RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 RIMS2Q9UQ26 1411 aa19.19■□□□□ 0.66
CDC42EP4-207ENST00000581045 NUTM2DQ5VT03 806 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP4-207ENST00000581045 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP4-207ENST00000581045 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP4-207ENST00000581045 ZFYVE9O95405 1425 aa19.16■□□□□ 0.66
CDC42EP4-207ENST00000581045 BCANQ96GW7 911 aa19.15■□□□□ 0.66
CDC42EP4-207ENST00000581045 MED14O60244 1454 aa19.15■□□□□ 0.66
CDC42EP4-207ENST00000581045 ANKRD30BQ9BXX2 1392 aa19.13■□□□□ 0.65
CDC42EP4-207ENST00000581045 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
CDC42EP4-207ENST00000581045 PPLO60437 1756 aa19.12■□□□□ 0.65
CDC42EP4-207ENST00000581045 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
CDC42EP4-207ENST00000581045 HDGFP51858 240 aaKnown RBP19.11■□□□□ 0.65
CDC42EP4-207ENST00000581045 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDC42EP4-207ENST00000581045 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
CDC42EP4-207ENST00000581045 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
CDC42EP4-207ENST00000581045 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP4-207ENST00000581045 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
CDC42EP4-207ENST00000581045 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.64
CDC42EP4-207ENST00000581045 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
CDC42EP4-207ENST00000581045 STRCP1A6NGW2 1772 aa19.05■□□□□ 0.64
CDC42EP4-207ENST00000581045 NRXN3Q9Y4C0 1643 aa19.04■□□□□ 0.64
CDC42EP4-207ENST00000581045 LTBP4Q8N2S1 1624 aa19.02■□□□□ 0.64
CDC42EP4-207ENST00000581045 RPGRIP1LQ68CZ1 1315 aa19.01■□□□□ 0.63
CDC42EP4-207ENST00000581045 SETBP1Q9Y6X0 1596 aa19.01■□□□□ 0.63
CDC42EP4-207ENST00000581045 VGFO15240 615 aaPredicted RBP19■□□□□ 0.63
CDC42EP4-207ENST00000581045 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
CDC42EP4-207ENST00000581045 DIP2AQ14689 1571 aa19■□□□□ 0.63
CDC42EP4-207ENST00000581045 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
CDC42EP4-207ENST00000581045 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
CDC42EP4-207ENST00000581045 CHD2O14647 1828 aaKnown RBP18.98■□□□□ 0.63
CDC42EP4-207ENST00000581045 ADGRF5Q8IZF2 1346 aa18.98■□□□□ 0.63
CDC42EP4-207ENST00000581045 KDM2AQ9Y2K7 1162 aa18.96■□□□□ 0.63
CDC42EP4-207ENST00000581045 SETD1AO15047 1707 aaKnown RBP18.96■□□□□ 0.63
CDC42EP4-207ENST00000581045 CPS1P31327 1500 aa18.95■□□□□ 0.62
CDC42EP4-207ENST00000581045 CERKQ8TCT0 537 aa18.95■□□□□ 0.62
CDC42EP4-207ENST00000581045 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
CDC42EP4-207ENST00000581045 ALKQ9UM73 1620 aa18.95■□□□□ 0.62
CDC42EP4-207ENST00000581045 TBX22Q9Y458 520 aa18.94■□□□□ 0.62
CDC42EP4-207ENST00000581045 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
CDC42EP4-207ENST00000581045 MYOM2P54296 1465 aa18.93■□□□□ 0.62
CDC42EP4-207ENST00000581045 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
CDC42EP4-207ENST00000581045 METP08581 1390 aa18.91■□□□□ 0.62
CDC42EP4-207ENST00000581045 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
CDC42EP4-207ENST00000581045 KCNA6P17658 529 aa18.9■□□□□ 0.62
CDC42EP4-207ENST00000581045 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
CDC42EP4-207ENST00000581045 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
CDC42EP4-207ENST00000581045 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-207ENST00000581045 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
CDC42EP4-207ENST00000581045 NRXN1Q9ULB1 1477 aa18.88■□□□□ 0.61
CDC42EP4-207ENST00000581045 LAMC1P11047 1609 aa18.88■□□□□ 0.61
CDC42EP4-207ENST00000581045 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
CDC42EP4-207ENST00000581045 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CDC42EP4-207ENST00000581045 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
CDC42EP4-207ENST00000581045 AMOTL2Q9Y2J4 779 aa18.87■□□□□ 0.61
CDC42EP4-207ENST00000581045 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
CDC42EP4-207ENST00000581045 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
CDC42EP4-207ENST00000581045 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
CDC42EP4-207ENST00000581045 CFAP70Q5T0N1 1121 aa18.84■□□□□ 0.61
CDC42EP4-207ENST00000581045 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
CDC42EP4-207ENST00000581045 TMEM94Q12767 1356 aa18.83■□□□□ 0.61
CDC42EP4-207ENST00000581045 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
CDC42EP4-207ENST00000581045 STK26Q9P289 416 aa18.83■□□□□ 0.6
CDC42EP4-207ENST00000581045 IQSEC2Q5JU85 1478 aa18.83■□□□□ 0.6
CDC42EP4-207ENST00000581045 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
CDC42EP4-207ENST00000581045 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
CDC42EP4-207ENST00000581045 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
CDC42EP4-207ENST00000581045 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
CDC42EP4-207ENST00000581045 KNDC1Q76NI1 1749 aa18.79■□□□□ 0.6
CDC42EP4-207ENST00000581045 UBAP1LF5GYI3 381 aa18.78■□□□□ 0.6
CDC42EP4-207ENST00000581045 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.6
CDC42EP4-207ENST00000581045 YTHDC2Q9H6S0 1430 aaKnown RBP18.77■□□□□ 0.6
CDC42EP4-207ENST00000581045 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.59
CDC42EP4-207ENST00000581045 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
CDC42EP4-207ENST00000581045 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
CDC42EP4-207ENST00000581045 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
CDC42EP4-207ENST00000581045 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.75■□□□□ 0.59
CDC42EP4-207ENST00000581045 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
CDC42EP4-207ENST00000581045 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
CDC42EP4-207ENST00000581045 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
CDC42EP4-207ENST00000581045 MSH6P52701 1360 aa18.74■□□□□ 0.59
CDC42EP4-207ENST00000581045 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
CDC42EP4-207ENST00000581045 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
CDC42EP4-207ENST00000581045 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
CDC42EP4-207ENST00000581045 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
CDC42EP4-207ENST00000581045 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
CDC42EP4-207ENST00000581045 TOM1O60784 492 aa18.71■□□□□ 0.59
CDC42EP4-207ENST00000581045 NBPF1Q3BBV0 1214 aa18.71■□□□□ 0.59
CDC42EP4-207ENST00000581045 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
CDC42EP4-207ENST00000581045 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
CDC42EP4-207ENST00000581045 PLEKHH1Q9ULM0 1364 aa18.7■□□□□ 0.58
CDC42EP4-207ENST00000581045 TECPR2O15040 1411 aa18.7■□□□□ 0.58
CDC42EP4-207ENST00000581045 SAFB2Q14151 953 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDC42EP4-207ENST00000581045 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
CDC42EP4-207ENST00000581045 NBPF8Q3BBV2 869 aa18.69■□□□□ 0.58
CDC42EP4-207ENST00000581045 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
CDC42EP4-207ENST00000581045 NCOA3Q9Y6Q9 1424 aa18.68■□□□□ 0.58
CDC42EP4-207ENST00000581045 ATF3P18847 181 aa18.67■□□□□ 0.58
CDC42EP4-207ENST00000581045 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
CDC42EP4-207ENST00000581045 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
CDC42EP4-207ENST00000581045 C19orf44Q9H6X5 657 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms