RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
LITAF-219ENST00000576334 XIRP1Q702N8 1843 aaKnown RBP18.05■□□□□ 0.48
LITAF-219ENST00000576334 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
LITAF-219ENST00000576334 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
LITAF-219ENST00000576334 TOM1O60784 492 aa18.03■□□□□ 0.48
LITAF-219ENST00000576334 BCANQ96GW7 911 aa18.03■□□□□ 0.48
LITAF-219ENST00000576334 HSPA1LP34931 641 aa18.01■□□□□ 0.47
LITAF-219ENST00000576334 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
LITAF-219ENST00000576334 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
LITAF-219ENST00000576334 HFM1A2PYH4 1435 aa17.98■□□□□ 0.47
LITAF-219ENST00000576334 KCNA6P17658 529 aa17.98■□□□□ 0.47
LITAF-219ENST00000576334 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
LITAF-219ENST00000576334 DISP3Q9P2K9 1392 aa17.98■□□□□ 0.47
LITAF-219ENST00000576334 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
LITAF-219ENST00000576334 TMEM94Q12767 1356 aa17.96■□□□□ 0.47
LITAF-219ENST00000576334 CLTCL1P53675 1640 aa17.96■□□□□ 0.47
LITAF-219ENST00000576334 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
LITAF-219ENST00000576334 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
LITAF-219ENST00000576334 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
LITAF-219ENST00000576334 NWD1Q149M9 1564 aa17.94■□□□□ 0.46
LITAF-219ENST00000576334 FOXD1Q16676 465 aa17.93■□□□□ 0.46
LITAF-219ENST00000576334 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
LITAF-219ENST00000576334 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
LITAF-219ENST00000576334 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
LITAF-219ENST00000576334 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
LITAF-219ENST00000576334 TRPM2O94759 1503 aa17.9■□□□□ 0.46
LITAF-219ENST00000576334 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
LITAF-219ENST00000576334 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
LITAF-219ENST00000576334 NRXN3Q9Y4C0 1643 aa17.89■□□□□ 0.45
LITAF-219ENST00000576334 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
LITAF-219ENST00000576334 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
LITAF-219ENST00000576334 KIF1BO60333 1816 aa17.86■□□□□ 0.45
LITAF-219ENST00000576334 NEXMIFQ5QGS0 1516 aa17.86■□□□□ 0.45
LITAF-219ENST00000576334 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
LITAF-219ENST00000576334 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
LITAF-219ENST00000576334 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.44
LITAF-219ENST00000576334 METP08581 1390 aa17.82■□□□□ 0.44
LITAF-219ENST00000576334 ROBO1Q9Y6N7 1651 aa17.82■□□□□ 0.44
LITAF-219ENST00000576334 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
LITAF-219ENST00000576334 MSH6P52701 1360 aa17.8■□□□□ 0.44
LITAF-219ENST00000576334 MPHOSPH9Q99550 1183 aa17.8■□□□□ 0.44
LITAF-219ENST00000576334 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
LITAF-219ENST00000576334 C14orf37Q86TY3 774 aa17.79■□□□□ 0.44
LITAF-219ENST00000576334 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
LITAF-219ENST00000576334 XRN1Q8IZH2 1706 aaKnown RBP17.78■□□□□ 0.44
LITAF-219ENST00000576334 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
LITAF-219ENST00000576334 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
LITAF-219ENST00000576334 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
LITAF-219ENST00000576334 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
LITAF-219ENST00000576334 PPLO60437 1756 aa17.75■□□□□ 0.43
LITAF-219ENST00000576334 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
LITAF-219ENST00000576334 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
LITAF-219ENST00000576334 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
LITAF-219ENST00000576334 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
LITAF-219ENST00000576334 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
LITAF-219ENST00000576334 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
LITAF-219ENST00000576334 PHLPP1O60346 1717 aa17.71■□□□□ 0.43
LITAF-219ENST00000576334 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.42
LITAF-219ENST00000576334 SPATA31E1Q6ZUB1 1445 aa17.7■□□□□ 0.42
LITAF-219ENST00000576334 ATF3P18847 181 aa17.69■□□□□ 0.42
LITAF-219ENST00000576334 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
LITAF-219ENST00000576334 NALCNQ8IZF0 1738 aa17.68■□□□□ 0.42
LITAF-219ENST00000576334 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
LITAF-219ENST00000576334 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
LITAF-219ENST00000576334 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
LITAF-219ENST00000576334 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
LITAF-219ENST00000576334 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
LITAF-219ENST00000576334 SOCS7O14512 581 aa17.65■□□□□ 0.42
LITAF-219ENST00000576334 BRINP3Q76B58 766 aa17.65■□□□□ 0.42
LITAF-219ENST00000576334 RGS17Q9UGC6 210 aaPredicted RBP17.65■□□□□ 0.42
LITAF-219ENST00000576334 MST1RQ04912 1400 aa17.64■□□□□ 0.41
LITAF-219ENST00000576334 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
LITAF-219ENST00000576334 ADGRL3Q9HAR2 1447 aa17.63■□□□□ 0.41
LITAF-219ENST00000576334 TMEM132EQ6IEE7 984 aa17.62■□□□□ 0.41
LITAF-219ENST00000576334 STK26Q9P289 416 aa17.61■□□□□ 0.41
LITAF-219ENST00000576334 DCCP43146 1447 aa17.61■□□□□ 0.41
LITAF-219ENST00000576334 ASXL1Q8IXJ9 1541 aa17.61■□□□□ 0.41
LITAF-219ENST00000576334 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
LITAF-219ENST00000576334 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
LITAF-219ENST00000576334 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
LITAF-219ENST00000576334 JCADQ9P266 1359 aa17.58■□□□□ 0.4
LITAF-219ENST00000576334 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
LITAF-219ENST00000576334 WAPLQ7Z5K2 1190 aa17.57■□□□□ 0.4
LITAF-219ENST00000576334 LRP6O75581 1613 aa17.56■□□□□ 0.4
LITAF-219ENST00000576334 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 C1orf167Q5SNV9 1468 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
LITAF-219ENST00000576334 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
LITAF-219ENST00000576334 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
LITAF-219ENST00000576334 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
LITAF-219ENST00000576334 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
LITAF-219ENST00000576334 NRXN1Q9ULB1 1477 aa17.51■□□□□ 0.39
LITAF-219ENST00000576334 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
LITAF-219ENST00000576334 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
LITAF-219ENST00000576334 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
LITAF-219ENST00000576334 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
LITAF-219ENST00000576334 C14orf93Q9H972 538 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms