RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
CBX3P2-201ENST00000579647 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
CBX3P2-201ENST00000579647 BCANQ96GW7 911 aa25.03■■□□□ 1.6
CBX3P2-201ENST00000579647 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
CBX3P2-201ENST00000579647 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
CBX3P2-201ENST00000579647 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
CBX3P2-201ENST00000579647 IQGAP1P46940 1657 aa25.02■■□□□ 1.6
CBX3P2-201ENST00000579647 ZNF335Q9H4Z2 1342 aaPredicted RBP25.01■■□□□ 1.59
CBX3P2-201ENST00000579647 KIF1BO60333 1816 aa25.01■■□□□ 1.59
CBX3P2-201ENST00000579647 RGL3Q3MIN7 710 aa24.97■■□□□ 1.59
CBX3P2-201ENST00000579647 SLC26A8Q96RN1 970 aa24.97■■□□□ 1.59
CBX3P2-201ENST00000579647 ANKRD30BQ9BXX2 1392 aa24.96■■□□□ 1.59
CBX3P2-201ENST00000579647 PLEKHG1Q9ULL1 1385 aa24.94■■□□□ 1.58
CBX3P2-201ENST00000579647 CERKQ8TCT0 537 aa24.93■■□□□ 1.58
CBX3P2-201ENST00000579647 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
CBX3P2-201ENST00000579647 RPGRIP1LQ68CZ1 1315 aa24.91■■□□□ 1.58
CBX3P2-201ENST00000579647 LTBP4Q8N2S1 1624 aa24.91■■□□□ 1.58
CBX3P2-201ENST00000579647 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
CBX3P2-201ENST00000579647 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.57
CBX3P2-201ENST00000579647 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
CBX3P2-201ENST00000579647 TBX22Q9Y458 520 aa24.86■■□□□ 1.57
CBX3P2-201ENST00000579647 ADAMTS13Q76LX8 1427 aa24.83■■□□□ 1.57
CBX3P2-201ENST00000579647 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
CBX3P2-201ENST00000579647 KCNA6P17658 529 aa24.81■■□□□ 1.56
CBX3P2-201ENST00000579647 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
CBX3P2-201ENST00000579647 PPLO60437 1756 aa24.8■■□□□ 1.56
CBX3P2-201ENST00000579647 ADGRF5Q8IZF2 1346 aa24.8■■□□□ 1.56
CBX3P2-201ENST00000579647 CPS1P31327 1500 aa24.78■■□□□ 1.56
CBX3P2-201ENST00000579647 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
CBX3P2-201ENST00000579647 SETBP1Q9Y6X0 1596 aa24.76■■□□□ 1.55
CBX3P2-201ENST00000579647 NRXN3Q9Y4C0 1643 aa24.76■■□□□ 1.55
CBX3P2-201ENST00000579647 KDM2AQ9Y2K7 1162 aa24.75■■□□□ 1.55
CBX3P2-201ENST00000579647 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
CBX3P2-201ENST00000579647 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
CBX3P2-201ENST00000579647 PROSER2Q86WR7 435 aaPredicted RBP24.73■■□□□ 1.55
CBX3P2-201ENST00000579647 DCAF11Q8TEB1 546 aa24.73■■□□□ 1.55
CBX3P2-201ENST00000579647 METP08581 1390 aa24.72■■□□□ 1.55
CBX3P2-201ENST00000579647 LRRC7Q96NW7 1537 aa24.72■■□□□ 1.55
CBX3P2-201ENST00000579647 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
CBX3P2-201ENST00000579647 RBM33Q96EV2 1170 aaKnown RBP24.72■■□□□ 1.55
CBX3P2-201ENST00000579647 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
CBX3P2-201ENST00000579647 AMOTL2Q9Y2J4 779 aa24.71■■□□□ 1.55
CBX3P2-201ENST00000579647 PIK3R4Q99570 1358 aa24.71■■□□□ 1.55
CBX3P2-201ENST00000579647 PTPRUQ92729 1446 aa24.7■■□□□ 1.54
CBX3P2-201ENST00000579647 FBXO41Q8TF61 875 aa24.69■■□□□ 1.54
CBX3P2-201ENST00000579647 ALKQ9UM73 1620 aa24.69■■□□□ 1.54
CBX3P2-201ENST00000579647 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
CBX3P2-201ENST00000579647 NWD1Q149M9 1564 aa24.68■■□□□ 1.54
CBX3P2-201ENST00000579647 ILDR1Q86SU0 546 aaPredicted RBP24.66■■□□□ 1.54
CBX3P2-201ENST00000579647 TMEM94Q12767 1356 aa24.65■■□□□ 1.54
CBX3P2-201ENST00000579647 MYOM2P54296 1465 aa24.65■■□□□ 1.54
CBX3P2-201ENST00000579647 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
CBX3P2-201ENST00000579647 PIK3C2GO75747 1445 aa24.64■■□□□ 1.54
CBX3P2-201ENST00000579647 CFAP70Q5T0N1 1121 aa24.64■■□□□ 1.54
CBX3P2-201ENST00000579647 NKTRP30414 1462 aaKnown RBP24.63■■□□□ 1.53
CBX3P2-201ENST00000579647 TMEM132EQ6IEE7 984 aa24.63■■□□□ 1.53
CBX3P2-201ENST00000579647 C14orf93Q9H972 538 aaKnown RBP24.63■■□□□ 1.53
CBX3P2-201ENST00000579647 STAC3Q96MF2 364 aa24.62■■□□□ 1.53
CBX3P2-201ENST00000579647 SETD1AO15047 1707 aaKnown RBP24.62■■□□□ 1.53
CBX3P2-201ENST00000579647 NRXN1Q9ULB1 1477 aa24.61■■□□□ 1.53
CBX3P2-201ENST00000579647 XIRP1Q702N8 1843 aaKnown RBP24.6■■□□□ 1.53
CBX3P2-201ENST00000579647 L3MBTL2Q969R5 705 aa24.6■■□□□ 1.53
CBX3P2-201ENST00000579647 STK26Q9P289 416 aa24.59■■□□□ 1.53
CBX3P2-201ENST00000579647 TOM1O60784 492 aa24.58■■□□□ 1.53
CBX3P2-201ENST00000579647 C14orf37Q86TY3 774 aa24.57■■□□□ 1.52
CBX3P2-201ENST00000579647 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
CBX3P2-201ENST00000579647 PIP4K2BP78356 416 aa24.53■■□□□ 1.52
CBX3P2-201ENST00000579647 ASXL1Q8IXJ9 1541 aa24.52■■□□□ 1.52
CBX3P2-201ENST00000579647 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
CBX3P2-201ENST00000579647 MSH6P52701 1360 aa24.52■■□□□ 1.52
CBX3P2-201ENST00000579647 ROBO2Q9HCK4 1378 aa24.52■■□□□ 1.52
CBX3P2-201ENST00000579647 LRPPRCP42704 1394 aaKnown RBP24.51■■□□□ 1.51
CBX3P2-201ENST00000579647 NCOA3Q9Y6Q9 1424 aa24.51■■□□□ 1.51
CBX3P2-201ENST00000579647 YTHDC2Q9H6S0 1430 aaKnown RBP24.5■■□□□ 1.51
CBX3P2-201ENST00000579647 C19orf44Q9H6X5 657 aa24.49■■□□□ 1.51
CBX3P2-201ENST00000579647 LAMC1P11047 1609 aa24.49■■□□□ 1.51
CBX3P2-201ENST00000579647 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
CBX3P2-201ENST00000579647 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
CBX3P2-201ENST00000579647 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
CBX3P2-201ENST00000579647 PTCH1Q13635 1447 aa24.46■■□□□ 1.51
CBX3P2-201ENST00000579647 TONSLQ96HA7 1378 aa24.46■■□□□ 1.51
CBX3P2-201ENST00000579647 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
CBX3P2-201ENST00000579647 ATF3P18847 181 aa24.44■■□□□ 1.5
CBX3P2-201ENST00000579647 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
CBX3P2-201ENST00000579647 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
CBX3P2-201ENST00000579647 TECPR2O15040 1411 aa24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 ADGRB1O14514 1584 aa24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 CADPS2Q86UW7 1296 aa24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 SLAIN2Q9P270 581 aa24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
CBX3P2-201ENST00000579647 SIRT1Q96EB6 747 aa24.41■■□□□ 1.5
CBX3P2-201ENST00000579647 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
CBX3P2-201ENST00000579647 ADGRL3Q9HAR2 1447 aa24.39■■□□□ 1.5
CBX3P2-201ENST00000579647 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.5
CBX3P2-201ENST00000579647 PRAM1Q96QH2 718 aa24.39■■□□□ 1.5
CBX3P2-201ENST00000579647 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.49
CBX3P2-201ENST00000579647 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
CBX3P2-201ENST00000579647 POGKQ9P215 609 aa24.38■■□□□ 1.49
CBX3P2-201ENST00000579647 NALCNQ8IZF0 1738 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms