RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 CLTCL1P53675 1640 aa15.79■□□□□ 0.12
ERBB2-207ENST00000578502 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
ERBB2-207ENST00000578502 TRPM2O94759 1503 aa15.77■□□□□ 0.11
ERBB2-207ENST00000578502 BCANQ96GW7 911 aa15.76■□□□□ 0.11
ERBB2-207ENST00000578502 CPS1P31327 1500 aa15.75■□□□□ 0.11
ERBB2-207ENST00000578502 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-207ENST00000578502 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
ERBB2-207ENST00000578502 IQSEC2Q5JU85 1478 aa15.75■□□□□ 0.11
ERBB2-207ENST00000578502 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
ERBB2-207ENST00000578502 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
ERBB2-207ENST00000578502 UBAP1LF5GYI3 381 aa15.73■□□□□ 0.11
ERBB2-207ENST00000578502 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
ERBB2-207ENST00000578502 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
ERBB2-207ENST00000578502 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
ERBB2-207ENST00000578502 KIF1BO60333 1816 aa15.71■□□□□ 0.1
ERBB2-207ENST00000578502 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
ERBB2-207ENST00000578502 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERBB2-207ENST00000578502 ADAMTS13Q76LX8 1427 aa15.69■□□□□ 0.1
ERBB2-207ENST00000578502 HDGFP51858 240 aaKnown RBP15.69■□□□□ 0.1
ERBB2-207ENST00000578502 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
ERBB2-207ENST00000578502 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
ERBB2-207ENST00000578502 KCNA6P17658 529 aa15.68■□□□□ 0.1
ERBB2-207ENST00000578502 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
ERBB2-207ENST00000578502 NRXN3Q9Y4C0 1643 aa15.67■□□□□ 0.1
ERBB2-207ENST00000578502 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
ERBB2-207ENST00000578502 CHD2O14647 1828 aaKnown RBP15.66■□□□□ 0.1
ERBB2-207ENST00000578502 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
ERBB2-207ENST00000578502 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
ERBB2-207ENST00000578502 TMEM94Q12767 1356 aa15.64■□□□□ 0.09
ERBB2-207ENST00000578502 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
ERBB2-207ENST00000578502 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
ERBB2-207ENST00000578502 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
ERBB2-207ENST00000578502 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
ERBB2-207ENST00000578502 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
ERBB2-207ENST00000578502 TOM1O60784 492 aa15.61■□□□□ 0.09
ERBB2-207ENST00000578502 PPLO60437 1756 aa15.61■□□□□ 0.09
ERBB2-207ENST00000578502 METP08581 1390 aa15.61■□□□□ 0.09
ERBB2-207ENST00000578502 SPATA31E1Q6ZUB1 1445 aa15.6■□□□□ 0.09
ERBB2-207ENST00000578502 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
ERBB2-207ENST00000578502 AMOTL2Q9Y2J4 779 aa15.59■□□□□ 0.09
ERBB2-207ENST00000578502 NKTRP30414 1462 aaKnown RBP15.59■□□□□ 0.09
ERBB2-207ENST00000578502 HRCP23327 699 aa15.57■□□□□ 0.08
ERBB2-207ENST00000578502 HSPA1LP34931 641 aa15.57■□□□□ 0.08
ERBB2-207ENST00000578502 RPGRIP1LQ68CZ1 1315 aa15.57■□□□□ 0.08
ERBB2-207ENST00000578502 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
ERBB2-207ENST00000578502 VGFO15240 615 aaPredicted RBP15.56■□□□□ 0.08
ERBB2-207ENST00000578502 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
ERBB2-207ENST00000578502 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
ERBB2-207ENST00000578502 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
ERBB2-207ENST00000578502 IFT172Q9UG01 1749 aa15.56■□□□□ 0.08
ERBB2-207ENST00000578502 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
ERBB2-207ENST00000578502 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
ERBB2-207ENST00000578502 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
ERBB2-207ENST00000578502 MSH6P52701 1360 aa15.5■□□□□ 0.07
ERBB2-207ENST00000578502 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.5■□□□□ 0.07
ERBB2-207ENST00000578502 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
ERBB2-207ENST00000578502 ROBO2Q9HCK4 1378 aa15.48■□□□□ 0.07
ERBB2-207ENST00000578502 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
ERBB2-207ENST00000578502 ROBO1Q9Y6N7 1651 aa15.48■□□□□ 0.07
ERBB2-207ENST00000578502 SLAIN2Q9P270 581 aa15.47■□□□□ 0.07
ERBB2-207ENST00000578502 PIK3C2GO75747 1445 aa15.46■□□□□ 0.07
ERBB2-207ENST00000578502 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
ERBB2-207ENST00000578502 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
ERBB2-207ENST00000578502 STK26Q9P289 416 aa15.46■□□□□ 0.07
ERBB2-207ENST00000578502 FAM135BQ49AJ0 1406 aa15.45■□□□□ 0.06
ERBB2-207ENST00000578502 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
ERBB2-207ENST00000578502 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
ERBB2-207ENST00000578502 NALCNQ8IZF0 1738 aa15.44■□□□□ 0.06
ERBB2-207ENST00000578502 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
ERBB2-207ENST00000578502 ATF3P18847 181 aa15.43■□□□□ 0.06
ERBB2-207ENST00000578502 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
ERBB2-207ENST00000578502 MYOM2P54296 1465 aa15.43■□□□□ 0.06
ERBB2-207ENST00000578502 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
ERBB2-207ENST00000578502 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
ERBB2-207ENST00000578502 PTCH1Q13635 1447 aa15.42■□□□□ 0.06
ERBB2-207ENST00000578502 WAPLQ7Z5K2 1190 aa15.41■□□□□ 0.06
ERBB2-207ENST00000578502 CADPS2Q86UW7 1296 aa15.41■□□□□ 0.06
ERBB2-207ENST00000578502 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
ERBB2-207ENST00000578502 DISP3Q9P2K9 1392 aa15.4■□□□□ 0.06
ERBB2-207ENST00000578502 PLEKHH1Q9ULM0 1364 aa15.4■□□□□ 0.06
ERBB2-207ENST00000578502 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
ERBB2-207ENST00000578502 LRPPRCP42704 1394 aaKnown RBP15.39■□□□□ 0.05
ERBB2-207ENST00000578502 SIN3AQ96ST3 1273 aa15.39■□□□□ 0.05
ERBB2-207ENST00000578502 MST1RQ04912 1400 aa15.39■□□□□ 0.05
ERBB2-207ENST00000578502 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
ERBB2-207ENST00000578502 YTHDC2Q9H6S0 1430 aaKnown RBP15.39■□□□□ 0.05
ERBB2-207ENST00000578502 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
ERBB2-207ENST00000578502 BRINP3Q76B58 766 aa15.37■□□□□ 0.05
ERBB2-207ENST00000578502 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
ERBB2-207ENST00000578502 TECPR2O15040 1411 aa15.36■□□□□ 0.05
ERBB2-207ENST00000578502 DCCP43146 1447 aa15.36■□□□□ 0.05
ERBB2-207ENST00000578502 DDX17Q92841 729 aaKnown RBP15.36■□□□□ 0.05
ERBB2-207ENST00000578502 KNDC1Q76NI1 1749 aa15.36■□□□□ 0.05
ERBB2-207ENST00000578502 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-207ENST00000578502 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
ERBB2-207ENST00000578502 LAMC1P11047 1609 aa15.35■□□□□ 0.05
ERBB2-207ENST00000578502 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
ERBB2-207ENST00000578502 COL16A1Q07092 1604 aaPredicted RBP15.33■□□□□ 0.04
ERBB2-207ENST00000578502 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
ERBB2-207ENST00000578502 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 246.7 ms