RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 LRRC7Q96NW7 1537 aa28.14■■■□□ 2.1
LIMS2-218ENST00000582671 SLC26A8Q96RN1 970 aa28.13■■■□□ 2.09
LIMS2-218ENST00000582671 KIF1BO60333 1816 aa28.13■■■□□ 2.09
LIMS2-218ENST00000582671 UBAP1LF5GYI3 381 aa28.11■■■□□ 2.09
LIMS2-218ENST00000582671 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
LIMS2-218ENST00000582671 PLEKHG1Q9ULL1 1385 aa28.1■■■□□ 2.09
LIMS2-218ENST00000582671 NUTM2DQ5VT03 806 aaPredicted RBP28.09■■■□□ 2.09
LIMS2-218ENST00000582671 SLC4A1APQ9BWU0 796 aaKnown RBP28.09■■■□□ 2.09
LIMS2-218ENST00000582671 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
LIMS2-218ENST00000582671 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
LIMS2-218ENST00000582671 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
LIMS2-218ENST00000582671 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
LIMS2-218ENST00000582671 BCANQ96GW7 911 aa28.06■■■□□ 2.08
LIMS2-218ENST00000582671 NWD1Q149M9 1564 aa28.04■■■□□ 2.08
LIMS2-218ENST00000582671 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.04■■■□□ 2.08
LIMS2-218ENST00000582671 SETD5Q9C0A6 1442 aa28.02■■■□□ 2.08
LIMS2-218ENST00000582671 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
LIMS2-218ENST00000582671 KCNA6P17658 529 aa28.01■■■□□ 2.07
LIMS2-218ENST00000582671 FOXD1Q16676 465 aa28.01■■■□□ 2.07
LIMS2-218ENST00000582671 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
LIMS2-218ENST00000582671 NEXMIFQ5QGS0 1516 aa28■■■□□ 2.07
LIMS2-218ENST00000582671 MPHOSPH9Q99550 1183 aa27.98■■■□□ 2.07
LIMS2-218ENST00000582671 TOM1O60784 492 aa27.97■■■□□ 2.07
LIMS2-218ENST00000582671 ZNF326Q5BKZ1 582 aaKnown RBP27.97■■■□□ 2.07
LIMS2-218ENST00000582671 TBX22Q9Y458 520 aa27.97■■■□□ 2.07
LIMS2-218ENST00000582671 DIP2AQ14689 1571 aa27.97■■■□□ 2.07
LIMS2-218ENST00000582671 RAB3GAP2Q9H2M9 1393 aa27.95■■■□□ 2.06
LIMS2-218ENST00000582671 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
LIMS2-218ENST00000582671 NKTRP30414 1462 aaKnown RBP27.94■■■□□ 2.06
LIMS2-218ENST00000582671 SETBP1Q9Y6X0 1596 aa27.93■■■□□ 2.06
LIMS2-218ENST00000582671 PPLO60437 1756 aa27.92■■■□□ 2.06
LIMS2-218ENST00000582671 TMEM94Q12767 1356 aa27.92■■■□□ 2.06
LIMS2-218ENST00000582671 RBM33Q96EV2 1170 aaKnown RBP27.92■■■□□ 2.06
LIMS2-218ENST00000582671 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
LIMS2-218ENST00000582671 PROSER2Q86WR7 435 aaPredicted RBP27.9■■■□□ 2.06
LIMS2-218ENST00000582671 ACIN1Q9UKV3 1341 aaKnown RBP27.86■■■□□ 2.05
LIMS2-218ENST00000582671 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
LIMS2-218ENST00000582671 PTPRUQ92729 1446 aa27.85■■■□□ 2.05
LIMS2-218ENST00000582671 CCDC144AA2RUR9 1427 aa27.84■■■□□ 2.05
LIMS2-218ENST00000582671 SETD1AO15047 1707 aaKnown RBP27.84■■■□□ 2.05
LIMS2-218ENST00000582671 IFT172Q9UG01 1749 aa27.84■■■□□ 2.05
LIMS2-218ENST00000582671 XRN1Q8IZH2 1706 aaKnown RBP27.83■■■□□ 2.05
LIMS2-218ENST00000582671 HSPA1LP34931 641 aa27.81■■■□□ 2.04
LIMS2-218ENST00000582671 SPATA31E1Q6ZUB1 1445 aa27.8■■■□□ 2.04
LIMS2-218ENST00000582671 METP08581 1390 aa27.79■■■□□ 2.04
LIMS2-218ENST00000582671 RPGRIP1LQ68CZ1 1315 aa27.79■■■□□ 2.04
LIMS2-218ENST00000582671 AMOTL2Q9Y2J4 779 aa27.78■■■□□ 2.04
LIMS2-218ENST00000582671 VGFO15240 615 aaPredicted RBP27.75■■■□□ 2.03
LIMS2-218ENST00000582671 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.75■■■□□ 2.03
LIMS2-218ENST00000582671 MSH6P52701 1360 aa27.74■■■□□ 2.03
LIMS2-218ENST00000582671 RGL3Q3MIN7 710 aa27.73■■■□□ 2.03
LIMS2-218ENST00000582671 ROBO1Q9Y6N7 1651 aa27.72■■■□□ 2.03
LIMS2-218ENST00000582671 HRCP23327 699 aa27.72■■■□□ 2.03
LIMS2-218ENST00000582671 NCOA3Q9Y6Q9 1424 aa27.72■■■□□ 2.03
LIMS2-218ENST00000582671 FAM135BQ49AJ0 1406 aa27.68■■■□□ 2.02
LIMS2-218ENST00000582671 ADGRF5Q8IZF2 1346 aa27.67■■■□□ 2.02
LIMS2-218ENST00000582671 ANKRD30BQ9BXX2 1392 aa27.65■■■□□ 2.02
LIMS2-218ENST00000582671 C14orf37Q86TY3 774 aa27.65■■■□□ 2.02
LIMS2-218ENST00000582671 NALCNQ8IZF0 1738 aa27.64■■■□□ 2.01
LIMS2-218ENST00000582671 SLAIN2Q9P270 581 aa27.63■■■□□ 2.01
LIMS2-218ENST00000582671 C19orf44Q9H6X5 657 aa27.62■■■□□ 2.01
LIMS2-218ENST00000582671 DISP3Q9P2K9 1392 aa27.61■■■□□ 2.01
LIMS2-218ENST00000582671 PIK3C2GO75747 1445 aa27.58■■■□□ 2
LIMS2-218ENST00000582671 ASXL1Q8IXJ9 1541 aa27.57■■■□□ 2
LIMS2-218ENST00000582671 MED1Q15648 1581 aaPredicted RBP27.57■■■□□ 2
LIMS2-218ENST00000582671 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
LIMS2-218ENST00000582671 PRAG1Q86YV5 1406 aa27.57■■■□□ 2
LIMS2-218ENST00000582671 PHLPP1O60346 1717 aa27.56■■■□□ 2
LIMS2-218ENST00000582671 CADPS2Q86UW7 1296 aa27.56■■■□□ 2
LIMS2-218ENST00000582671 PTCH1Q13635 1447 aa27.56■■■□□ 2
LIMS2-218ENST00000582671 ATF3P18847 181 aa27.55■■■□□ 2
LIMS2-218ENST00000582671 MYOM2P54296 1465 aa27.55■■■□□ 2
LIMS2-218ENST00000582671 NRXN1Q9ULB1 1477 aa27.55■■■□□ 2
LIMS2-218ENST00000582671 DCCP43146 1447 aa27.54■■■□□ 2
LIMS2-218ENST00000582671 ADGRL3Q9HAR2 1447 aa27.54■■■□□ 2
LIMS2-218ENST00000582671 KNDC1Q76NI1 1749 aa27.53■■■□□ 2
LIMS2-218ENST00000582671 LAMC1P11047 1609 aa27.5■■□□□ 1.99
LIMS2-218ENST00000582671 MST1RQ04912 1400 aa27.5■■□□□ 1.99
LIMS2-218ENST00000582671 TMEM132EQ6IEE7 984 aa27.49■■□□□ 1.99
LIMS2-218ENST00000582671 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
LIMS2-218ENST00000582671 C14orf93Q9H972 538 aaKnown RBP27.46■■□□□ 1.99
LIMS2-218ENST00000582671 TECPR2O15040 1411 aa27.46■■□□□ 1.99
LIMS2-218ENST00000582671 LRPPRCP42704 1394 aaKnown RBP27.46■■□□□ 1.99
LIMS2-218ENST00000582671 AHDC1Q5TGY3 1603 aaPredicted RBP27.45■■□□□ 1.99
LIMS2-218ENST00000582671 STK26Q9P289 416 aa27.45■■□□□ 1.98
LIMS2-218ENST00000582671 CFAP70Q5T0N1 1121 aa27.44■■□□□ 1.98
LIMS2-218ENST00000582671 ILDR2Q71H61 639 aa27.43■■□□□ 1.98
LIMS2-218ENST00000582671 BRINP3Q76B58 766 aa27.43■■□□□ 1.98
LIMS2-218ENST00000582671 YTHDC2Q9H6S0 1430 aaKnown RBP27.42■■□□□ 1.98
LIMS2-218ENST00000582671 NHSL1Q5SYE7 1610 aa27.42■■□□□ 1.98
LIMS2-218ENST00000582671 ABCC11Q96J66 1382 aa27.42■■□□□ 1.98
LIMS2-218ENST00000582671 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
LIMS2-218ENST00000582671 WAPLQ7Z5K2 1190 aa27.4■■□□□ 1.98
LIMS2-218ENST00000582671 DCAF11Q8TEB1 546 aa27.4■■□□□ 1.98
LIMS2-218ENST00000582671 KDM2AQ9Y2K7 1162 aa27.39■■□□□ 1.98
LIMS2-218ENST00000582671 PLEKHH1Q9ULM0 1364 aa27.38■■□□□ 1.97
LIMS2-218ENST00000582671 CDC42BPGQ6DT37 1551 aa27.37■■□□□ 1.97
LIMS2-218ENST00000582671 C1orf167Q5SNV9 1468 aa27.37■■□□□ 1.97
LIMS2-218ENST00000582671 ADGRB1O14514 1584 aa27.36■■□□□ 1.97
LIMS2-218ENST00000582671 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms