RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 FOXD1Q16676 465 aa22.63■■□□□ 1.21
ATPAF2-211ENST00000581698 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
ATPAF2-211ENST00000581698 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
ATPAF2-211ENST00000581698 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
ATPAF2-211ENST00000581698 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
ATPAF2-211ENST00000581698 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
ATPAF2-211ENST00000581698 PLEKHG1Q9ULL1 1385 aa22.61■■□□□ 1.21
ATPAF2-211ENST00000581698 NWD1Q149M9 1564 aa22.6■■□□□ 1.21
ATPAF2-211ENST00000581698 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
ATPAF2-211ENST00000581698 EID1Q9Y6B2 187 aa22.59■■□□□ 1.21
ATPAF2-211ENST00000581698 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
ATPAF2-211ENST00000581698 KIF1BO60333 1816 aa22.57■■□□□ 1.2
ATPAF2-211ENST00000581698 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
ATPAF2-211ENST00000581698 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
ATPAF2-211ENST00000581698 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
ATPAF2-211ENST00000581698 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
ATPAF2-211ENST00000581698 CHD2O14647 1828 aaKnown RBP22.54■■□□□ 1.2
ATPAF2-211ENST00000581698 SETBP1Q9Y6X0 1596 aa22.53■■□□□ 1.2
ATPAF2-211ENST00000581698 SPATA31E1Q6ZUB1 1445 aa22.51■■□□□ 1.19
ATPAF2-211ENST00000581698 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
ATPAF2-211ENST00000581698 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
ATPAF2-211ENST00000581698 PPLO60437 1756 aa22.5■■□□□ 1.19
ATPAF2-211ENST00000581698 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
ATPAF2-211ENST00000581698 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
ATPAF2-211ENST00000581698 XRN1Q8IZH2 1706 aaKnown RBP22.46■■□□□ 1.19
ATPAF2-211ENST00000581698 KCNA6P17658 529 aa22.46■■□□□ 1.19
ATPAF2-211ENST00000581698 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.46■■□□□ 1.19
ATPAF2-211ENST00000581698 NKTRP30414 1462 aaKnown RBP22.46■■□□□ 1.19
ATPAF2-211ENST00000581698 TBX22Q9Y458 520 aa22.44■■□□□ 1.18
ATPAF2-211ENST00000581698 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
ATPAF2-211ENST00000581698 CCDC144AA2RUR9 1427 aa22.42■■□□□ 1.18
ATPAF2-211ENST00000581698 TMEM94Q12767 1356 aa22.42■■□□□ 1.18
ATPAF2-211ENST00000581698 RBM33Q96EV2 1170 aaKnown RBP22.42■■□□□ 1.18
ATPAF2-211ENST00000581698 METP08581 1390 aa22.41■■□□□ 1.18
ATPAF2-211ENST00000581698 UBAP1LF5GYI3 381 aa22.41■■□□□ 1.18
ATPAF2-211ENST00000581698 HRCP23327 699 aa22.41■■□□□ 1.18
ATPAF2-211ENST00000581698 ANKRD30BQ9BXX2 1392 aa22.4■■□□□ 1.18
ATPAF2-211ENST00000581698 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
ATPAF2-211ENST00000581698 PIK3R4Q99570 1358 aa22.38■■□□□ 1.17
ATPAF2-211ENST00000581698 HDGFP51858 240 aaKnown RBP22.37■■□□□ 1.17
ATPAF2-211ENST00000581698 ASXL1Q8IXJ9 1541 aa22.36■■□□□ 1.17
ATPAF2-211ENST00000581698 BCANQ96GW7 911 aa22.35■■□□□ 1.17
ATPAF2-211ENST00000581698 ADGRF5Q8IZF2 1346 aa22.34■■□□□ 1.17
ATPAF2-211ENST00000581698 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
ATPAF2-211ENST00000581698 RPGRIP1LQ68CZ1 1315 aa22.32■■□□□ 1.16
ATPAF2-211ENST00000581698 NRXN1Q9ULB1 1477 aa22.32■■□□□ 1.16
ATPAF2-211ENST00000581698 PROSER2Q86WR7 435 aaPredicted RBP22.31■■□□□ 1.16
ATPAF2-211ENST00000581698 PIK3C2GO75747 1445 aa22.3■■□□□ 1.16
ATPAF2-211ENST00000581698 PRAG1Q86YV5 1406 aa22.3■■□□□ 1.16
ATPAF2-211ENST00000581698 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
ATPAF2-211ENST00000581698 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
ATPAF2-211ENST00000581698 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
ATPAF2-211ENST00000581698 PIP4K2BP78356 416 aa22.28■■□□□ 1.16
ATPAF2-211ENST00000581698 TOM1O60784 492 aa22.27■■□□□ 1.16
ATPAF2-211ENST00000581698 MYOM2P54296 1465 aa22.27■■□□□ 1.16
ATPAF2-211ENST00000581698 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
ATPAF2-211ENST00000581698 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
ATPAF2-211ENST00000581698 NCOA3Q9Y6Q9 1424 aa22.25■■□□□ 1.15
ATPAF2-211ENST00000581698 HSPA1LP34931 641 aa22.25■■□□□ 1.15
ATPAF2-211ENST00000581698 DHX57Q6P158 1386 aaKnown RBP22.24■■□□□ 1.15
ATPAF2-211ENST00000581698 ROBO2Q9HCK4 1378 aa22.24■■□□□ 1.15
ATPAF2-211ENST00000581698 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
ATPAF2-211ENST00000581698 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
ATPAF2-211ENST00000581698 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.14
ATPAF2-211ENST00000581698 KNDC1Q76NI1 1749 aa22.19■■□□□ 1.14
ATPAF2-211ENST00000581698 MSH6P52701 1360 aa22.18■■□□□ 1.14
ATPAF2-211ENST00000581698 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
ATPAF2-211ENST00000581698 TECPR2O15040 1411 aa22.17■■□□□ 1.14
ATPAF2-211ENST00000581698 ADGRL3Q9HAR2 1447 aa22.17■■□□□ 1.14
ATPAF2-211ENST00000581698 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
ATPAF2-211ENST00000581698 DCCP43146 1447 aa22.14■■□□□ 1.14
ATPAF2-211ENST00000581698 LAMC1P11047 1609 aa22.14■■□□□ 1.14
ATPAF2-211ENST00000581698 MST1RQ04912 1400 aa22.14■■□□□ 1.13
ATPAF2-211ENST00000581698 LRPPRCP42704 1394 aaKnown RBP22.12■■□□□ 1.13
ATPAF2-211ENST00000581698 TMEM132EQ6IEE7 984 aa22.12■■□□□ 1.13
ATPAF2-211ENST00000581698 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
ATPAF2-211ENST00000581698 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
ATPAF2-211ENST00000581698 PLEKHH1Q9ULM0 1364 aa22.12■■□□□ 1.13
ATPAF2-211ENST00000581698 CFAP70Q5T0N1 1121 aa22.11■■□□□ 1.13
ATPAF2-211ENST00000581698 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
ATPAF2-211ENST00000581698 COL16A1Q07092 1604 aaPredicted RBP22.1■■□□□ 1.13
ATPAF2-211ENST00000581698 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
ATPAF2-211ENST00000581698 ABCC11Q96J66 1382 aa22.09■■□□□ 1.13
ATPAF2-211ENST00000581698 AHDC1Q5TGY3 1603 aaPredicted RBP22.07■■□□□ 1.12
ATPAF2-211ENST00000581698 TRIM26Q12899 539 aaPredicted RBP22.07■■□□□ 1.12
ATPAF2-211ENST00000581698 MED1Q15648 1581 aaPredicted RBP22.07■■□□□ 1.12
ATPAF2-211ENST00000581698 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
ATPAF2-211ENST00000581698 CDC42BPGQ6DT37 1551 aa22.05■■□□□ 1.12
ATPAF2-211ENST00000581698 NHSL1Q5SYE7 1610 aa22.05■■□□□ 1.12
ATPAF2-211ENST00000581698 WAPLQ7Z5K2 1190 aa22.04■■□□□ 1.12
ATPAF2-211ENST00000581698 DCAF11Q8TEB1 546 aa22.04■■□□□ 1.12
ATPAF2-211ENST00000581698 BRINP3Q76B58 766 aa22.03■■□□□ 1.12
ATPAF2-211ENST00000581698 C14orf37Q86TY3 774 aa22.03■■□□□ 1.12
ATPAF2-211ENST00000581698 CADPS2Q86UW7 1296 aa22.03■■□□□ 1.12
ATPAF2-211ENST00000581698 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
ATPAF2-211ENST00000581698 STK26Q9P289 416 aa22.03■■□□□ 1.12
ATPAF2-211ENST00000581698 DLC1Q96QB1 1528 aa22.02■■□□□ 1.12
ATPAF2-211ENST00000581698 C1orf167Q5SNV9 1468 aa22.02■■□□□ 1.12
ATPAF2-211ENST00000581698 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
ATPAF2-211ENST00000581698 ATF3P18847 181 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms