RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
POLR2A-208ENST00000576952 FOXD1Q16676 465 aa22.8■■□□□ 1.24
POLR2A-208ENST00000576952 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
POLR2A-208ENST00000576952 CPS1P31327 1500 aa22.78■■□□□ 1.24
POLR2A-208ENST00000576952 IQSEC2Q5JU85 1478 aa22.78■■□□□ 1.24
POLR2A-208ENST00000576952 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
POLR2A-208ENST00000576952 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.24
POLR2A-208ENST00000576952 XIRP1Q702N8 1843 aaKnown RBP22.76■■□□□ 1.23
POLR2A-208ENST00000576952 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
POLR2A-208ENST00000576952 CHD2O14647 1828 aaKnown RBP22.74■■□□□ 1.23
POLR2A-208ENST00000576952 SLC26A8Q96RN1 970 aa22.74■■□□□ 1.23
POLR2A-208ENST00000576952 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
POLR2A-208ENST00000576952 BCANQ96GW7 911 aa22.73■■□□□ 1.23
POLR2A-208ENST00000576952 PLEKHG1Q9ULL1 1385 aa22.73■■□□□ 1.23
POLR2A-208ENST00000576952 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
POLR2A-208ENST00000576952 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
POLR2A-208ENST00000576952 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
POLR2A-208ENST00000576952 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
POLR2A-208ENST00000576952 PPLO60437 1756 aa22.71■■□□□ 1.23
POLR2A-208ENST00000576952 NRXN3Q9Y4C0 1643 aa22.69■■□□□ 1.22
POLR2A-208ENST00000576952 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
POLR2A-208ENST00000576952 NWD1Q149M9 1564 aa22.67■■□□□ 1.22
POLR2A-208ENST00000576952 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
POLR2A-208ENST00000576952 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
POLR2A-208ENST00000576952 DIP2AQ14689 1571 aa22.65■■□□□ 1.22
POLR2A-208ENST00000576952 IFT172Q9UG01 1749 aa22.65■■□□□ 1.22
POLR2A-208ENST00000576952 SETBP1Q9Y6X0 1596 aa22.63■■□□□ 1.21
POLR2A-208ENST00000576952 HRCP23327 699 aa22.62■■□□□ 1.21
POLR2A-208ENST00000576952 UBAP1LF5GYI3 381 aa22.61■■□□□ 1.21
POLR2A-208ENST00000576952 KCNA6P17658 529 aa22.61■■□□□ 1.21
POLR2A-208ENST00000576952 TBX22Q9Y458 520 aa22.61■■□□□ 1.21
POLR2A-208ENST00000576952 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
POLR2A-208ENST00000576952 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
POLR2A-208ENST00000576952 ALKQ9UM73 1620 aa22.58■■□□□ 1.21
POLR2A-208ENST00000576952 NKTRP30414 1462 aaKnown RBP22.58■■□□□ 1.2
POLR2A-208ENST00000576952 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
POLR2A-208ENST00000576952 RPGRIP1LQ68CZ1 1315 aa22.55■■□□□ 1.2
POLR2A-208ENST00000576952 PROSER2Q86WR7 435 aaPredicted RBP22.54■■□□□ 1.2
POLR2A-208ENST00000576952 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
POLR2A-208ENST00000576952 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
POLR2A-208ENST00000576952 TMEM94Q12767 1356 aa22.53■■□□□ 1.2
POLR2A-208ENST00000576952 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
POLR2A-208ENST00000576952 PIK3R4Q99570 1358 aa22.52■■□□□ 1.2
POLR2A-208ENST00000576952 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
POLR2A-208ENST00000576952 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
POLR2A-208ENST00000576952 TOM1O60784 492 aa22.51■■□□□ 1.19
POLR2A-208ENST00000576952 PIP4K2BP78356 416 aa22.5■■□□□ 1.19
POLR2A-208ENST00000576952 METP08581 1390 aa22.5■■□□□ 1.19
POLR2A-208ENST00000576952 SCAF1Q9H7N4 1312 aaKnown RBP22.49■■□□□ 1.19
POLR2A-208ENST00000576952 AMOTL2Q9Y2J4 779 aa22.48■■□□□ 1.19
POLR2A-208ENST00000576952 ADGRF5Q8IZF2 1346 aa22.46■■□□□ 1.19
POLR2A-208ENST00000576952 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.19
POLR2A-208ENST00000576952 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
POLR2A-208ENST00000576952 MSH6P52701 1360 aa22.4■■□□□ 1.18
POLR2A-208ENST00000576952 NALCNQ8IZF0 1738 aa22.4■■□□□ 1.18
POLR2A-208ENST00000576952 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
POLR2A-208ENST00000576952 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
POLR2A-208ENST00000576952 MYOM2P54296 1465 aa22.38■■□□□ 1.17
POLR2A-208ENST00000576952 ROBO1Q9Y6N7 1651 aa22.38■■□□□ 1.17
POLR2A-208ENST00000576952 NCOA3Q9Y6Q9 1424 aa22.38■■□□□ 1.17
POLR2A-208ENST00000576952 ASXL1Q8IXJ9 1541 aa22.37■■□□□ 1.17
POLR2A-208ENST00000576952 LAMC1P11047 1609 aa22.37■■□□□ 1.17
POLR2A-208ENST00000576952 NRXN1Q9ULB1 1477 aa22.36■■□□□ 1.17
POLR2A-208ENST00000576952 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
POLR2A-208ENST00000576952 HSPA1LP34931 641 aa22.35■■□□□ 1.17
POLR2A-208ENST00000576952 C19orf44Q9H6X5 657 aa22.32■■□□□ 1.16
POLR2A-208ENST00000576952 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
POLR2A-208ENST00000576952 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
POLR2A-208ENST00000576952 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
POLR2A-208ENST00000576952 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
POLR2A-208ENST00000576952 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
POLR2A-208ENST00000576952 DCAF11Q8TEB1 546 aa22.3■■□□□ 1.16
POLR2A-208ENST00000576952 KDM2AQ9Y2K7 1162 aa22.3■■□□□ 1.16
POLR2A-208ENST00000576952 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
POLR2A-208ENST00000576952 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
POLR2A-208ENST00000576952 CFAP70Q5T0N1 1121 aa22.28■■□□□ 1.16
POLR2A-208ENST00000576952 C14orf93Q9H972 538 aaKnown RBP22.28■■□□□ 1.16
POLR2A-208ENST00000576952 ADGRL3Q9HAR2 1447 aa22.28■■□□□ 1.16
POLR2A-208ENST00000576952 ATF3P18847 181 aa22.27■■□□□ 1.16
POLR2A-208ENST00000576952 STK26Q9P289 416 aa22.27■■□□□ 1.16
POLR2A-208ENST00000576952 PHLPP1O60346 1717 aa22.26■■□□□ 1.15
POLR2A-208ENST00000576952 DCCP43146 1447 aa22.26■■□□□ 1.15
POLR2A-208ENST00000576952 CADPS2Q86UW7 1296 aa22.26■■□□□ 1.15
POLR2A-208ENST00000576952 LRPPRCP42704 1394 aaKnown RBP22.25■■□□□ 1.15
POLR2A-208ENST00000576952 YTHDC2Q9H6S0 1430 aaKnown RBP22.25■■□□□ 1.15
POLR2A-208ENST00000576952 TECPR2O15040 1411 aa22.24■■□□□ 1.15
POLR2A-208ENST00000576952 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
POLR2A-208ENST00000576952 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
POLR2A-208ENST00000576952 ADGRB1O14514 1584 aa22.21■■□□□ 1.15
POLR2A-208ENST00000576952 MST1RQ04912 1400 aa22.21■■□□□ 1.15
POLR2A-208ENST00000576952 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
POLR2A-208ENST00000576952 WAPLQ7Z5K2 1190 aa22.2■■□□□ 1.14
POLR2A-208ENST00000576952 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
POLR2A-208ENST00000576952 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
POLR2A-208ENST00000576952 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
POLR2A-208ENST00000576952 NEUROD1Q13562 356 aa22.17■■□□□ 1.14
POLR2A-208ENST00000576952 COL16A1Q07092 1604 aaPredicted RBP22.17■■□□□ 1.14
POLR2A-208ENST00000576952 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
POLR2A-208ENST00000576952 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
POLR2A-208ENST00000576952 ARHGEF28Q8N1W1 1705 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms