RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
PPP4R1-220ENST00000581835 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
PPP4R1-220ENST00000581835 KIF1BO60333 1816 aa15.33■□□□□ 0.05
PPP4R1-220ENST00000581835 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
PPP4R1-220ENST00000581835 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.33■□□□□ 0.04
PPP4R1-220ENST00000581835 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.04
PPP4R1-220ENST00000581835 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
PPP4R1-220ENST00000581835 NUTM2DQ5VT03 806 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-220ENST00000581835 BCANQ96GW7 911 aa15.31■□□□□ 0.04
PPP4R1-220ENST00000581835 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
PPP4R1-220ENST00000581835 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-220ENST00000581835 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
PPP4R1-220ENST00000581835 FOXD1Q16676 465 aa15.3■□□□□ 0.04
PPP4R1-220ENST00000581835 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
PPP4R1-220ENST00000581835 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
PPP4R1-220ENST00000581835 UBAP1LF5GYI3 381 aa15.29■□□□□ 0.04
PPP4R1-220ENST00000581835 ZNF326Q5BKZ1 582 aaKnown RBP15.29■□□□□ 0.04
PPP4R1-220ENST00000581835 KCNA6P17658 529 aa15.28■□□□□ 0.04
PPP4R1-220ENST00000581835 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
PPP4R1-220ENST00000581835 XIRP1Q702N8 1843 aaKnown RBP15.28■□□□□ 0.04
PPP4R1-220ENST00000581835 TBX22Q9Y458 520 aa15.27■□□□□ 0.04
PPP4R1-220ENST00000581835 ADAMTS13Q76LX8 1427 aa15.26■□□□□ 0.03
PPP4R1-220ENST00000581835 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
PPP4R1-220ENST00000581835 TOM1O60784 492 aa15.25■□□□□ 0.03
PPP4R1-220ENST00000581835 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
PPP4R1-220ENST00000581835 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
PPP4R1-220ENST00000581835 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
PPP4R1-220ENST00000581835 ALKQ9UM73 1620 aa15.23■□□□□ 0.03
PPP4R1-220ENST00000581835 SETBP1Q9Y6X0 1596 aa15.23■□□□□ 0.03
PPP4R1-220ENST00000581835 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-220ENST00000581835 HRCP23327 699 aa15.22■□□□□ 0.03
PPP4R1-220ENST00000581835 CCDC144AA2RUR9 1427 aa15.22■□□□□ 0.03
PPP4R1-220ENST00000581835 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
PPP4R1-220ENST00000581835 TMEM94Q12767 1356 aa15.21■□□□□ 0.02
PPP4R1-220ENST00000581835 PIK3R4Q99570 1358 aa15.21■□□□□ 0.02
PPP4R1-220ENST00000581835 PPLO60437 1756 aa15.21■□□□□ 0.02
PPP4R1-220ENST00000581835 RPGRIP1LQ68CZ1 1315 aa15.2■□□□□ 0.02
PPP4R1-220ENST00000581835 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
PPP4R1-220ENST00000581835 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
PPP4R1-220ENST00000581835 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-220ENST00000581835 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-220ENST00000581835 SPATA31E1Q6ZUB1 1445 aa15.17■□□□□ 0.02
PPP4R1-220ENST00000581835 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
PPP4R1-220ENST00000581835 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
PPP4R1-220ENST00000581835 METP08581 1390 aa15.16■□□□□ 0.02
PPP4R1-220ENST00000581835 RGL3Q3MIN7 710 aa15.16■□□□□ 0.02
PPP4R1-220ENST00000581835 SETD1AO15047 1707 aaKnown RBP15.14■□□□□ 0.01
PPP4R1-220ENST00000581835 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
PPP4R1-220ENST00000581835 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
PPP4R1-220ENST00000581835 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
PPP4R1-220ENST00000581835 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
PPP4R1-220ENST00000581835 MSH6P52701 1360 aa15.12■□□□□ 0.01
PPP4R1-220ENST00000581835 HSPA1LP34931 641 aa15.12■□□□□ 0.01
PPP4R1-220ENST00000581835 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
PPP4R1-220ENST00000581835 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
PPP4R1-220ENST00000581835 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
PPP4R1-220ENST00000581835 C14orf37Q86TY3 774 aa15.08■□□□□ 0
PPP4R1-220ENST00000581835 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
PPP4R1-220ENST00000581835 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
PPP4R1-220ENST00000581835 SLAIN2Q9P270 581 aa15.06■□□□□ 0
PPP4R1-220ENST00000581835 PIK3C2GO75747 1445 aa15.06■□□□□ 0
PPP4R1-220ENST00000581835 MYOM2P54296 1465 aa15.04■□□□□ -0
PPP4R1-220ENST00000581835 PTCH1Q13635 1447 aa15.04■□□□□ -0
PPP4R1-220ENST00000581835 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
PPP4R1-220ENST00000581835 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
PPP4R1-220ENST00000581835 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
PPP4R1-220ENST00000581835 ATF3P18847 181 aa15.03■□□□□ -0
PPP4R1-220ENST00000581835 DCCP43146 1447 aa15.02■□□□□ -0
PPP4R1-220ENST00000581835 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
PPP4R1-220ENST00000581835 NALCNQ8IZF0 1738 aa15.02□□□□□ -0.01
PPP4R1-220ENST00000581835 ASXL1Q8IXJ9 1541 aa15.02□□□□□ -0.01
PPP4R1-220ENST00000581835 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
PPP4R1-220ENST00000581835 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
PPP4R1-220ENST00000581835 C14orf93Q9H972 538 aaKnown RBP15.01□□□□□ -0.01
PPP4R1-220ENST00000581835 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
PPP4R1-220ENST00000581835 DCAF11Q8TEB1 546 aa14.99□□□□□ -0.01
PPP4R1-220ENST00000581835 TECPR2O15040 1411 aa14.99□□□□□ -0.01
PPP4R1-220ENST00000581835 LAMC1P11047 1609 aa14.99□□□□□ -0.01
PPP4R1-220ENST00000581835 LRPPRCP42704 1394 aaKnown RBP14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 DISP3Q9P2K9 1392 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 KNDC1Q76NI1 1749 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 STK26Q9P289 416 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
PPP4R1-220ENST00000581835 MST1RQ04912 1400 aa14.97□□□□□ -0.01
PPP4R1-220ENST00000581835 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
PPP4R1-220ENST00000581835 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
PPP4R1-220ENST00000581835 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
PPP4R1-220ENST00000581835 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
PPP4R1-220ENST00000581835 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
PPP4R1-220ENST00000581835 AHDC1Q5TGY3 1603 aaPredicted RBP14.93□□□□□ -0.02
PPP4R1-220ENST00000581835 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
PPP4R1-220ENST00000581835 PLEKHH1Q9ULM0 1364 aa14.93□□□□□ -0.02
PPP4R1-220ENST00000581835 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
PPP4R1-220ENST00000581835 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
PPP4R1-220ENST00000581835 ADGRB1O14514 1584 aa14.92□□□□□ -0.02
PPP4R1-220ENST00000581835 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms