RNA–Protein interactions for RNA: ENST00000580308.5

EPB41L3-218, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 4

Gene EPB41L3, Length 492 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-218	ENST00000580308	PLEKHG1	Q9ULL1	1385 aa		40.91	■■■■■ 4.14
EPB41L3-218	ENST00000580308	NWD1	Q149M9	1564 aa		40.9	■■■■■ 4.14
EPB41L3-218	ENST00000580308	SLC26A8	Q96RN1	970 aa		40.89	■■■■■ 4.14
EPB41L3-218	ENST00000580308	PIP4K2B	P78356	416 aa		40.85	■■■■■ 4.13
EPB41L3-218	ENST00000580308	KCNA6	P17658	529 aa		40.84	■■■■■ 4.13
EPB41L3-218	ENST00000580308	CHGA	P10645	457 aa	Known RBP	40.81	■■■■■ 4.12
EPB41L3-218	ENST00000580308	NKTR	P30414	1462 aa	Known RBP	40.8	■■■■■ 4.12
EPB41L3-218	ENST00000580308	HDGF	P51858	240 aa	Known RBP	40.8	■■■■■ 4.12
EPB41L3-218	ENST00000580308	SCAF1	Q9H7N4	1312 aa	Known RBP	40.8	■■■■■ 4.12
EPB41L3-218	ENST00000580308	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	40.78	■■■■■ 4.12
EPB41L3-218	ENST00000580308	HSPA1L	P34931	641 aa		40.77	■■■■■ 4.12
EPB41L3-218	ENST00000580308	TRPM2	O94759	1503 aa		40.77	■■■■■ 4.12
EPB41L3-218	ENST00000580308	PPP1R15A	O75807	674 aa	Predicted RBP	40.76	■■■■■ 4.12
EPB41L3-218	ENST00000580308	CHD2	O14647	1828 aa	Known RBP	40.76	■■■■■ 4.12
EPB41L3-218	ENST00000580308	TMEM94	Q12767	1356 aa		40.75	■■■■■ 4.11
EPB41L3-218	ENST00000580308	ADAMTS13	Q76LX8	1427 aa		40.75	■■■■■ 4.11
EPB41L3-218	ENST00000580308	CLTCL1	P53675	1640 aa		40.74	■■■■■ 4.11
EPB41L3-218	ENST00000580308	DISP3	Q9P2K9	1392 aa		40.73	■■■■■ 4.11
EPB41L3-218	ENST00000580308	BCAN	Q96GW7	911 aa		40.72	■■■■■ 4.11
EPB41L3-218	ENST00000580308	DIP2A	Q14689	1571 aa		40.72	■■■■■ 4.11
EPB41L3-218	ENST00000580308	SENP3	Q9H4L4	574 aa	Predicted RBP	40.69	■■■■■ 4.1
EPB41L3-218	ENST00000580308	TBX22	Q9Y458	520 aa		40.69	■■■■■ 4.1
EPB41L3-218	ENST00000580308	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.68	■■■■■ 4.1
EPB41L3-218	ENST00000580308	PROSER2	Q86WR7	435 aa	Predicted RBP	40.64	■■■■■ 4.1
EPB41L3-218	ENST00000580308	NRXN3	Q9Y4C0	1643 aa		40.63	■■■■■ 4.09
EPB41L3-218	ENST00000580308	TRIM52	Q96A61	297 aa		40.61	■■■■■ 4.09
EPB41L3-218	ENST00000580308	SETBP1	Q9Y6X0	1596 aa		40.6	■■■■■ 4.09
EPB41L3-218	ENST00000580308	PIK3R4	Q99570	1358 aa		40.6	■■■■■ 4.09
EPB41L3-218	ENST00000580308	RBM33	Q96EV2	1170 aa	Known RBP	40.59	■■■■■ 4.09
EPB41L3-218	ENST00000580308	NEXMIF	Q5QGS0	1516 aa		40.58	■■■■■ 4.09
EPB41L3-218	ENST00000580308	KIF1B	O60333	1816 aa		40.58	■■■■■ 4.09
EPB41L3-218	ENST00000580308	FAM135B	Q49AJ0	1406 aa		40.53	■■■■■ 4.08
EPB41L3-218	ENST00000580308	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40.53	■■■■■ 4.08
EPB41L3-218	ENST00000580308	MED1	Q15648	1581 aa	Predicted RBP	40.5	■■■■■ 4.07
EPB41L3-218	ENST00000580308	PTPRU	Q92729	1446 aa		40.5	■■■■■ 4.07
EPB41L3-218	ENST00000580308	NCOA3	Q9Y6Q9	1424 aa		40.5	■■■■■ 4.07
EPB41L3-218	ENST00000580308	ZNF326	Q5BKZ1	582 aa	Known RBP	40.49	■■■■■ 4.07
EPB41L3-218	ENST00000580308	ILDR2	Q71H61	639 aa		40.49	■■■■■ 4.07
EPB41L3-218	ENST00000580308	MSH6	P52701	1360 aa		40.48	■■■■■ 4.07
EPB41L3-218	ENST00000580308	XRN1	Q8IZH2	1706 aa	Known RBP	40.46	■■■■■ 4.07
EPB41L3-218	ENST00000580308	ROBO1	Q9Y6N7	1651 aa		40.45	■■■■■ 4.07
EPB41L3-218	ENST00000580308	AMOTL2	Q9Y2J4	779 aa		40.38	■■■■■ 4.05
EPB41L3-218	ENST00000580308	MET	P08581	1390 aa		40.36	■■■■■ 4.05
EPB41L3-218	ENST00000580308	FOXD1	Q16676	465 aa		40.35	■■■■■ 4.05
EPB41L3-218	ENST00000580308	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.35	■■■■■ 4.05
EPB41L3-218	ENST00000580308	PPL	O60437	1756 aa		40.33	■■■■■ 4.05
EPB41L3-218	ENST00000580308	SETD1A	O15047	1707 aa	Known RBP	40.33	■■■■■ 4.05
EPB41L3-218	ENST00000580308	MPHOSPH9	Q99550	1183 aa		40.32	■■■■■ 4.05
EPB41L3-218	ENST00000580308	SLAIN2	Q9P270	581 aa		40.31	■■■■■ 4.04
EPB41L3-218	ENST00000580308	SETD5	Q9C0A6	1442 aa		40.31	■■■■■ 4.04
EPB41L3-218	ENST00000580308	RPGRIP1L	Q68CZ1	1315 aa		40.29	■■■■■ 4.04
EPB41L3-218	ENST00000580308	C19orf44	Q9H6X5	657 aa		40.26	■■■■■ 4.04
EPB41L3-218	ENST00000580308	CCDC144A	A2RUR9	1427 aa		40.25	■■■■■ 4.03
EPB41L3-218	ENST00000580308	VGF	O15240	615 aa	Predicted RBP	40.25	■■■■■ 4.03
EPB41L3-218	ENST00000580308	ACIN1	Q9UKV3	1341 aa	Known RBP	40.24	■■■■■ 4.03
EPB41L3-218	ENST00000580308	SPATA31E1	Q6ZUB1	1445 aa		40.24	■■■■■ 4.03
EPB41L3-218	ENST00000580308	C14orf37	Q86TY3	774 aa		40.23	■■■■■ 4.03
EPB41L3-218	ENST00000580308	DCC	P43146	1447 aa		40.21	■■■■■ 4.03
EPB41L3-218	ENST00000580308	CADPS2	Q86UW7	1296 aa		40.2	■■■■■ 4.03
EPB41L3-218	ENST00000580308	PHLPP1	O60346	1717 aa		40.18	■■■■■ 4.02
EPB41L3-218	ENST00000580308	IFT172	Q9UG01	1749 aa		40.18	■■■■■ 4.02
EPB41L3-218	ENST00000580308	RAB3GAP2	Q9H2M9	1393 aa		40.18	■■■■■ 4.02
EPB41L3-218	ENST00000580308	PRAG1	Q86YV5	1406 aa		40.16	■■■■■ 4.02
EPB41L3-218	ENST00000580308	ATF3	P18847	181 aa		40.14	■■■■■ 4.02
EPB41L3-218	ENST00000580308	COL16A1	Q07092	1604 aa	Predicted RBP	40.13	■■■■■ 4.02
EPB41L3-218	ENST00000580308	PTCH1	Q13635	1447 aa		40.13	■■■■■ 4.01
EPB41L3-218	ENST00000580308	NALCN	Q8IZF0	1738 aa		40.13	■■■■■ 4.01
EPB41L3-218	ENST00000580308	SOCS7	O14512	581 aa		40.12	■■■■■ 4.01
EPB41L3-218	ENST00000580308	ADGRL3	Q9HAR2	1447 aa		40.12	■■■■■ 4.01
EPB41L3-218	ENST00000580308	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.1	■■■■■ 4.01
EPB41L3-218	ENST00000580308	MST1R	Q04912	1400 aa		40.07	■■■■■ 4
EPB41L3-218	ENST00000580308	ADGRF5	Q8IZF2	1346 aa		40.06	■■■■■ 4
EPB41L3-218	ENST00000580308	ANKRD30B	Q9BXX2	1392 aa		40.05	■■■■■ 4
EPB41L3-218	ENST00000580308	ROBO2	Q9HCK4	1378 aa		40.05	■■■■■ 4
EPB41L3-218	ENST00000580308	PHF23	Q9BUL5	403 aa	Predicted RBP	40.03	■■■■■ 4
EPB41L3-218	ENST00000580308	RGL3	Q3MIN7	710 aa		40.02	■■■■■ 4
EPB41L3-218	ENST00000580308	BRINP3	Q76B58	766 aa		40	■■■■□ 3.99
EPB41L3-218	ENST00000580308	ASXL1	Q8IXJ9	1541 aa		40	■■■■□ 3.99
EPB41L3-218	ENST00000580308	JCAD	Q9P266	1359 aa		39.99	■■■■□ 3.99
EPB41L3-218	ENST00000580308	PIK3C2G	O75747	1445 aa		39.98	■■■■□ 3.99
EPB41L3-218	ENST00000580308	RGS17	Q9UGC6	210 aa	Predicted RBP	39.94	■■■■□ 3.98
EPB41L3-218	ENST00000580308	NHSL1	Q5SYE7	1610 aa		39.94	■■■■□ 3.98
EPB41L3-218	ENST00000580308	NRXN1	Q9ULB1	1477 aa		39.91	■■■■□ 3.98
EPB41L3-218	ENST00000580308	TECPR2	O15040	1411 aa		39.91	■■■■□ 3.98
EPB41L3-218	ENST00000580308	SHPRH	Q149N8	1683 aa		39.9	■■■■□ 3.98
EPB41L3-218	ENST00000580308	HRC	P23327	699 aa		39.9	■■■■□ 3.98
EPB41L3-218	ENST00000580308	MYOM2	P54296	1465 aa		39.88	■■■■□ 3.98
EPB41L3-218	ENST00000580308	KNDC1	Q76NI1	1749 aa		39.88	■■■■□ 3.97
EPB41L3-218	ENST00000580308	C1orf167	Q5SNV9	1468 aa		39.86	■■■■□ 3.97
EPB41L3-218	ENST00000580308	LRPPRC	P42704	1394 aa	Known RBP	39.84	■■■■□ 3.97
EPB41L3-218	ENST00000580308	LRP6	O75581	1613 aa		39.82	■■■■□ 3.96
EPB41L3-218	ENST00000580308	CDC42BPG	Q6DT37	1551 aa		39.81	■■■■□ 3.96
EPB41L3-218	ENST00000580308	LAMC1	P11047	1609 aa		39.81	■■■■□ 3.96
EPB41L3-218	ENST00000580308	SPATA31A6	Q5VVP1	1343 aa		39.8	■■■■□ 3.96
EPB41L3-218	ENST00000580308	ABCC11	Q96J66	1382 aa		39.8	■■■■□ 3.96
EPB41L3-218	ENST00000580308	TMEM132E	Q6IEE7	984 aa		39.76	■■■■□ 3.96
EPB41L3-218	ENST00000580308	YTHDC2	Q9H6S0	1430 aa	Known RBP	39.75	■■■■□ 3.95
EPB41L3-218	ENST00000580308	C14orf93	Q9H972	538 aa	Known RBP	39.75	■■■■□ 3.95
EPB41L3-218	ENST00000580308	STK26	Q9P289	416 aa		39.72	■■■■□ 3.95
EPB41L3-218	ENST00000580308	DDX17	Q92841	729 aa	Known RBP	39.7	■■■■□ 3.95

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms