RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 HRCP23327 699 aa34.33■■■■□ 3.09
LIMD2-204ENST00000578297 FOXD1Q16676 465 aa34.3■■■■□ 3.08
LIMD2-204ENST00000578297 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.29■■■■□ 3.08
LIMD2-204ENST00000578297 PLEKHG1Q9ULL1 1385 aa34.23■■■■□ 3.07
LIMD2-204ENST00000578297 KIF1BO60333 1816 aa34.23■■■■□ 3.07
LIMD2-204ENST00000578297 PPP1R15AO75807 674 aaPredicted RBP34.23■■■■□ 3.07
LIMD2-204ENST00000578297 FBXO41Q8TF61 875 aa34.23■■■■□ 3.07
LIMD2-204ENST00000578297 IQSEC2Q5JU85 1478 aa34.21■■■■□ 3.07
LIMD2-204ENST00000578297 CPS1P31327 1500 aa34.21■■■■□ 3.07
LIMD2-204ENST00000578297 ZNF326Q5BKZ1 582 aaKnown RBP34.2■■■■□ 3.07
LIMD2-204ENST00000578297 ILDR1Q86SU0 546 aaPredicted RBP34.2■■■■□ 3.07
LIMD2-204ENST00000578297 NUTM2DQ5VT03 806 aaPredicted RBP34.17■■■■□ 3.06
LIMD2-204ENST00000578297 BCANQ96GW7 911 aa34.17■■■■□ 3.06
LIMD2-204ENST00000578297 SLC26A8Q96RN1 970 aa34.17■■■■□ 3.06
LIMD2-204ENST00000578297 CCDC144AA2RUR9 1427 aa34.16■■■■□ 3.06
LIMD2-204ENST00000578297 STRCP1A6NGW2 1772 aa34.13■■■■□ 3.05
LIMD2-204ENST00000578297 NEXMIFQ5QGS0 1516 aa34.11■■■■□ 3.05
LIMD2-204ENST00000578297 SENP3Q9H4L4 574 aaPredicted RBP34.09■■■■□ 3.05
LIMD2-204ENST00000578297 TBX22Q9Y458 520 aa34.09■■■■□ 3.05
LIMD2-204ENST00000578297 RPGRIP1LQ68CZ1 1315 aa34.07■■■■□ 3.05
LIMD2-204ENST00000578297 ADAMTS13Q76LX8 1427 aa34.06■■■■□ 3.04
LIMD2-204ENST00000578297 KCNA6P17658 529 aa34.06■■■■□ 3.04
LIMD2-204ENST00000578297 DIP2AQ14689 1571 aa34.04■■■■□ 3.04
LIMD2-204ENST00000578297 LRRC7Q96NW7 1537 aa34.03■■■■□ 3.04
LIMD2-204ENST00000578297 SPATA31E1Q6ZUB1 1445 aa34.03■■■■□ 3.04
LIMD2-204ENST00000578297 ANKRD30BQ9BXX2 1392 aa34.02■■■■□ 3.04
LIMD2-204ENST00000578297 SETBP1Q9Y6X0 1596 aa34.02■■■■□ 3.04
LIMD2-204ENST00000578297 VGFO15240 615 aaPredicted RBP34.01■■■■□ 3.03
LIMD2-204ENST00000578297 TRIM26Q12899 539 aaPredicted RBP34.01■■■■□ 3.03
LIMD2-204ENST00000578297 NWD1Q149M9 1564 aa33.98■■■■□ 3.03
LIMD2-204ENST00000578297 NRXN3Q9Y4C0 1643 aa33.98■■■■□ 3.03
LIMD2-204ENST00000578297 PPLO60437 1756 aa33.97■■■■□ 3.03
LIMD2-204ENST00000578297 CHD2O14647 1828 aaKnown RBP33.97■■■■□ 3.03
LIMD2-204ENST00000578297 PIK3R4Q99570 1358 aa33.97■■■■□ 3.03
LIMD2-204ENST00000578297 RGL3Q3MIN7 710 aa33.96■■■■□ 3.03
LIMD2-204ENST00000578297 NKTRP30414 1462 aaKnown RBP33.93■■■■□ 3.02
LIMD2-204ENST00000578297 UBAP1LF5GYI3 381 aa33.91■■■■□ 3.02
LIMD2-204ENST00000578297 PROSER2Q86WR7 435 aaPredicted RBP33.88■■■■□ 3.01
LIMD2-204ENST00000578297 XIRP1Q702N8 1843 aaKnown RBP33.88■■■■□ 3.01
LIMD2-204ENST00000578297 IFT172Q9UG01 1749 aa33.87■■■■□ 3.01
LIMD2-204ENST00000578297 TMEM94Q12767 1356 aa33.85■■■■□ 3.01
LIMD2-204ENST00000578297 TOM1O60784 492 aa33.85■■■■□ 3.01
LIMD2-204ENST00000578297 PTPRUQ92729 1446 aa33.85■■■■□ 3.01
LIMD2-204ENST00000578297 METP08581 1390 aa33.85■■■■□ 3.01
LIMD2-204ENST00000578297 AMOTL2Q9Y2J4 779 aa33.83■■■■□ 3.01
LIMD2-204ENST00000578297 ADGRF5Q8IZF2 1346 aa33.82■■■■□ 3.01
LIMD2-204ENST00000578297 ALKQ9UM73 1620 aa33.81■■■■□ 3
LIMD2-204ENST00000578297 SETD1AO15047 1707 aaKnown RBP33.79■■■■□ 3
LIMD2-204ENST00000578297 RBM33Q96EV2 1170 aaKnown RBP33.78■■■■□ 3
LIMD2-204ENST00000578297 XRN1Q8IZH2 1706 aaKnown RBP33.76■■■■□ 3
LIMD2-204ENST00000578297 NCOA3Q9Y6Q9 1424 aa33.76■■■□□ 2.99
LIMD2-204ENST00000578297 MYOM2P54296 1465 aa33.74■■■□□ 2.99
LIMD2-204ENST00000578297 PIK3C2GO75747 1445 aa33.73■■■□□ 2.99
LIMD2-204ENST00000578297 NRXN1Q9ULB1 1477 aa33.71■■■□□ 2.99
LIMD2-204ENST00000578297 PIP4K2BP78356 416 aa33.7■■■□□ 2.99
LIMD2-204ENST00000578297 MSH6P52701 1360 aa33.69■■■□□ 2.98
LIMD2-204ENST00000578297 STAC3Q96MF2 364 aa33.66■■■□□ 2.98
LIMD2-204ENST00000578297 SCAF1Q9H7N4 1312 aaKnown RBP33.66■■■□□ 2.98
LIMD2-204ENST00000578297 DHX57Q6P158 1386 aaKnown RBP33.65■■■□□ 2.98
LIMD2-204ENST00000578297 DCAF11Q8TEB1 546 aa33.64■■■□□ 2.98
LIMD2-204ENST00000578297 PRAG1Q86YV5 1406 aa33.63■■■□□ 2.97
LIMD2-204ENST00000578297 C14orf93Q9H972 538 aaKnown RBP33.63■■■□□ 2.97
LIMD2-204ENST00000578297 C14orf37Q86TY3 774 aa33.62■■■□□ 2.97
LIMD2-204ENST00000578297 PTCH1Q13635 1447 aa33.62■■■□□ 2.97
LIMD2-204ENST00000578297 C19orf44Q9H6X5 657 aa33.61■■■□□ 2.97
LIMD2-204ENST00000578297 KDM2AQ9Y2K7 1162 aa33.6■■■□□ 2.97
LIMD2-204ENST00000578297 LAMC1P11047 1609 aa33.58■■■□□ 2.97
LIMD2-204ENST00000578297 ASXL1Q8IXJ9 1541 aa33.57■■■□□ 2.96
LIMD2-204ENST00000578297 ROBO2Q9HCK4 1378 aa33.57■■■□□ 2.96
LIMD2-204ENST00000578297 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.56■■■□□ 2.96
LIMD2-204ENST00000578297 CFAP70Q5T0N1 1121 aa33.56■■■□□ 2.96
LIMD2-204ENST00000578297 TMEM132EQ6IEE7 984 aa33.56■■■□□ 2.96
LIMD2-204ENST00000578297 LRPPRCP42704 1394 aaKnown RBP33.55■■■□□ 2.96
LIMD2-204ENST00000578297 CADPS2Q86UW7 1296 aa33.54■■■□□ 2.96
LIMD2-204ENST00000578297 FAM135BQ49AJ0 1406 aa33.53■■■□□ 2.96
LIMD2-204ENST00000578297 SLAIN2Q9P270 581 aa33.53■■■□□ 2.96
LIMD2-204ENST00000578297 TECPR2O15040 1411 aa33.53■■■□□ 2.96
LIMD2-204ENST00000578297 ABCC11Q96J66 1382 aa33.52■■■□□ 2.96
LIMD2-204ENST00000578297 ATF3P18847 181 aa33.52■■■□□ 2.96
LIMD2-204ENST00000578297 DCCP43146 1447 aa33.52■■■□□ 2.96
LIMD2-204ENST00000578297 SIN3AQ96ST3 1273 aa33.51■■■□□ 2.95
LIMD2-204ENST00000578297 ADGRL3Q9HAR2 1447 aa33.51■■■□□ 2.95
LIMD2-204ENST00000578297 HSPA1LP34931 641 aa33.5■■■□□ 2.95
LIMD2-204ENST00000578297 STK26Q9P289 416 aa33.5■■■□□ 2.95
LIMD2-204ENST00000578297 YTHDC2Q9H6S0 1430 aaKnown RBP33.5■■■□□ 2.95
LIMD2-204ENST00000578297 KNDC1Q76NI1 1749 aa33.48■■■□□ 2.95
LIMD2-204ENST00000578297 NALCNQ8IZF0 1738 aa33.46■■■□□ 2.95
LIMD2-204ENST00000578297 NEUROD1Q13562 356 aa33.44■■■□□ 2.94
LIMD2-204ENST00000578297 PCGF6Q9BYE7 350 aa33.44■■■□□ 2.94
LIMD2-204ENST00000578297 ROBO1Q9Y6N7 1651 aa33.44■■■□□ 2.94
LIMD2-204ENST00000578297 SIRT1Q96EB6 747 aa33.43■■■□□ 2.94
LIMD2-204ENST00000578297 ADGRB1O14514 1584 aa33.43■■■□□ 2.94
LIMD2-204ENST00000578297 L3MBTL2Q969R5 705 aa33.41■■■□□ 2.94
LIMD2-204ENST00000578297 WAPLQ7Z5K2 1190 aa33.4■■■□□ 2.94
LIMD2-204ENST00000578297 MST1RQ04912 1400 aa33.36■■■□□ 2.93
LIMD2-204ENST00000578297 PLEKHH1Q9ULM0 1364 aa33.35■■■□□ 2.93
LIMD2-204ENST00000578297 DLC1Q96QB1 1528 aa33.34■■■□□ 2.93
LIMD2-204ENST00000578297 KIAA1210Q9ULL0 1709 aa33.33■■■□□ 2.93
LIMD2-204ENST00000578297 BRINP3Q76B58 766 aa33.29■■■□□ 2.92
LIMD2-204ENST00000578297 TRAK1Q9UPV9 953 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms