RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 PPP1R15AO75807 674 aaPredicted RBP40.23■■■■■ 4.03
LINC00271-207ENST00000580741 BCANQ96GW7 911 aa40.23■■■■■ 4.03
LINC00271-207ENST00000580741 NUTM2DQ5VT03 806 aaPredicted RBP40.21■■■■■ 4.03
LINC00271-207ENST00000580741 SLC4A1APQ9BWU0 796 aaKnown RBP40.21■■■■■ 4.03
LINC00271-207ENST00000580741 LRRC7Q96NW7 1537 aa40.18■■■■■ 4.02
LINC00271-207ENST00000580741 HDGFP51858 240 aaKnown RBP40.17■■■■■ 4.02
LINC00271-207ENST00000580741 PLEKHG1Q9ULL1 1385 aa40.16■■■■■ 4.02
LINC00271-207ENST00000580741 TRPM2O94759 1503 aa40.16■■■■■ 4.02
LINC00271-207ENST00000580741 CLTCL1P53675 1640 aa40.15■■■■■ 4.02
LINC00271-207ENST00000580741 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.14■■■■■ 4.02
LINC00271-207ENST00000580741 FOXD1Q16676 465 aa40.08■■■■■ 4.01
LINC00271-207ENST00000580741 ZNF326Q5BKZ1 582 aaKnown RBP40.07■■■■■ 4.01
LINC00271-207ENST00000580741 KCNA6P17658 529 aa40.06■■■■■ 4
LINC00271-207ENST00000580741 SETD5Q9C0A6 1442 aa40.06■■■■■ 4
LINC00271-207ENST00000580741 TOM1O60784 492 aa40.04■■■■■ 4
LINC00271-207ENST00000580741 SCAF1Q9H7N4 1312 aaKnown RBP40.03■■■■■ 4
LINC00271-207ENST00000580741 PIP4K2BP78356 416 aa40.03■■■■■ 4
LINC00271-207ENST00000580741 MPHOSPH9Q99550 1183 aa40.01■■■■■ 4
LINC00271-207ENST00000580741 ADAMTS13Q76LX8 1427 aa39.99■■■■□ 3.99
LINC00271-207ENST00000580741 ALKQ9UM73 1620 aa39.98■■■■□ 3.99
LINC00271-207ENST00000580741 NWD1Q149M9 1564 aa39.97■■■■□ 3.99
LINC00271-207ENST00000580741 RBM33Q96EV2 1170 aaKnown RBP39.96■■■■□ 3.99
LINC00271-207ENST00000580741 TBX22Q9Y458 520 aa39.96■■■■□ 3.99
LINC00271-207ENST00000580741 KIF1BO60333 1816 aa39.95■■■■□ 3.99
LINC00271-207ENST00000580741 TMEM94Q12767 1356 aa39.95■■■■□ 3.99
LINC00271-207ENST00000580741 RAB3GAP2Q9H2M9 1393 aa39.95■■■■□ 3.99
LINC00271-207ENST00000580741 XIRP1Q702N8 1843 aaKnown RBP39.94■■■■□ 3.98
LINC00271-207ENST00000580741 PROSER2Q86WR7 435 aaPredicted RBP39.93■■■■□ 3.98
LINC00271-207ENST00000580741 NEXMIFQ5QGS0 1516 aa39.91■■■■□ 3.98
LINC00271-207ENST00000580741 NKTRP30414 1462 aaKnown RBP39.91■■■■□ 3.98
LINC00271-207ENST00000580741 DIP2AQ14689 1571 aa39.89■■■■□ 3.98
LINC00271-207ENST00000580741 CHD2O14647 1828 aaKnown RBP39.88■■■■□ 3.97
LINC00271-207ENST00000580741 NRXN3Q9Y4C0 1643 aa39.86■■■■□ 3.97
LINC00271-207ENST00000580741 SETBP1Q9Y6X0 1596 aa39.83■■■■□ 3.97
LINC00271-207ENST00000580741 CCDC144AA2RUR9 1427 aa39.82■■■■□ 3.97
LINC00271-207ENST00000580741 ACIN1Q9UKV3 1341 aaKnown RBP39.82■■■■□ 3.96
LINC00271-207ENST00000580741 HSPA1LP34931 641 aa39.8■■■■□ 3.96
LINC00271-207ENST00000580741 PIK3R4Q99570 1358 aa39.8■■■■□ 3.96
LINC00271-207ENST00000580741 PTPRUQ92729 1446 aa39.78■■■■□ 3.96
LINC00271-207ENST00000580741 AMOTL2Q9Y2J4 779 aa39.74■■■■□ 3.95
LINC00271-207ENST00000580741 METP08581 1390 aa39.72■■■■□ 3.95
LINC00271-207ENST00000580741 RPGRIP1LQ68CZ1 1315 aa39.72■■■■□ 3.95
LINC00271-207ENST00000580741 VGFO15240 615 aaPredicted RBP39.71■■■■□ 3.95
LINC00271-207ENST00000580741 RGL3Q3MIN7 710 aa39.7■■■■□ 3.95
LINC00271-207ENST00000580741 MSH6P52701 1360 aa39.69■■■■□ 3.94
LINC00271-207ENST00000580741 SPATA31E1Q6ZUB1 1445 aa39.68■■■■□ 3.94
LINC00271-207ENST00000580741 PPLO60437 1756 aa39.67■■■■□ 3.94
LINC00271-207ENST00000580741 C14orf37Q86TY3 774 aa39.64■■■■□ 3.94
LINC00271-207ENST00000580741 XRN1Q8IZH2 1706 aaKnown RBP39.63■■■■□ 3.94
LINC00271-207ENST00000580741 NCOA3Q9Y6Q9 1424 aa39.59■■■■□ 3.93
LINC00271-207ENST00000580741 HRCP23327 699 aa39.59■■■■□ 3.93
LINC00271-207ENST00000580741 ADGRF5Q8IZF2 1346 aa39.58■■■■□ 3.93
LINC00271-207ENST00000580741 FAM135BQ49AJ0 1406 aa39.56■■■■□ 3.92
LINC00271-207ENST00000580741 SETD1AO15047 1707 aaKnown RBP39.55■■■■□ 3.92
LINC00271-207ENST00000580741 DISP3Q9P2K9 1392 aa39.55■■■■□ 3.92
LINC00271-207ENST00000580741 IFT172Q9UG01 1749 aa39.51■■■■□ 3.92
LINC00271-207ENST00000580741 ANKRD30BQ9BXX2 1392 aa39.51■■■■□ 3.92
LINC00271-207ENST00000580741 SLAIN2Q9P270 581 aa39.51■■■■□ 3.92
LINC00271-207ENST00000580741 C19orf44Q9H6X5 657 aa39.5■■■■□ 3.91
LINC00271-207ENST00000580741 ROBO1Q9Y6N7 1651 aa39.5■■■■□ 3.91
LINC00271-207ENST00000580741 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.49■■■■□ 3.91
LINC00271-207ENST00000580741 ATF3P18847 181 aa39.45■■■■□ 3.91
LINC00271-207ENST00000580741 CADPS2Q86UW7 1296 aa39.44■■■■□ 3.9
LINC00271-207ENST00000580741 ROBO2Q9HCK4 1378 aa39.41■■■■□ 3.9
LINC00271-207ENST00000580741 PIK3C2GO75747 1445 aa39.4■■■■□ 3.9
LINC00271-207ENST00000580741 PTCH1Q13635 1447 aa39.4■■■■□ 3.9
LINC00271-207ENST00000580741 ADGRL3Q9HAR2 1447 aa39.36■■■■□ 3.89
LINC00271-207ENST00000580741 DCCP43146 1447 aa39.35■■■■□ 3.89
LINC00271-207ENST00000580741 MED1Q15648 1581 aaPredicted RBP39.34■■■■□ 3.89
LINC00271-207ENST00000580741 PRAG1Q86YV5 1406 aa39.33■■■■□ 3.89
LINC00271-207ENST00000580741 NALCNQ8IZF0 1738 aa39.33■■■■□ 3.89
LINC00271-207ENST00000580741 ASXL1Q8IXJ9 1541 aa39.33■■■■□ 3.89
LINC00271-207ENST00000580741 MYOM2P54296 1465 aa39.32■■■■□ 3.89
LINC00271-207ENST00000580741 TMEM132EQ6IEE7 984 aa39.32■■■■□ 3.89
LINC00271-207ENST00000580741 STK26Q9P289 416 aa39.31■■■■□ 3.88
LINC00271-207ENST00000580741 NRXN1Q9ULB1 1477 aa39.3■■■■□ 3.88
LINC00271-207ENST00000580741 MST1RQ04912 1400 aa39.27■■■■□ 3.88
LINC00271-207ENST00000580741 LRPPRCP42704 1394 aaKnown RBP39.25■■■■□ 3.87
LINC00271-207ENST00000580741 CFAP70Q5T0N1 1121 aa39.25■■■■□ 3.87
LINC00271-207ENST00000580741 PHLPP1O60346 1717 aa39.25■■■■□ 3.87
LINC00271-207ENST00000580741 BRINP3Q76B58 766 aa39.24■■■■□ 3.87
LINC00271-207ENST00000580741 C14orf93Q9H972 538 aaKnown RBP39.24■■■■□ 3.87
LINC00271-207ENST00000580741 ILDR2Q71H61 639 aa39.22■■■■□ 3.87
LINC00271-207ENST00000580741 KDM2AQ9Y2K7 1162 aa39.22■■■■□ 3.87
LINC00271-207ENST00000580741 DCAF11Q8TEB1 546 aa39.2■■■■□ 3.87
LINC00271-207ENST00000580741 TECPR2O15040 1411 aa39.2■■■■□ 3.87
LINC00271-207ENST00000580741 YTHDC2Q9H6S0 1430 aaKnown RBP39.19■■■■□ 3.86
LINC00271-207ENST00000580741 WAPLQ7Z5K2 1190 aa39.18■■■■□ 3.86
LINC00271-207ENST00000580741 ABCC11Q96J66 1382 aa39.18■■■■□ 3.86
LINC00271-207ENST00000580741 COL16A1Q07092 1604 aaPredicted RBP39.16■■■■□ 3.86
LINC00271-207ENST00000580741 DHX57Q6P158 1386 aaKnown RBP39.15■■■■□ 3.86
LINC00271-207ENST00000580741 PLEKHH1Q9ULM0 1364 aa39.15■■■■□ 3.86
LINC00271-207ENST00000580741 LAMC1P11047 1609 aa39.14■■■■□ 3.86
LINC00271-207ENST00000580741 AHDC1Q5TGY3 1603 aaPredicted RBP39.14■■■■□ 3.86
LINC00271-207ENST00000580741 KNDC1Q76NI1 1749 aa39.14■■■■□ 3.86
LINC00271-207ENST00000580741 C1orf167Q5SNV9 1468 aa39.11■■■■□ 3.85
LINC00271-207ENST00000580741 PHF23Q9BUL5 403 aaPredicted RBP39.1■■■■□ 3.85
LINC00271-207ENST00000580741 JCADQ9P266 1359 aa39.08■■■■□ 3.85
LINC00271-207ENST00000580741 DDX17Q92841 729 aaKnown RBP39.06■■■■□ 3.84
LINC00271-207ENST00000580741 CDC42BPGQ6DT37 1551 aa39.04■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms