RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 ZFYVE9O95405 1425 aa29.53■■■□□ 2.32
USH1G-201ENST00000579243 TRPM2O94759 1503 aa29.53■■■□□ 2.32
USH1G-201ENST00000579243 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
USH1G-201ENST00000579243 ZEB1P37275 1124 aaPredicted RBP29.52■■■□□ 2.32
USH1G-201ENST00000579243 RIMS2Q9UQ26 1411 aa29.52■■■□□ 2.32
USH1G-201ENST00000579243 FOXD1Q16676 465 aa29.51■■■□□ 2.31
USH1G-201ENST00000579243 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.48■■■□□ 2.31
USH1G-201ENST00000579243 CLTCL1P53675 1640 aa29.47■■■□□ 2.31
USH1G-201ENST00000579243 PPP1R15AO75807 674 aaPredicted RBP29.46■■■□□ 2.31
USH1G-201ENST00000579243 NUTM2DQ5VT03 806 aaPredicted RBP29.44■■■□□ 2.3
USH1G-201ENST00000579243 CCER1Q8TC90 406 aaPredicted RBP29.44■■■□□ 2.3
USH1G-201ENST00000579243 SLC26A8Q96RN1 970 aa29.43■■■□□ 2.3
USH1G-201ENST00000579243 PLEKHG1Q9ULL1 1385 aa29.43■■■□□ 2.3
USH1G-201ENST00000579243 ZNF326Q5BKZ1 582 aaKnown RBP29.42■■■□□ 2.3
USH1G-201ENST00000579243 BCANQ96GW7 911 aa29.42■■■□□ 2.3
USH1G-201ENST00000579243 IQSEC2Q5JU85 1478 aa29.42■■■□□ 2.3
USH1G-201ENST00000579243 CPS1P31327 1500 aa29.41■■■□□ 2.3
USH1G-201ENST00000579243 SENP3Q9H4L4 574 aaPredicted RBP29.4■■■□□ 2.3
USH1G-201ENST00000579243 KIF1BO60333 1816 aa29.36■■■□□ 2.29
USH1G-201ENST00000579243 STRCP1A6NGW2 1772 aa29.35■■■□□ 2.29
USH1G-201ENST00000579243 CCDC144AA2RUR9 1427 aa29.34■■■□□ 2.29
USH1G-201ENST00000579243 TBX22Q9Y458 520 aa29.32■■■□□ 2.28
USH1G-201ENST00000579243 KCNA6P17658 529 aa29.31■■■□□ 2.28
USH1G-201ENST00000579243 ADAMTS13Q76LX8 1427 aa29.29■■■□□ 2.28
USH1G-201ENST00000579243 NEXMIFQ5QGS0 1516 aa29.29■■■□□ 2.28
USH1G-201ENST00000579243 LRRC7Q96NW7 1537 aa29.29■■■□□ 2.28
USH1G-201ENST00000579243 RPGRIP1LQ68CZ1 1315 aa29.28■■■□□ 2.28
USH1G-201ENST00000579243 UBAP1LF5GYI3 381 aa29.24■■■□□ 2.27
USH1G-201ENST00000579243 VGFO15240 615 aaPredicted RBP29.24■■■□□ 2.27
USH1G-201ENST00000579243 SPATA31E1Q6ZUB1 1445 aa29.23■■■□□ 2.27
USH1G-201ENST00000579243 DIP2AQ14689 1571 aa29.22■■■□□ 2.27
USH1G-201ENST00000579243 RGL3Q3MIN7 710 aa29.21■■■□□ 2.27
USH1G-201ENST00000579243 ANKRD30BQ9BXX2 1392 aa29.21■■■□□ 2.27
USH1G-201ENST00000579243 SETBP1Q9Y6X0 1596 aa29.2■■■□□ 2.27
USH1G-201ENST00000579243 PIK3R4Q99570 1358 aa29.19■■■□□ 2.26
USH1G-201ENST00000579243 NWD1Q149M9 1564 aa29.19■■■□□ 2.26
USH1G-201ENST00000579243 NRXN3Q9Y4C0 1643 aa29.19■■■□□ 2.26
USH1G-201ENST00000579243 PROSER2Q86WR7 435 aaPredicted RBP29.18■■■□□ 2.26
USH1G-201ENST00000579243 CHD2O14647 1828 aaKnown RBP29.18■■■□□ 2.26
USH1G-201ENST00000579243 DHX57Q6P158 1386 aaKnown RBP29.17■■■□□ 2.26
USH1G-201ENST00000579243 NKTRP30414 1462 aaKnown RBP29.16■■■□□ 2.26
USH1G-201ENST00000579243 TMEM94Q12767 1356 aa29.16■■■□□ 2.26
USH1G-201ENST00000579243 TOM1O60784 492 aa29.15■■■□□ 2.26
USH1G-201ENST00000579243 PPLO60437 1756 aa29.14■■■□□ 2.25
USH1G-201ENST00000579243 RBM33Q96EV2 1170 aaKnown RBP29.12■■■□□ 2.25
USH1G-201ENST00000579243 AMOTL2Q9Y2J4 779 aa29.12■■■□□ 2.25
USH1G-201ENST00000579243 METP08581 1390 aa29.12■■■□□ 2.25
USH1G-201ENST00000579243 PTPRUQ92729 1446 aa29.12■■■□□ 2.25
USH1G-201ENST00000579243 XIRP1Q702N8 1843 aaKnown RBP29.11■■■□□ 2.25
USH1G-201ENST00000579243 ADGRF5Q8IZF2 1346 aa29.1■■■□□ 2.25
USH1G-201ENST00000579243 CLSPNQ9HAW4 1339 aa29.08■■■□□ 2.25
USH1G-201ENST00000579243 PIP4K2BP78356 416 aa29.06■■■□□ 2.24
USH1G-201ENST00000579243 ALKQ9UM73 1620 aa29.06■■■□□ 2.24
USH1G-201ENST00000579243 IFT172Q9UG01 1749 aa29.04■■■□□ 2.24
USH1G-201ENST00000579243 SCAF1Q9H7N4 1312 aaKnown RBP29.03■■■□□ 2.24
USH1G-201ENST00000579243 NCOA3Q9Y6Q9 1424 aa29.01■■■□□ 2.24
USH1G-201ENST00000579243 SETD1AO15047 1707 aaKnown RBP28.99■■■□□ 2.23
USH1G-201ENST00000579243 XRN1Q8IZH2 1706 aaKnown RBP28.99■■■□□ 2.23
USH1G-201ENST00000579243 MSH6P52701 1360 aa28.98■■■□□ 2.23
USH1G-201ENST00000579243 PIK3C2GO75747 1445 aa28.97■■■□□ 2.23
USH1G-201ENST00000579243 MYOM2P54296 1465 aa28.95■■■□□ 2.23
USH1G-201ENST00000579243 C14orf37Q86TY3 774 aa28.95■■■□□ 2.22
USH1G-201ENST00000579243 NRXN1Q9ULB1 1477 aa28.94■■■□□ 2.22
USH1G-201ENST00000579243 C19orf44Q9H6X5 657 aa28.93■■■□□ 2.22
USH1G-201ENST00000579243 DCAF11Q8TEB1 546 aa28.93■■■□□ 2.22
USH1G-201ENST00000579243 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
USH1G-201ENST00000579243 KDM2AQ9Y2K7 1162 aa28.9■■■□□ 2.22
USH1G-201ENST00000579243 STAC3Q96MF2 364 aa28.89■■■□□ 2.22
USH1G-201ENST00000579243 HSPA1LP34931 641 aa28.89■■■□□ 2.21
USH1G-201ENST00000579243 TMEM132EQ6IEE7 984 aa28.89■■■□□ 2.21
USH1G-201ENST00000579243 PRAG1Q86YV5 1406 aa28.88■■■□□ 2.21
USH1G-201ENST00000579243 CFAP70Q5T0N1 1121 aa28.88■■■□□ 2.21
USH1G-201ENST00000579243 SLAIN2Q9P270 581 aa28.88■■■□□ 2.21
USH1G-201ENST00000579243 PTCH1Q13635 1447 aa28.88■■■□□ 2.21
USH1G-201ENST00000579243 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
USH1G-201ENST00000579243 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
USH1G-201ENST00000579243 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
USH1G-201ENST00000579243 ATF3P18847 181 aa28.85■■■□□ 2.21
USH1G-201ENST00000579243 STK26Q9P289 416 aa28.84■■■□□ 2.21
USH1G-201ENST00000579243 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.84■■■□□ 2.21
USH1G-201ENST00000579243 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
USH1G-201ENST00000579243 LRPPRCP42704 1394 aaKnown RBP28.83■■■□□ 2.21
USH1G-201ENST00000579243 ABCC11Q96J66 1382 aa28.82■■■□□ 2.2
USH1G-201ENST00000579243 SIN3AQ96ST3 1273 aa28.81■■■□□ 2.2
USH1G-201ENST00000579243 DCCP43146 1447 aa28.8■■■□□ 2.2
USH1G-201ENST00000579243 ADGRL3Q9HAR2 1447 aa28.8■■■□□ 2.2
USH1G-201ENST00000579243 TECPR2O15040 1411 aa28.8■■■□□ 2.2
USH1G-201ENST00000579243 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
USH1G-201ENST00000579243 LAMC1P11047 1609 aa28.78■■■□□ 2.2
USH1G-201ENST00000579243 ROBO1Q9Y6N7 1651 aa28.75■■■□□ 2.19
USH1G-201ENST00000579243 WAPLQ7Z5K2 1190 aa28.75■■■□□ 2.19
USH1G-201ENST00000579243 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
USH1G-201ENST00000579243 SIRT1Q96EB6 747 aa28.74■■■□□ 2.19
USH1G-201ENST00000579243 NALCNQ8IZF0 1738 aa28.73■■■□□ 2.19
USH1G-201ENST00000579243 L3MBTL2Q969R5 705 aa28.71■■■□□ 2.19
USH1G-201ENST00000579243 KNDC1Q76NI1 1749 aa28.71■■■□□ 2.19
USH1G-201ENST00000579243 ADGRB1O14514 1584 aa28.7■■■□□ 2.19
USH1G-201ENST00000579243 MST1RQ04912 1400 aa28.7■■■□□ 2.18
USH1G-201ENST00000579243 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
USH1G-201ENST00000579243 BRINP3Q76B58 766 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms