RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
SSH2-205ENST00000577483 KIF1BO60333 1816 aa19.23■□□□□ 0.67
SSH2-205ENST00000577483 RIMS2Q9UQ26 1411 aa19.23■□□□□ 0.67
SSH2-205ENST00000577483 TRPM2O94759 1503 aa19.21■□□□□ 0.67
SSH2-205ENST00000577483 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
SSH2-205ENST00000577483 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
SSH2-205ENST00000577483 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
SSH2-205ENST00000577483 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
SSH2-205ENST00000577483 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
SSH2-205ENST00000577483 DIP2AQ14689 1571 aa19.16■□□□□ 0.66
SSH2-205ENST00000577483 NKTRP30414 1462 aaKnown RBP19.15■□□□□ 0.66
SSH2-205ENST00000577483 TOM1O60784 492 aa19.14■□□□□ 0.66
SSH2-205ENST00000577483 ADAMTS13Q76LX8 1427 aa19.14■□□□□ 0.65
SSH2-205ENST00000577483 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
SSH2-205ENST00000577483 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
SSH2-205ENST00000577483 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
SSH2-205ENST00000577483 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
SSH2-205ENST00000577483 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
SSH2-205ENST00000577483 KCNA6P17658 529 aa19.11■□□□□ 0.65
SSH2-205ENST00000577483 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
SSH2-205ENST00000577483 BCANQ96GW7 911 aa19.11■□□□□ 0.65
SSH2-205ENST00000577483 PPLO60437 1756 aa19.1■□□□□ 0.65
SSH2-205ENST00000577483 TMEM94Q12767 1356 aa19.1■□□□□ 0.65
SSH2-205ENST00000577483 TRIM52Q96A61 297 aa19.1■□□□□ 0.65
SSH2-205ENST00000577483 HDGFP51858 240 aaKnown RBP19.09■□□□□ 0.65
SSH2-205ENST00000577483 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
SSH2-205ENST00000577483 SETD1AO15047 1707 aaKnown RBP19.08■□□□□ 0.64
SSH2-205ENST00000577483 XRN1Q8IZH2 1706 aaKnown RBP19.08■□□□□ 0.64
SSH2-205ENST00000577483 HSPA1LP34931 641 aa19.07■□□□□ 0.64
SSH2-205ENST00000577483 RBM33Q96EV2 1170 aaKnown RBP19.07■□□□□ 0.64
SSH2-205ENST00000577483 ROBO1Q9Y6N7 1651 aa19.06■□□□□ 0.64
SSH2-205ENST00000577483 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
SSH2-205ENST00000577483 SLC4A1APQ9BWU0 796 aaKnown RBP19.05■□□□□ 0.64
SSH2-205ENST00000577483 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
SSH2-205ENST00000577483 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
SSH2-205ENST00000577483 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
SSH2-205ENST00000577483 PROSER2Q86WR7 435 aaPredicted RBP19.03■□□□□ 0.64
SSH2-205ENST00000577483 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
SSH2-205ENST00000577483 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
SSH2-205ENST00000577483 PIK3R4Q99570 1358 aa19.02■□□□□ 0.64
SSH2-205ENST00000577483 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.63
SSH2-205ENST00000577483 FOXD1Q16676 465 aa19.01■□□□□ 0.63
SSH2-205ENST00000577483 SETD5Q9C0A6 1442 aa18.99■□□□□ 0.63
SSH2-205ENST00000577483 NALCNQ8IZF0 1738 aa18.97■□□□□ 0.63
SSH2-205ENST00000577483 MSH6P52701 1360 aa18.97■□□□□ 0.63
SSH2-205ENST00000577483 METP08581 1390 aa18.96■□□□□ 0.63
SSH2-205ENST00000577483 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
SSH2-205ENST00000577483 FAM135BQ49AJ0 1406 aa18.95■□□□□ 0.62
SSH2-205ENST00000577483 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
SSH2-205ENST00000577483 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
SSH2-205ENST00000577483 NCOA3Q9Y6Q9 1424 aa18.94■□□□□ 0.62
SSH2-205ENST00000577483 RAB3GAP2Q9H2M9 1393 aa18.94■□□□□ 0.62
SSH2-205ENST00000577483 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
SSH2-205ENST00000577483 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
SSH2-205ENST00000577483 ILDR2Q71H61 639 aa18.91■□□□□ 0.62
SSH2-205ENST00000577483 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
SSH2-205ENST00000577483 COL16A1Q07092 1604 aaPredicted RBP18.89■□□□□ 0.61
SSH2-205ENST00000577483 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
SSH2-205ENST00000577483 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
SSH2-205ENST00000577483 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
SSH2-205ENST00000577483 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
SSH2-205ENST00000577483 DCCP43146 1447 aa18.85■□□□□ 0.61
SSH2-205ENST00000577483 KNDC1Q76NI1 1749 aa18.85■□□□□ 0.61
SSH2-205ENST00000577483 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
SSH2-205ENST00000577483 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
SSH2-205ENST00000577483 AHDC1Q5TGY3 1603 aaPredicted RBP18.84■□□□□ 0.61
SSH2-205ENST00000577483 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
SSH2-205ENST00000577483 NHSL1Q5SYE7 1610 aa18.84■□□□□ 0.61
SSH2-205ENST00000577483 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
SSH2-205ENST00000577483 PRAG1Q86YV5 1406 aa18.84■□□□□ 0.61
SSH2-205ENST00000577483 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.6
SSH2-205ENST00000577483 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
SSH2-205ENST00000577483 ADGRF5Q8IZF2 1346 aa18.82■□□□□ 0.6
SSH2-205ENST00000577483 CADPS2Q86UW7 1296 aa18.82■□□□□ 0.6
SSH2-205ENST00000577483 PIK3C2GO75747 1445 aa18.81■□□□□ 0.6
SSH2-205ENST00000577483 MST1RQ04912 1400 aa18.81■□□□□ 0.6
SSH2-205ENST00000577483 SHPRHQ149N8 1683 aa18.8■□□□□ 0.6
SSH2-205ENST00000577483 LAMC1P11047 1609 aa18.8■□□□□ 0.6
SSH2-205ENST00000577483 ANKRD30BQ9BXX2 1392 aa18.8■□□□□ 0.6
SSH2-205ENST00000577483 ROBO2Q9HCK4 1378 aa18.8■□□□□ 0.6
SSH2-205ENST00000577483 ATF3P18847 181 aa18.8■□□□□ 0.6
SSH2-205ENST00000577483 MYOM2P54296 1465 aa18.77■□□□□ 0.6
SSH2-205ENST00000577483 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.6
SSH2-205ENST00000577483 BRINP3Q76B58 766 aa18.74■□□□□ 0.59
SSH2-205ENST00000577483 CDC42BPGQ6DT37 1551 aa18.74■□□□□ 0.59
SSH2-205ENST00000577483 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SSH2-205ENST00000577483 HRCP23327 699 aa18.71■□□□□ 0.59
SSH2-205ENST00000577483 JCADQ9P266 1359 aa18.71■□□□□ 0.59
SSH2-205ENST00000577483 RGPD8O14715 1765 aaPredicted RBP18.71■□□□□ 0.59
SSH2-205ENST00000577483 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.58
SSH2-205ENST00000577483 FMN2Q9NZ56 1722 aa18.7■□□□□ 0.58
SSH2-205ENST00000577483 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SSH2-205ENST00000577483 LRP6O75581 1613 aa18.7■□□□□ 0.58
SSH2-205ENST00000577483 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
SSH2-205ENST00000577483 SOCS7O14512 581 aa18.68■□□□□ 0.58
SSH2-205ENST00000577483 TMEM132EQ6IEE7 984 aa18.68■□□□□ 0.58
SSH2-205ENST00000577483 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
SSH2-205ENST00000577483 ABCC11Q96J66 1382 aa18.66■□□□□ 0.58
SSH2-205ENST00000577483 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
SSH2-205ENST00000577483 ADGRB1O14514 1584 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms