RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 RAB3GAP2Q9H2M9 1393 aa13.68□□□□□ -0.22
CDKN2A-211ENST00000577854 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
CDKN2A-211ENST00000577854 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
CDKN2A-211ENST00000577854 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
CDKN2A-211ENST00000577854 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
CDKN2A-211ENST00000577854 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
CDKN2A-211ENST00000577854 ACIN1Q9UKV3 1341 aaKnown RBP13.65□□□□□ -0.22
CDKN2A-211ENST00000577854 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
CDKN2A-211ENST00000577854 TRPM2O94759 1503 aa13.64□□□□□ -0.23
CDKN2A-211ENST00000577854 CPS1P31327 1500 aa13.64□□□□□ -0.23
CDKN2A-211ENST00000577854 ZFYVE9O95405 1425 aa13.64□□□□□ -0.23
CDKN2A-211ENST00000577854 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
CDKN2A-211ENST00000577854 CCDC144AA2RUR9 1427 aa13.63□□□□□ -0.23
CDKN2A-211ENST00000577854 CLTCL1P53675 1640 aa13.62□□□□□ -0.23
CDKN2A-211ENST00000577854 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
CDKN2A-211ENST00000577854 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
CDKN2A-211ENST00000577854 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
CDKN2A-211ENST00000577854 IQSEC2Q5JU85 1478 aa13.61□□□□□ -0.23
CDKN2A-211ENST00000577854 PROSER2Q86WR7 435 aaPredicted RBP13.6□□□□□ -0.23
CDKN2A-211ENST00000577854 TOM1O60784 492 aa13.59□□□□□ -0.23
CDKN2A-211ENST00000577854 C14orf37Q86TY3 774 aa13.59□□□□□ -0.23
CDKN2A-211ENST00000577854 RBM33Q96EV2 1170 aaKnown RBP13.59□□□□□ -0.23
CDKN2A-211ENST00000577854 KCNA6P17658 529 aa13.58□□□□□ -0.24
CDKN2A-211ENST00000577854 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
CDKN2A-211ENST00000577854 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
CDKN2A-211ENST00000577854 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
CDKN2A-211ENST00000577854 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
CDKN2A-211ENST00000577854 KIF1BO60333 1816 aa13.55□□□□□ -0.24
CDKN2A-211ENST00000577854 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
CDKN2A-211ENST00000577854 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
CDKN2A-211ENST00000577854 NEXMIFQ5QGS0 1516 aa13.53□□□□□ -0.24
CDKN2A-211ENST00000577854 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
CDKN2A-211ENST00000577854 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.25
CDKN2A-211ENST00000577854 NKTRP30414 1462 aaKnown RBP13.52□□□□□ -0.25
CDKN2A-211ENST00000577854 DIP2AQ14689 1571 aa13.52□□□□□ -0.25
CDKN2A-211ENST00000577854 MSH6P52701 1360 aa13.51□□□□□ -0.25
CDKN2A-211ENST00000577854 HRCP23327 699 aa13.51□□□□□ -0.25
CDKN2A-211ENST00000577854 PIK3R4Q99570 1358 aa13.49□□□□□ -0.25
CDKN2A-211ENST00000577854 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
CDKN2A-211ENST00000577854 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
CDKN2A-211ENST00000577854 METP08581 1390 aa13.48□□□□□ -0.25
CDKN2A-211ENST00000577854 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
CDKN2A-211ENST00000577854 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
CDKN2A-211ENST00000577854 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
CDKN2A-211ENST00000577854 TRIM26Q12899 539 aaPredicted RBP13.47□□□□□ -0.25
CDKN2A-211ENST00000577854 ATF3P18847 181 aa13.46□□□□□ -0.25
CDKN2A-211ENST00000577854 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
CDKN2A-211ENST00000577854 PTPRUQ92729 1446 aa13.46□□□□□ -0.26
CDKN2A-211ENST00000577854 HSPA1LP34931 641 aa13.45□□□□□ -0.26
CDKN2A-211ENST00000577854 STK26Q9P289 416 aa13.45□□□□□ -0.26
CDKN2A-211ENST00000577854 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
CDKN2A-211ENST00000577854 CHD2O14647 1828 aaKnown RBP13.43□□□□□ -0.26
CDKN2A-211ENST00000577854 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
CDKN2A-211ENST00000577854 PPLO60437 1756 aa13.43□□□□□ -0.26
CDKN2A-211ENST00000577854 ALKQ9UM73 1620 aa13.42□□□□□ -0.26
CDKN2A-211ENST00000577854 TMEM132EQ6IEE7 984 aa13.42□□□□□ -0.26
CDKN2A-211ENST00000577854 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CDKN2A-211ENST00000577854 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
CDKN2A-211ENST00000577854 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
CDKN2A-211ENST00000577854 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 XRN1Q8IZH2 1706 aaKnown RBP13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
CDKN2A-211ENST00000577854 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
CDKN2A-211ENST00000577854 MYOM2P54296 1465 aa13.37□□□□□ -0.27
CDKN2A-211ENST00000577854 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
CDKN2A-211ENST00000577854 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
CDKN2A-211ENST00000577854 C14orf93Q9H972 538 aaKnown RBP13.36□□□□□ -0.27
CDKN2A-211ENST00000577854 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
CDKN2A-211ENST00000577854 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
CDKN2A-211ENST00000577854 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
CDKN2A-211ENST00000577854 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDKN2A-211ENST00000577854 WAPLQ7Z5K2 1190 aa13.35□□□□□ -0.27
CDKN2A-211ENST00000577854 ADGRL3Q9HAR2 1447 aa13.35□□□□□ -0.27
CDKN2A-211ENST00000577854 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
CDKN2A-211ENST00000577854 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
CDKN2A-211ENST00000577854 YTHDC2Q9H6S0 1430 aaKnown RBP13.34□□□□□ -0.27
CDKN2A-211ENST00000577854 SIN3AQ96ST3 1273 aa13.34□□□□□ -0.27
CDKN2A-211ENST00000577854 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.27
CDKN2A-211ENST00000577854 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.27
CDKN2A-211ENST00000577854 DCCP43146 1447 aa13.33□□□□□ -0.28
CDKN2A-211ENST00000577854 POGKQ9P215 609 aa13.33□□□□□ -0.28
CDKN2A-211ENST00000577854 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
CDKN2A-211ENST00000577854 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
CDKN2A-211ENST00000577854 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
CDKN2A-211ENST00000577854 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
CDKN2A-211ENST00000577854 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 PRAM1Q96QH2 718 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 LAMC1P11047 1609 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
CDKN2A-211ENST00000577854 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
CDKN2A-211ENST00000577854 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
CDKN2A-211ENST00000577854 MST1RQ04912 1400 aa13.3□□□□□ -0.28
CDKN2A-211ENST00000577854 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
CDKN2A-211ENST00000577854 ESCO1Q5FWF5 840 aa13.28□□□□□ -0.28
CDKN2A-211ENST00000577854 L3MBTL2Q969R5 705 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms