000583818 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
TSEN54-211ENST00000583818 PTCH1Q13635 1447 aa24.6■■□□□ 1.53
TSEN54-211ENST00000583818 ATF3P18847 181 aa24.59■■□□□ 1.53
TSEN54-211ENST00000583818 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.53
TSEN54-211ENST00000583818 C14orf93Q9H972 538 aaKnown RBP24.57■■□□□ 1.52
TSEN54-211ENST00000583818 FAM135BQ49AJ0 1406 aa24.57■■□□□ 1.52
TSEN54-211ENST00000583818 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
TSEN54-211ENST00000583818 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
TSEN54-211ENST00000583818 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
TSEN54-211ENST00000583818 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
TSEN54-211ENST00000583818 WAPLQ7Z5K2 1190 aa24.54■■□□□ 1.52
TSEN54-211ENST00000583818 LAMC1P11047 1609 aa24.53■■□□□ 1.52
TSEN54-211ENST00000583818 PRAG1Q86YV5 1406 aa24.53■■□□□ 1.52
TSEN54-211ENST00000583818 PLEKHH1Q9ULM0 1364 aa24.53■■□□□ 1.52
TSEN54-211ENST00000583818 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
TSEN54-211ENST00000583818 KNDC1Q76NI1 1749 aa24.51■■□□□ 1.51
TSEN54-211ENST00000583818 DCCP43146 1447 aa24.51■■□□□ 1.51
TSEN54-211ENST00000583818 TECPR2O15040 1411 aa24.5■■□□□ 1.51
TSEN54-211ENST00000583818 MST1RQ04912 1400 aa24.5■■□□□ 1.51
TSEN54-211ENST00000583818 ABCC11Q96J66 1382 aa24.49■■□□□ 1.51
TSEN54-211ENST00000583818 ADGRB1O14514 1584 aa24.48■■□□□ 1.51
TSEN54-211ENST00000583818 PHLPP1O60346 1717 aa24.45■■□□□ 1.5
TSEN54-211ENST00000583818 SAFB2Q14151 953 aaKnown RBP eCLIP24.45■■□□□ 1.5
TSEN54-211ENST00000583818 BRINP3Q76B58 766 aa24.45■■□□□ 1.5
TSEN54-211ENST00000583818 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
TSEN54-211ENST00000583818 PCGF6Q9BYE7 350 aa24.43■■□□□ 1.5
TSEN54-211ENST00000583818 TRAK1Q9UPV9 953 aa24.43■■□□□ 1.5
TSEN54-211ENST00000583818 DISP3Q9P2K9 1392 aa24.42■■□□□ 1.5
TSEN54-211ENST00000583818 PRAM1Q96QH2 718 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms