RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 FAM50AQ14320 339 aaKnown RBP6.98□□□□□ -1.29
PPP4R1-209ENST00000578329 CHD2O14647 1828 aaKnown RBP6.98□□□□□ -1.29
PPP4R1-209ENST00000578329 PTPRUQ92729 1446 aa6.98□□□□□ -1.29
PPP4R1-209ENST00000578329 TOM1O60784 492 aa6.97□□□□□ -1.29
PPP4R1-209ENST00000578329 KCNA6P17658 529 aa6.97□□□□□ -1.29
PPP4R1-209ENST00000578329 SENP3Q9H4L4 574 aaPredicted RBP6.97□□□□□ -1.29
PPP4R1-209ENST00000578329 KANK1Q14678 1352 aa6.96□□□□□ -1.29
PPP4R1-209ENST00000578329 PLEKHG1Q9ULL1 1385 aa6.96□□□□□ -1.29
PPP4R1-209ENST00000578329 FAM135BQ49AJ0 1406 aa6.96□□□□□ -1.3
PPP4R1-209ENST00000578329 RIMS2Q9UQ26 1411 aa6.96□□□□□ -1.3
PPP4R1-209ENST00000578329 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 NUTM2DQ5VT03 806 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 SLC52A1Q9NWF4 448 aa6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 NKTRP30414 1462 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 ROBO1Q9Y6N7 1651 aa6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 SCAF1Q9H7N4 1312 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-209ENST00000578329 NAIPQ13075 1403 aa6.94□□□□□ -1.3
PPP4R1-209ENST00000578329 APLP2Q06481 763 aa6.94□□□□□ -1.3
PPP4R1-209ENST00000578329 CLTCL1P53675 1640 aa6.94□□□□□ -1.3
PPP4R1-209ENST00000578329 XRN1Q8IZH2 1706 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-209ENST00000578329 EID1Q9Y6B2 187 aa6.93□□□□□ -1.3
PPP4R1-209ENST00000578329 COL16A1Q07092 1604 aaPredicted RBP6.93□□□□□ -1.3
PPP4R1-209ENST00000578329 NUP155O75694 1391 aa6.93□□□□□ -1.3
PPP4R1-209ENST00000578329 SETD1AO15047 1707 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-209ENST00000578329 NEXMIFQ5QGS0 1516 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 LRP6O75581 1613 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 POTEAQ6S8J7 498 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 TBX22Q9Y458 520 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 SPHKAPQ2M3C7 1700 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 METP08581 1390 aa6.92□□□□□ -1.3
PPP4R1-209ENST00000578329 DIP2AQ14689 1571 aa6.91□□□□□ -1.3
PPP4R1-209ENST00000578329 SETBP1Q9Y6X0 1596 aa6.91□□□□□ -1.3
PPP4R1-209ENST00000578329 ITGAEP38570 1179 aa6.91□□□□□ -1.3
PPP4R1-209ENST00000578329 PROSER2Q86WR7 435 aaPredicted RBP6.91□□□□□ -1.3
PPP4R1-209ENST00000578329 STAG3Q9UJ98 1225 aa6.9□□□□□ -1.3
PPP4R1-209ENST00000578329 TRPM2O94759 1503 aa6.9□□□□□ -1.31
PPP4R1-209ENST00000578329 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
PPP4R1-209ENST00000578329 PHLPP1O60346 1717 aa6.88□□□□□ -1.31
PPP4R1-209ENST00000578329 AHDC1Q5TGY3 1603 aaPredicted RBP6.88□□□□□ -1.31
PPP4R1-209ENST00000578329 HFM1A2PYH4 1435 aa6.88□□□□□ -1.31
PPP4R1-209ENST00000578329 NCOA3Q9Y6Q9 1424 aa6.88□□□□□ -1.31
PPP4R1-209ENST00000578329 NALCNQ8IZF0 1738 aa6.87□□□□□ -1.31
PPP4R1-209ENST00000578329 MST1RQ04912 1400 aa6.87□□□□□ -1.31
PPP4R1-209ENST00000578329 PIK3R4Q99570 1358 aa6.87□□□□□ -1.31
PPP4R1-209ENST00000578329 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
PPP4R1-209ENST00000578329 ASXL1Q8IXJ9 1541 aa6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 PRAG1Q86YV5 1406 aa6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 CHGAP10645 457 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 FOXD1Q16676 465 aa6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 BRINP3Q76B58 766 aa6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 DDX17Q92841 729 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-209ENST00000578329 SPATA31E1Q6ZUB1 1445 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 MSH6P52701 1360 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 ROBO2Q9HCK4 1378 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 C19orf44Q9H6X5 657 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 LAMC1P11047 1609 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 NHSL1Q5SYE7 1610 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 PPLO60437 1756 aa6.85□□□□□ -1.31
PPP4R1-209ENST00000578329 SHPRHQ149N8 1683 aa6.84□□□□□ -1.31
PPP4R1-209ENST00000578329 PPP1R15AO75807 674 aaPredicted RBP6.84□□□□□ -1.31
PPP4R1-209ENST00000578329 DCCP43146 1447 aa6.84□□□□□ -1.32
PPP4R1-209ENST00000578329 ADGRL3Q9HAR2 1447 aa6.84□□□□□ -1.32
PPP4R1-209ENST00000578329 JCADQ9P266 1359 aa6.83□□□□□ -1.32
PPP4R1-209ENST00000578329 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
PPP4R1-209ENST00000578329 SETD5Q9C0A6 1442 aa6.83□□□□□ -1.32
PPP4R1-209ENST00000578329 KIF1BO60333 1816 aa6.83□□□□□ -1.32
PPP4R1-209ENST00000578329 ADGRF5Q8IZF2 1346 aa6.82□□□□□ -1.32
PPP4R1-209ENST00000578329 BCANQ96GW7 911 aa6.82□□□□□ -1.32
PPP4R1-209ENST00000578329 PTCH1Q13635 1447 aa6.82□□□□□ -1.32
PPP4R1-209ENST00000578329 C1orf167Q5SNV9 1468 aa6.81□□□□□ -1.32
PPP4R1-209ENST00000578329 CADPS2Q86UW7 1296 aa6.81□□□□□ -1.32
PPP4R1-209ENST00000578329 PHF23Q9BUL5 403 aaPredicted RBP6.81□□□□□ -1.32
PPP4R1-209ENST00000578329 PNPLA6Q8IY17 1366 aa6.81□□□□□ -1.32
PPP4R1-209ENST00000578329 PLEKHH1Q9ULM0 1364 aa6.81□□□□□ -1.32
PPP4R1-209ENST00000578329 HDGFP51858 240 aaKnown RBP6.8□□□□□ -1.32
PPP4R1-209ENST00000578329 ORAI2Q96SN7 254 aa6.8□□□□□ -1.32
PPP4R1-209ENST00000578329 NRXN1Q9ULB1 1477 aa6.79□□□□□ -1.32
PPP4R1-209ENST00000578329 TECPR2O15040 1411 aa6.79□□□□□ -1.32
PPP4R1-209ENST00000578329 POTEHQ6S545 545 aa6.79□□□□□ -1.32
PPP4R1-209ENST00000578329 PXDNQ92626 1479 aa6.79□□□□□ -1.32
PPP4R1-209ENST00000578329 SOS2Q07890 1332 aaPredicted RBP6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 SPATA31A6Q5VVP1 1343 aa6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 PIK3C2GO75747 1445 aa6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 ATF3P18847 181 aa6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 ZNF326Q5BKZ1 582 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 MPHOSPH9Q99550 1183 aa6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 SLC4A1APQ9BWU0 796 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-209ENST00000578329 WAPLQ7Z5K2 1190 aa6.77□□□□□ -1.33
PPP4R1-209ENST00000578329 MYOM2P54296 1465 aa6.77□□□□□ -1.33
PPP4R1-209ENST00000578329 CDC42BPGQ6DT37 1551 aa6.77□□□□□ -1.33
PPP4R1-209ENST00000578329 RPGRIP1LQ68CZ1 1315 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 COL22A1Q8NFW1 1626 aaPredicted RBP6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 TMEM132EQ6IEE7 984 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 C14orf37Q86TY3 774 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 ADGRB1O14514 1584 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 KNDC1Q76NI1 1749 aa6.76□□□□□ -1.33
PPP4R1-209ENST00000578329 USP32Q8NFA0 1604 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms