RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 CLTCL1P53675 1640 aa15.11■□□□□ 0.01
CACNB1-211ENST00000582877 CHGAP10645 457 aaKnown RBP15.09■□□□□ 0.01
CACNB1-211ENST00000582877 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
CACNB1-211ENST00000582877 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
CACNB1-211ENST00000582877 TRPM2O94759 1503 aa15.08■□□□□ 0.01
CACNB1-211ENST00000582877 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
CACNB1-211ENST00000582877 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
CACNB1-211ENST00000582877 PIP4K2BP78356 416 aa15.07■□□□□ 0
CACNB1-211ENST00000582877 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
CACNB1-211ENST00000582877 KIF1BO60333 1816 aa15.07■□□□□ 0
CACNB1-211ENST00000582877 PPP1R15AO75807 674 aaPredicted RBP15.06■□□□□ 0
CACNB1-211ENST00000582877 TOM1O60784 492 aa15.05■□□□□ -0
CACNB1-211ENST00000582877 BCANQ96GW7 911 aa15.05■□□□□ -0
CACNB1-211ENST00000582877 NKTRP30414 1462 aaKnown RBP15.05■□□□□ -0
CACNB1-211ENST00000582877 DIP2AQ14689 1571 aa15.05■□□□□ -0
CACNB1-211ENST00000582877 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
CACNB1-211ENST00000582877 NUTM2DQ5VT03 806 aaPredicted RBP15.04■□□□□ -0
CACNB1-211ENST00000582877 ADAMTS13Q76LX8 1427 aa15.02■□□□□ -0
CACNB1-211ENST00000582877 TRIM52Q96A61 297 aa15.02■□□□□ -0
CACNB1-211ENST00000582877 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
CACNB1-211ENST00000582877 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
CACNB1-211ENST00000582877 KCNA6P17658 529 aa15.01□□□□□ -0.01
CACNB1-211ENST00000582877 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
CACNB1-211ENST00000582877 HSPA1LP34931 641 aa15□□□□□ -0.01
CACNB1-211ENST00000582877 ABCF1Q8NE71 845 aaKnown RBP eCLIP15□□□□□ -0.01
CACNB1-211ENST00000582877 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
CACNB1-211ENST00000582877 HDGFP51858 240 aaKnown RBP14.99□□□□□ -0.01
CACNB1-211ENST00000582877 RBM33Q96EV2 1170 aaKnown RBP14.99□□□□□ -0.01
CACNB1-211ENST00000582877 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
CACNB1-211ENST00000582877 ROBO1Q9Y6N7 1651 aa14.97□□□□□ -0.01
CACNB1-211ENST00000582877 PROSER2Q86WR7 435 aaPredicted RBP14.97□□□□□ -0.01
CACNB1-211ENST00000582877 PPLO60437 1756 aa14.97□□□□□ -0.01
CACNB1-211ENST00000582877 MED1Q15648 1581 aaPredicted RBP14.96□□□□□ -0.01
CACNB1-211ENST00000582877 ZNF326Q5BKZ1 582 aaKnown RBP14.96□□□□□ -0.01
CACNB1-211ENST00000582877 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
CACNB1-211ENST00000582877 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
CACNB1-211ENST00000582877 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
CACNB1-211ENST00000582877 PTPRUQ92729 1446 aa14.94□□□□□ -0.02
CACNB1-211ENST00000582877 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
CACNB1-211ENST00000582877 FOXD1Q16676 465 aa14.93□□□□□ -0.02
CACNB1-211ENST00000582877 PIK3R4Q99570 1358 aa14.93□□□□□ -0.02
CACNB1-211ENST00000582877 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
CACNB1-211ENST00000582877 MSH6P52701 1360 aa14.92□□□□□ -0.02
CACNB1-211ENST00000582877 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
CACNB1-211ENST00000582877 METP08581 1390 aa14.89□□□□□ -0.03
CACNB1-211ENST00000582877 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
CACNB1-211ENST00000582877 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
CACNB1-211ENST00000582877 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
CACNB1-211ENST00000582877 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
CACNB1-211ENST00000582877 NCOA3Q9Y6Q9 1424 aa14.87□□□□□ -0.03
CACNB1-211ENST00000582877 ILDR2Q71H61 639 aa14.87□□□□□ -0.03
CACNB1-211ENST00000582877 MPHOSPH9Q99550 1183 aa14.87□□□□□ -0.03
CACNB1-211ENST00000582877 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
CACNB1-211ENST00000582877 RAB3GAP2Q9H2M9 1393 aa14.86□□□□□ -0.03
CACNB1-211ENST00000582877 C14orf37Q86TY3 774 aa14.86□□□□□ -0.03
CACNB1-211ENST00000582877 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
CACNB1-211ENST00000582877 COL16A1Q07092 1604 aaPredicted RBP14.83□□□□□ -0.04
CACNB1-211ENST00000582877 RPGRIP1LQ68CZ1 1315 aa14.83□□□□□ -0.04
CACNB1-211ENST00000582877 VGFO15240 615 aaPredicted RBP14.81□□□□□ -0.04
CACNB1-211ENST00000582877 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
CACNB1-211ENST00000582877 DCCP43146 1447 aa14.81□□□□□ -0.04
CACNB1-211ENST00000582877 PTCH1Q13635 1447 aa14.81□□□□□ -0.04
CACNB1-211ENST00000582877 ADGRL3Q9HAR2 1447 aa14.81□□□□□ -0.04
CACNB1-211ENST00000582877 AHDC1Q5TGY3 1603 aaPredicted RBP14.81□□□□□ -0.04
CACNB1-211ENST00000582877 ASXL1Q8IXJ9 1541 aa14.8□□□□□ -0.04
CACNB1-211ENST00000582877 C19orf44Q9H6X5 657 aa14.79□□□□□ -0.04
CACNB1-211ENST00000582877 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 NHSL1Q5SYE7 1610 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 MST1RQ04912 1400 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 ADGRF5Q8IZF2 1346 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
CACNB1-211ENST00000582877 ATF3P18847 181 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
CACNB1-211ENST00000582877 ROBO2Q9HCK4 1378 aa14.77□□□□□ -0.04
CACNB1-211ENST00000582877 PIK3C2GO75747 1445 aa14.76□□□□□ -0.05
CACNB1-211ENST00000582877 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
CACNB1-211ENST00000582877 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
CACNB1-211ENST00000582877 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
CACNB1-211ENST00000582877 LAMC1P11047 1609 aa14.76□□□□□ -0.05
CACNB1-211ENST00000582877 MYOM2P54296 1465 aa14.75□□□□□ -0.05
CACNB1-211ENST00000582877 NRXN1Q9ULB1 1477 aa14.73□□□□□ -0.05
CACNB1-211ENST00000582877 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
CACNB1-211ENST00000582877 BRINP3Q76B58 766 aa14.72□□□□□ -0.05
CACNB1-211ENST00000582877 JCADQ9P266 1359 aa14.72□□□□□ -0.05
CACNB1-211ENST00000582877 TECPR2O15040 1411 aa14.71□□□□□ -0.05
CACNB1-211ENST00000582877 LRP6O75581 1613 aa14.7□□□□□ -0.06
CACNB1-211ENST00000582877 C1orf167Q5SNV9 1468 aa14.7□□□□□ -0.06
CACNB1-211ENST00000582877 SOCS7O14512 581 aa14.7□□□□□ -0.06
CACNB1-211ENST00000582877 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
CACNB1-211ENST00000582877 FMN2Q9NZ56 1722 aa14.68□□□□□ -0.06
CACNB1-211ENST00000582877 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
CACNB1-211ENST00000582877 TMEM132EQ6IEE7 984 aa14.67□□□□□ -0.06
CACNB1-211ENST00000582877 STK26Q9P289 416 aa14.67□□□□□ -0.06
CACNB1-211ENST00000582877 PLEKHH1Q9ULM0 1364 aa14.67□□□□□ -0.06
CACNB1-211ENST00000582877 DDX17Q92841 729 aaKnown RBP14.66□□□□□ -0.06
CACNB1-211ENST00000582877 RGS17Q9UGC6 210 aaPredicted RBP14.66□□□□□ -0.06
CACNB1-211ENST00000582877 HRCP23327 699 aa14.65□□□□□ -0.06
CACNB1-211ENST00000582877 ADGRB1O14514 1584 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms