RNA–Protein interactions for RNA: ENST00000580506.2

RN7SL543P-201, Transcript of RNA, 7SL, cytoplasmic 543, pseudogene, humanhuman

BASIC

Gene RN7SL543P, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL543P-201ENST00000580506 SLC26A8Q96RN1 970 aa16.1■□□□□ 0.17
RN7SL543P-201ENST00000580506 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
RN7SL543P-201ENST00000580506 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
RN7SL543P-201ENST00000580506 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
RN7SL543P-201ENST00000580506 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
RN7SL543P-201ENST00000580506 CLTCL1P53675 1640 aa16.08■□□□□ 0.17
RN7SL543P-201ENST00000580506 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.17
RN7SL543P-201ENST00000580506 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.08■□□□□ 0.16
RN7SL543P-201ENST00000580506 PLEKHG1Q9ULL1 1385 aa16.07■□□□□ 0.16
RN7SL543P-201ENST00000580506 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
RN7SL543P-201ENST00000580506 ZNF326Q5BKZ1 582 aaKnown RBP16.05■□□□□ 0.16
RN7SL543P-201ENST00000580506 TBX22Q9Y458 520 aa16.04■□□□□ 0.16
RN7SL543P-201ENST00000580506 BCANQ96GW7 911 aa16.03■□□□□ 0.16
RN7SL543P-201ENST00000580506 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
RN7SL543P-201ENST00000580506 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
RN7SL543P-201ENST00000580506 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.16
RN7SL543P-201ENST00000580506 KCNA6P17658 529 aa16.02■□□□□ 0.16
RN7SL543P-201ENST00000580506 CPS1P31327 1500 aa16.02■□□□□ 0.15
RN7SL543P-201ENST00000580506 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
RN7SL543P-201ENST00000580506 SPATA31E1Q6ZUB1 1445 aa16■□□□□ 0.15
RN7SL543P-201ENST00000580506 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
RN7SL543P-201ENST00000580506 CCDC144AA2RUR9 1427 aa15.99■□□□□ 0.15
RN7SL543P-201ENST00000580506 ANKRD30BQ9BXX2 1392 aa15.99■□□□□ 0.15
RN7SL543P-201ENST00000580506 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
RN7SL543P-201ENST00000580506 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
RN7SL543P-201ENST00000580506 UBAP1LF5GYI3 381 aa15.97■□□□□ 0.15
RN7SL543P-201ENST00000580506 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
RN7SL543P-201ENST00000580506 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
RN7SL543P-201ENST00000580506 PROSER2Q86WR7 435 aaPredicted RBP15.95■□□□□ 0.14
RN7SL543P-201ENST00000580506 KIF1BO60333 1816 aa15.95■□□□□ 0.14
RN7SL543P-201ENST00000580506 PTPRUQ92729 1446 aa15.94■□□□□ 0.14
RN7SL543P-201ENST00000580506 METP08581 1390 aa15.94■□□□□ 0.14
RN7SL543P-201ENST00000580506 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
RN7SL543P-201ENST00000580506 NRXN3Q9Y4C0 1643 aa15.94■□□□□ 0.14
RN7SL543P-201ENST00000580506 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
RN7SL543P-201ENST00000580506 TMEM94Q12767 1356 aa15.93■□□□□ 0.14
RN7SL543P-201ENST00000580506 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
RN7SL543P-201ENST00000580506 TRIM26Q12899 539 aaPredicted RBP15.93■□□□□ 0.14
RN7SL543P-201ENST00000580506 AMOTL2Q9Y2J4 779 aa15.92■□□□□ 0.14
RN7SL543P-201ENST00000580506 ALKQ9UM73 1620 aa15.92■□□□□ 0.14
RN7SL543P-201ENST00000580506 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
RN7SL543P-201ENST00000580506 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
RN7SL543P-201ENST00000580506 TOM1O60784 492 aa15.9■□□□□ 0.14
RN7SL543P-201ENST00000580506 DIP2AQ14689 1571 aa15.9■□□□□ 0.14
RN7SL543P-201ENST00000580506 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
RN7SL543P-201ENST00000580506 XIRP1Q702N8 1843 aaKnown RBP15.88■□□□□ 0.13
RN7SL543P-201ENST00000580506 PPLO60437 1756 aa15.87■□□□□ 0.13
RN7SL543P-201ENST00000580506 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
RN7SL543P-201ENST00000580506 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
RN7SL543P-201ENST00000580506 NCOA3Q9Y6Q9 1424 aa15.84■□□□□ 0.13
RN7SL543P-201ENST00000580506 C14orf93Q9H972 538 aaKnown RBP15.83■□□□□ 0.12
RN7SL543P-201ENST00000580506 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 PIK3C2GO75747 1445 aa15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 NRXN1Q9ULB1 1477 aa15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
RN7SL543P-201ENST00000580506 HSPA1LP34931 641 aa15.81■□□□□ 0.12
RN7SL543P-201ENST00000580506 C19orf44Q9H6X5 657 aa15.81■□□□□ 0.12
RN7SL543P-201ENST00000580506 ROBO2Q9HCK4 1378 aa15.8■□□□□ 0.12
RN7SL543P-201ENST00000580506 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
RN7SL543P-201ENST00000580506 DCAF11Q8TEB1 546 aa15.8■□□□□ 0.12
RN7SL543P-201ENST00000580506 SIN3AQ96ST3 1273 aa15.8■□□□□ 0.12
RN7SL543P-201ENST00000580506 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
RN7SL543P-201ENST00000580506 MYOM2P54296 1465 aa15.79■□□□□ 0.12
RN7SL543P-201ENST00000580506 MSH6P52701 1360 aa15.79■□□□□ 0.12
RN7SL543P-201ENST00000580506 SLAIN2Q9P270 581 aa15.79■□□□□ 0.12
RN7SL543P-201ENST00000580506 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.12
RN7SL543P-201ENST00000580506 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
RN7SL543P-201ENST00000580506 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
RN7SL543P-201ENST00000580506 STK26Q9P289 416 aa15.77■□□□□ 0.12
RN7SL543P-201ENST00000580506 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.11
RN7SL543P-201ENST00000580506 LRPPRCP42704 1394 aaKnown RBP15.76■□□□□ 0.11
RN7SL543P-201ENST00000580506 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
RN7SL543P-201ENST00000580506 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
RN7SL543P-201ENST00000580506 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
RN7SL543P-201ENST00000580506 ATF3P18847 181 aa15.74■□□□□ 0.11
RN7SL543P-201ENST00000580506 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
RN7SL543P-201ENST00000580506 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
RN7SL543P-201ENST00000580506 TECPR2O15040 1411 aa15.73■□□□□ 0.11
RN7SL543P-201ENST00000580506 YTHDC2Q9H6S0 1430 aaKnown RBP15.73■□□□□ 0.11
RN7SL543P-201ENST00000580506 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
RN7SL543P-201ENST00000580506 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
RN7SL543P-201ENST00000580506 L3MBTL2Q969R5 705 aa15.72■□□□□ 0.11
RN7SL543P-201ENST00000580506 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
RN7SL543P-201ENST00000580506 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
RN7SL543P-201ENST00000580506 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
RN7SL543P-201ENST00000580506 DCCP43146 1447 aa15.7■□□□□ 0.1
RN7SL543P-201ENST00000580506 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
RN7SL543P-201ENST00000580506 ADGRB1O14514 1584 aa15.69■□□□□ 0.1
RN7SL543P-201ENST00000580506 MST1RQ04912 1400 aa15.68■□□□□ 0.1
RN7SL543P-201ENST00000580506 BRINP3Q76B58 766 aa15.68■□□□□ 0.1
RN7SL543P-201ENST00000580506 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
RN7SL543P-201ENST00000580506 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
RN7SL543P-201ENST00000580506 NALCNQ8IZF0 1738 aa15.65■□□□□ 0.1
RN7SL543P-201ENST00000580506 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
RN7SL543P-201ENST00000580506 TRAK1Q9UPV9 953 aa15.65■□□□□ 0.1
RN7SL543P-201ENST00000580506 LAMC1P11047 1609 aa15.64■□□□□ 0.09
RN7SL543P-201ENST00000580506 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms