RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 PPP1R15AO75807 674 aaPredicted RBP39.39■■■■□ 3.9
PPP4R1-204ENST00000577393 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.38■■■■□ 3.89
PPP4R1-204ENST00000577393 STRCP1A6NGW2 1772 aa39.37■■■■□ 3.89
PPP4R1-204ENST00000577393 BCANQ96GW7 911 aa39.37■■■■□ 3.89
PPP4R1-204ENST00000577393 SLC26A8Q96RN1 970 aa39.37■■■■□ 3.89
PPP4R1-204ENST00000577393 PLEKHG1Q9ULL1 1385 aa39.35■■■■□ 3.89
PPP4R1-204ENST00000577393 NUTM2DQ5VT03 806 aaPredicted RBP39.35■■■■□ 3.89
PPP4R1-204ENST00000577393 SENP3Q9H4L4 574 aaPredicted RBP39.35■■■■□ 3.89
PPP4R1-204ENST00000577393 CLTCL1P53675 1640 aa39.35■■■■□ 3.89
PPP4R1-204ENST00000577393 MPHOSPH9Q99550 1183 aa39.34■■■■□ 3.89
PPP4R1-204ENST00000577393 FOXD1Q16676 465 aa39.32■■■■□ 3.89
PPP4R1-204ENST00000577393 ACIN1Q9UKV3 1341 aaKnown RBP39.32■■■■□ 3.88
PPP4R1-204ENST00000577393 RAB3GAP2Q9H2M9 1393 aa39.29■■■■□ 3.88
PPP4R1-204ENST00000577393 UBAP1LF5GYI3 381 aa39.28■■■■□ 3.88
PPP4R1-204ENST00000577393 ZNF326Q5BKZ1 582 aaKnown RBP39.28■■■■□ 3.88
PPP4R1-204ENST00000577393 LRRC7Q96NW7 1537 aa39.26■■■■□ 3.88
PPP4R1-204ENST00000577393 KCNA6P17658 529 aa39.23■■■■□ 3.87
PPP4R1-204ENST00000577393 KIF1BO60333 1816 aa39.21■■■■□ 3.87
PPP4R1-204ENST00000577393 TBX22Q9Y458 520 aa39.19■■■■□ 3.86
PPP4R1-204ENST00000577393 ADAMTS13Q76LX8 1427 aa39.16■■■■□ 3.86
PPP4R1-204ENST00000577393 TOM1O60784 492 aa39.13■■■■□ 3.85
PPP4R1-204ENST00000577393 NEXMIFQ5QGS0 1516 aa39.12■■■■□ 3.85
PPP4R1-204ENST00000577393 CCDC144AA2RUR9 1427 aa39.1■■■■□ 3.85
PPP4R1-204ENST00000577393 NWD1Q149M9 1564 aa39.09■■■■□ 3.85
PPP4R1-204ENST00000577393 DIP2AQ14689 1571 aa39.08■■■■□ 3.85
PPP4R1-204ENST00000577393 HRCP23327 699 aa39.08■■■■□ 3.85
PPP4R1-204ENST00000577393 PROSER2Q86WR7 435 aaPredicted RBP39.08■■■■□ 3.85
PPP4R1-204ENST00000577393 CHD2O14647 1828 aaKnown RBP39.06■■■■□ 3.84
PPP4R1-204ENST00000577393 TMEM94Q12767 1356 aa39.06■■■■□ 3.84
PPP4R1-204ENST00000577393 XIRP1Q702N8 1843 aaKnown RBP39.05■■■■□ 3.84
PPP4R1-204ENST00000577393 NKTRP30414 1462 aaKnown RBP39.05■■■■□ 3.84
PPP4R1-204ENST00000577393 PIP4K2BP78356 416 aa39.04■■■■□ 3.84
PPP4R1-204ENST00000577393 RPGRIP1LQ68CZ1 1315 aa39.04■■■■□ 3.84
PPP4R1-204ENST00000577393 SETBP1Q9Y6X0 1596 aa39.04■■■■□ 3.84
PPP4R1-204ENST00000577393 PIK3R4Q99570 1358 aa39.03■■■■□ 3.84
PPP4R1-204ENST00000577393 NRXN3Q9Y4C0 1643 aa39.03■■■■□ 3.84
PPP4R1-204ENST00000577393 RBM33Q96EV2 1170 aaKnown RBP39.02■■■■□ 3.84
PPP4R1-204ENST00000577393 SCAF1Q9H7N4 1312 aaKnown RBP39.02■■■■□ 3.84
PPP4R1-204ENST00000577393 ALKQ9UM73 1620 aa39.01■■■■□ 3.84
PPP4R1-204ENST00000577393 VGFO15240 615 aaPredicted RBP39■■■■□ 3.83
PPP4R1-204ENST00000577393 RGL3Q3MIN7 710 aa38.96■■■■□ 3.83
PPP4R1-204ENST00000577393 SPATA31E1Q6ZUB1 1445 aa38.96■■■■□ 3.83
PPP4R1-204ENST00000577393 PTPRUQ92729 1446 aa38.94■■■■□ 3.82
PPP4R1-204ENST00000577393 AMOTL2Q9Y2J4 779 aa38.93■■■■□ 3.82
PPP4R1-204ENST00000577393 PPLO60437 1756 aa38.92■■■■□ 3.82
PPP4R1-204ENST00000577393 METP08581 1390 aa38.91■■■■□ 3.82
PPP4R1-204ENST00000577393 ANKRD30BQ9BXX2 1392 aa38.85■■■■□ 3.81
PPP4R1-204ENST00000577393 MSH6P52701 1360 aa38.83■■■■□ 3.81
PPP4R1-204ENST00000577393 NCOA3Q9Y6Q9 1424 aa38.82■■■■□ 3.81
PPP4R1-204ENST00000577393 HSPA1LP34931 641 aa38.82■■■■□ 3.8
PPP4R1-204ENST00000577393 ADGRF5Q8IZF2 1346 aa38.82■■■■□ 3.8
PPP4R1-204ENST00000577393 XRN1Q8IZH2 1706 aaKnown RBP38.8■■■■□ 3.8
PPP4R1-204ENST00000577393 C14orf37Q86TY3 774 aa38.78■■■■□ 3.8
PPP4R1-204ENST00000577393 IFT172Q9UG01 1749 aa38.77■■■■□ 3.8
PPP4R1-204ENST00000577393 SETD1AO15047 1707 aaKnown RBP38.75■■■■□ 3.79
PPP4R1-204ENST00000577393 C19orf44Q9H6X5 657 aa38.7■■■■□ 3.79
PPP4R1-204ENST00000577393 FAM135BQ49AJ0 1406 aa38.69■■■■□ 3.78
PPP4R1-204ENST00000577393 SLAIN2Q9P270 581 aa38.67■■■■□ 3.78
PPP4R1-204ENST00000577393 PIK3C2GO75747 1445 aa38.64■■■■□ 3.78
PPP4R1-204ENST00000577393 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.64■■■■□ 3.78
PPP4R1-204ENST00000577393 ATF3P18847 181 aa38.62■■■■□ 3.77
PPP4R1-204ENST00000577393 CADPS2Q86UW7 1296 aa38.62■■■■□ 3.77
PPP4R1-204ENST00000577393 MYOM2P54296 1465 aa38.6■■■■□ 3.77
PPP4R1-204ENST00000577393 ROBO2Q9HCK4 1378 aa38.59■■■■□ 3.77
PPP4R1-204ENST00000577393 PTCH1Q13635 1447 aa38.59■■■■□ 3.77
PPP4R1-204ENST00000577393 ROBO1Q9Y6N7 1651 aa38.58■■■■□ 3.77
PPP4R1-204ENST00000577393 NRXN1Q9ULB1 1477 aa38.58■■■■□ 3.77
PPP4R1-204ENST00000577393 PRAG1Q86YV5 1406 aa38.57■■■■□ 3.77
PPP4R1-204ENST00000577393 TMEM132EQ6IEE7 984 aa38.55■■■■□ 3.76
PPP4R1-204ENST00000577393 C14orf93Q9H972 538 aaKnown RBP38.55■■■■□ 3.76
PPP4R1-204ENST00000577393 DCCP43146 1447 aa38.54■■■■□ 3.76
PPP4R1-204ENST00000577393 TRIM26Q12899 539 aaPredicted RBP38.53■■■■□ 3.76
PPP4R1-204ENST00000577393 ADGRL3Q9HAR2 1447 aa38.53■■■■□ 3.76
PPP4R1-204ENST00000577393 STK26Q9P289 416 aa38.52■■■■□ 3.76
PPP4R1-204ENST00000577393 CFAP70Q5T0N1 1121 aa38.51■■■■□ 3.76
PPP4R1-204ENST00000577393 DCAF11Q8TEB1 546 aa38.51■■■■□ 3.76
PPP4R1-204ENST00000577393 KDM2AQ9Y2K7 1162 aa38.51■■■■□ 3.76
PPP4R1-204ENST00000577393 ASXL1Q8IXJ9 1541 aa38.51■■■■□ 3.76
PPP4R1-204ENST00000577393 LRPPRCP42704 1394 aaKnown RBP38.5■■■■□ 3.75
PPP4R1-204ENST00000577393 NALCNQ8IZF0 1738 aa38.47■■■■□ 3.75
PPP4R1-204ENST00000577393 DHX57Q6P158 1386 aaKnown RBP38.46■■■■□ 3.75
PPP4R1-204ENST00000577393 ABCC11Q96J66 1382 aa38.45■■■■□ 3.75
PPP4R1-204ENST00000577393 TECPR2O15040 1411 aa38.45■■■■□ 3.75
PPP4R1-204ENST00000577393 DISP3Q9P2K9 1392 aa38.44■■■■□ 3.74
PPP4R1-204ENST00000577393 STAC3Q96MF2 364 aa38.44■■■■□ 3.74
PPP4R1-204ENST00000577393 YTHDC2Q9H6S0 1430 aaKnown RBP38.43■■■■□ 3.74
PPP4R1-204ENST00000577393 MST1RQ04912 1400 aa38.42■■■■□ 3.74
PPP4R1-204ENST00000577393 LAMC1P11047 1609 aa38.41■■■■□ 3.74
PPP4R1-204ENST00000577393 WAPLQ7Z5K2 1190 aa38.4■■■■□ 3.74
PPP4R1-204ENST00000577393 BRINP3Q76B58 766 aa38.38■■■■□ 3.73
PPP4R1-204ENST00000577393 KNDC1Q76NI1 1749 aa38.37■■■■□ 3.73
PPP4R1-204ENST00000577393 PHLPP1O60346 1717 aa38.35■■■■□ 3.73
PPP4R1-204ENST00000577393 PLEKHH1Q9ULM0 1364 aa38.33■■■■□ 3.73
PPP4R1-204ENST00000577393 SIRT1Q96EB6 747 aa38.32■■■■□ 3.72
PPP4R1-204ENST00000577393 MED1Q15648 1581 aaPredicted RBP38.31■■■■□ 3.72
PPP4R1-204ENST00000577393 SIN3AQ96ST3 1273 aa38.29■■■■□ 3.72
PPP4R1-204ENST00000577393 C1orf167Q5SNV9 1468 aa38.28■■■■□ 3.72
PPP4R1-204ENST00000577393 ADGRB1O14514 1584 aa38.28■■■■□ 3.72
PPP4R1-204ENST00000577393 AHDC1Q5TGY3 1603 aaPredicted RBP38.27■■■■□ 3.72
PPP4R1-204ENST00000577393 COL16A1Q07092 1604 aaPredicted RBP38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms