RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TRPM2O94759 1503 aa34.91■■■■□ 3.18
SNF8-217ENST00000576353 RAB3GAP2Q9H2M9 1393 aa34.91■■■■□ 3.18
SNF8-217ENST00000576353 IQSEC2Q5JU85 1478 aa34.9■■■■□ 3.18
SNF8-217ENST00000576353 BCANQ96GW7 911 aa34.89■■■■□ 3.18
SNF8-217ENST00000576353 CPS1P31327 1500 aa34.87■■■■□ 3.17
SNF8-217ENST00000576353 PLEKHG1Q9ULL1 1385 aa34.85■■■■□ 3.17
SNF8-217ENST00000576353 MYO5BQ9ULV0 1848 aa34.84■■■■□ 3.17
SNF8-217ENST00000576353 FOXD1Q16676 465 aa34.84■■■■□ 3.17
SNF8-217ENST00000576353 ZNF326Q5BKZ1 582 aaKnown RBP34.84■■■■□ 3.17
SNF8-217ENST00000576353 HRCP23327 699 aa34.83■■■■□ 3.17
SNF8-217ENST00000576353 SLC26A8Q96RN1 970 aa34.83■■■■□ 3.17
SNF8-217ENST00000576353 NUTM2DQ5VT03 806 aaPredicted RBP34.81■■■■□ 3.16
SNF8-217ENST00000576353 CLTCL1P53675 1640 aa34.81■■■■□ 3.16
SNF8-217ENST00000576353 SENP3Q9H4L4 574 aaPredicted RBP34.76■■■■□ 3.16
SNF8-217ENST00000576353 TBX22Q9Y458 520 aa34.74■■■■□ 3.15
SNF8-217ENST00000576353 KCNA6P17658 529 aa34.73■■■■□ 3.15
SNF8-217ENST00000576353 CCDC144AA2RUR9 1427 aa34.72■■■■□ 3.15
SNF8-217ENST00000576353 UBAP1LF5GYI3 381 aa34.69■■■■□ 3.14
SNF8-217ENST00000576353 KIF1BO60333 1816 aa34.68■■■■□ 3.14
SNF8-217ENST00000576353 RPGRIP1LQ68CZ1 1315 aa34.68■■■■□ 3.14
SNF8-217ENST00000576353 LRRC7Q96NW7 1537 aa34.67■■■■□ 3.14
SNF8-217ENST00000576353 STRCP1A6NGW2 1772 aa34.65■■■■□ 3.14
SNF8-217ENST00000576353 ADAMTS13Q76LX8 1427 aa34.64■■■■□ 3.14
SNF8-217ENST00000576353 VGFO15240 615 aaPredicted RBP34.64■■■■□ 3.14
SNF8-217ENST00000576353 TOM1O60784 492 aa34.62■■■■□ 3.13
SNF8-217ENST00000576353 NEXMIFQ5QGS0 1516 aa34.61■■■■□ 3.13
SNF8-217ENST00000576353 DIP2AQ14689 1571 aa34.6■■■■□ 3.13
SNF8-217ENST00000576353 PIK3R4Q99570 1358 aa34.6■■■■□ 3.13
SNF8-217ENST00000576353 PROSER2Q86WR7 435 aaPredicted RBP34.59■■■■□ 3.13
SNF8-217ENST00000576353 RGL3Q3MIN7 710 aa34.56■■■■□ 3.12
SNF8-217ENST00000576353 NKTRP30414 1462 aaKnown RBP34.55■■■■□ 3.12
SNF8-217ENST00000576353 SPATA31E1Q6ZUB1 1445 aa34.55■■■■□ 3.12
SNF8-217ENST00000576353 NWD1Q149M9 1564 aa34.54■■■■□ 3.12
SNF8-217ENST00000576353 SETBP1Q9Y6X0 1596 aa34.54■■■■□ 3.12
SNF8-217ENST00000576353 TMEM94Q12767 1356 aa34.53■■■■□ 3.12
SNF8-217ENST00000576353 ANKRD30BQ9BXX2 1392 aa34.5■■■■□ 3.11
SNF8-217ENST00000576353 AMOTL2Q9Y2J4 779 aa34.48■■■■□ 3.11
SNF8-217ENST00000576353 CHD2O14647 1828 aaKnown RBP34.48■■■■□ 3.11
SNF8-217ENST00000576353 NRXN3Q9Y4C0 1643 aa34.47■■■■□ 3.11
SNF8-217ENST00000576353 PIP4K2BP78356 416 aa34.46■■■■□ 3.11
SNF8-217ENST00000576353 RBM33Q96EV2 1170 aaKnown RBP34.45■■■■□ 3.11
SNF8-217ENST00000576353 SCAF1Q9H7N4 1312 aaKnown RBP34.45■■■■□ 3.11
SNF8-217ENST00000576353 METP08581 1390 aa34.44■■■■□ 3.1
SNF8-217ENST00000576353 TRIM26Q12899 539 aaPredicted RBP34.42■■■■□ 3.1
SNF8-217ENST00000576353 PTPRUQ92729 1446 aa34.41■■■■□ 3.1
SNF8-217ENST00000576353 PPLO60437 1756 aa34.41■■■■□ 3.1
SNF8-217ENST00000576353 ADGRF5Q8IZF2 1346 aa34.4■■■■□ 3.1
SNF8-217ENST00000576353 NCOA3Q9Y6Q9 1424 aa34.39■■■■□ 3.1
SNF8-217ENST00000576353 MSH6P52701 1360 aa34.37■■■■□ 3.09
SNF8-217ENST00000576353 XIRP1Q702N8 1843 aaKnown RBP34.37■■■■□ 3.09
SNF8-217ENST00000576353 C14orf37Q86TY3 774 aa34.35■■■■□ 3.09
SNF8-217ENST00000576353 ALKQ9UM73 1620 aa34.34■■■■□ 3.09
SNF8-217ENST00000576353 C19orf44Q9H6X5 657 aa34.29■■■■□ 3.08
SNF8-217ENST00000576353 XRN1Q8IZH2 1706 aaKnown RBP34.28■■■■□ 3.08
SNF8-217ENST00000576353 IFT172Q9UG01 1749 aa34.27■■■■□ 3.08
SNF8-217ENST00000576353 PIK3C2GO75747 1445 aa34.26■■■■□ 3.07
SNF8-217ENST00000576353 HSPA1LP34931 641 aa34.24■■■■□ 3.07
SNF8-217ENST00000576353 STAC3Q96MF2 364 aa34.24■■■■□ 3.07
SNF8-217ENST00000576353 MYOM2P54296 1465 aa34.24■■■■□ 3.07
SNF8-217ENST00000576353 SLAIN2Q9P270 581 aa34.23■■■■□ 3.07
SNF8-217ENST00000576353 ATF3P18847 181 aa34.22■■■■□ 3.07
SNF8-217ENST00000576353 CADPS2Q86UW7 1296 aa34.22■■■■□ 3.07
SNF8-217ENST00000576353 SETD1AO15047 1707 aaKnown RBP34.21■■■■□ 3.07
SNF8-217ENST00000576353 C14orf93Q9H972 538 aaKnown RBP34.21■■■■□ 3.07
SNF8-217ENST00000576353 FAM135BQ49AJ0 1406 aa34.21■■■■□ 3.07
SNF8-217ENST00000576353 NRXN1Q9ULB1 1477 aa34.2■■■■□ 3.07
SNF8-217ENST00000576353 DCAF11Q8TEB1 546 aa34.2■■■■□ 3.07
SNF8-217ENST00000576353 PTCH1Q13635 1447 aa34.19■■■■□ 3.06
SNF8-217ENST00000576353 KDM2AQ9Y2K7 1162 aa34.18■■■■□ 3.06
SNF8-217ENST00000576353 PRAG1Q86YV5 1406 aa34.18■■■■□ 3.06
SNF8-217ENST00000576353 ROBO2Q9HCK4 1378 aa34.16■■■■□ 3.06
SNF8-217ENST00000576353 TMEM132EQ6IEE7 984 aa34.15■■■■□ 3.06
SNF8-217ENST00000576353 CFAP70Q5T0N1 1121 aa34.14■■■■□ 3.06
SNF8-217ENST00000576353 STK26Q9P289 416 aa34.14■■■■□ 3.06
SNF8-217ENST00000576353 DCCP43146 1447 aa34.13■■■■□ 3.05
SNF8-217ENST00000576353 LRPPRCP42704 1394 aaKnown RBP34.13■■■■□ 3.05
SNF8-217ENST00000576353 DHX57Q6P158 1386 aaKnown RBP34.12■■■■□ 3.05
SNF8-217ENST00000576353 ADGRL3Q9HAR2 1447 aa34.11■■■■□ 3.05
SNF8-217ENST00000576353 ABCC11Q96J66 1382 aa34.11■■■■□ 3.05
SNF8-217ENST00000576353 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.1■■■■□ 3.05
SNF8-217ENST00000576353 TECPR2O15040 1411 aa34.07■■■■□ 3.04
SNF8-217ENST00000576353 YTHDC2Q9H6S0 1430 aaKnown RBP34.06■■■■□ 3.04
SNF8-217ENST00000576353 ASXL1Q8IXJ9 1541 aa34.05■■■■□ 3.04
SNF8-217ENST00000576353 LAMC1P11047 1609 aa34.05■■■■□ 3.04
SNF8-217ENST00000576353 SIRT1Q96EB6 747 aa34.03■■■■□ 3.04
SNF8-217ENST00000576353 ROBO1Q9Y6N7 1651 aa34.03■■■■□ 3.04
SNF8-217ENST00000576353 WAPLQ7Z5K2 1190 aa34■■■■□ 3.03
SNF8-217ENST00000576353 SIN3AQ96ST3 1273 aa34■■■■□ 3.03
SNF8-217ENST00000576353 MST1RQ04912 1400 aa33.96■■■■□ 3.03
SNF8-217ENST00000576353 NEUROD1Q13562 356 aa33.96■■■■□ 3.03
SNF8-217ENST00000576353 NALCNQ8IZF0 1738 aa33.96■■■■□ 3.03
SNF8-217ENST00000576353 BRINP3Q76B58 766 aa33.94■■■■□ 3.02
SNF8-217ENST00000576353 KNDC1Q76NI1 1749 aa33.93■■■■□ 3.02
SNF8-217ENST00000576353 ADGRB1O14514 1584 aa33.91■■■■□ 3.02
SNF8-217ENST00000576353 PLEKHH1Q9ULM0 1364 aa33.91■■■■□ 3.02
SNF8-217ENST00000576353 L3MBTL2Q969R5 705 aa33.91■■■■□ 3.02
SNF8-217ENST00000576353 PRAM1Q96QH2 718 aa33.89■■■■□ 3.02
SNF8-217ENST00000576353 POGKQ9P215 609 aa33.88■■■■□ 3.01
SNF8-217ENST00000576353 TRAK1Q9UPV9 953 aa33.87■■■■□ 3.01
SNF8-217ENST00000576353 C1orf167Q5SNV9 1468 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms