RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
TRAPPC1-207ENST00000575639 BCANQ96GW7 911 aa22.05■■□□□ 1.12
TRAPPC1-207ENST00000575639 TRPM2O94759 1503 aa22.05■■□□□ 1.12
TRAPPC1-207ENST00000575639 RIMS2Q9UQ26 1411 aa22.04■■□□□ 1.12
TRAPPC1-207ENST00000575639 CCDC144AA2RUR9 1427 aa22.01■■□□□ 1.11
TRAPPC1-207ENST00000575639 ZNF335Q9H4Z2 1342 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC1-207ENST00000575639 NEURL4Q96JN8 1562 aa22■■□□□ 1.11
TRAPPC1-207ENST00000575639 TMEM131LA2VDJ0 1609 aa22■■□□□ 1.11
TRAPPC1-207ENST00000575639 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
TRAPPC1-207ENST00000575639 ZFYVE9O95405 1425 aa21.99■■□□□ 1.11
TRAPPC1-207ENST00000575639 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC1-207ENST00000575639 UBAP1LF5GYI3 381 aa21.97■■□□□ 1.11
TRAPPC1-207ENST00000575639 RPGRIP1LQ68CZ1 1315 aa21.97■■□□□ 1.11
TRAPPC1-207ENST00000575639 PLEKHG1Q9ULL1 1385 aa21.97■■□□□ 1.11
TRAPPC1-207ENST00000575639 SLC26A8Q96RN1 970 aa21.96■■□□□ 1.11
TRAPPC1-207ENST00000575639 POLR1AO95602 1720 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC1-207ENST00000575639 CLTCL1P53675 1640 aa21.95■■□□□ 1.1
TRAPPC1-207ENST00000575639 VGFO15240 615 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC1-207ENST00000575639 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
TRAPPC1-207ENST00000575639 IQGAP1P46940 1657 aa21.92■■□□□ 1.1
TRAPPC1-207ENST00000575639 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
TRAPPC1-207ENST00000575639 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
TRAPPC1-207ENST00000575639 TBX22Q9Y458 520 aa21.91■■□□□ 1.1
TRAPPC1-207ENST00000575639 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
TRAPPC1-207ENST00000575639 KCNA6P17658 529 aa21.88■■□□□ 1.09
TRAPPC1-207ENST00000575639 CPS1P31327 1500 aa21.85■■□□□ 1.09
TRAPPC1-207ENST00000575639 SPATA31E1Q6ZUB1 1445 aa21.85■■□□□ 1.09
TRAPPC1-207ENST00000575639 HSPA1LP34931 641 aa21.84■■□□□ 1.09
TRAPPC1-207ENST00000575639 KIF1BO60333 1816 aa21.82■■□□□ 1.08
TRAPPC1-207ENST00000575639 MYO5BQ9ULV0 1848 aa21.82■■□□□ 1.08
TRAPPC1-207ENST00000575639 ADAMTS13Q76LX8 1427 aa21.81■■□□□ 1.08
TRAPPC1-207ENST00000575639 NEXMIFQ5QGS0 1516 aa21.81■■□□□ 1.08
TRAPPC1-207ENST00000575639 PIK3R4Q99570 1358 aa21.8■■□□□ 1.08
TRAPPC1-207ENST00000575639 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC1-207ENST00000575639 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
TRAPPC1-207ENST00000575639 DIP2AQ14689 1571 aa21.76■■□□□ 1.07
TRAPPC1-207ENST00000575639 STAC3Q96MF2 364 aa21.76■■□□□ 1.07
TRAPPC1-207ENST00000575639 AMOTL2Q9Y2J4 779 aa21.76■■□□□ 1.07
TRAPPC1-207ENST00000575639 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
TRAPPC1-207ENST00000575639 SETBP1Q9Y6X0 1596 aa21.74■■□□□ 1.07
TRAPPC1-207ENST00000575639 LRRC7Q96NW7 1537 aa21.74■■□□□ 1.07
TRAPPC1-207ENST00000575639 TOM1O60784 492 aa21.73■■□□□ 1.07
TRAPPC1-207ENST00000575639 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
TRAPPC1-207ENST00000575639 DHX57Q6P158 1386 aaKnown RBP21.73■■□□□ 1.07
TRAPPC1-207ENST00000575639 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC1-207ENST00000575639 METP08581 1390 aa21.72■■□□□ 1.07
TRAPPC1-207ENST00000575639 TMEM94Q12767 1356 aa21.72■■□□□ 1.07
TRAPPC1-207ENST00000575639 NKTRP30414 1462 aaKnown RBP21.71■■□□□ 1.07
TRAPPC1-207ENST00000575639 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
TRAPPC1-207ENST00000575639 PIP4K2BP78356 416 aa21.7■■□□□ 1.06
TRAPPC1-207ENST00000575639 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
TRAPPC1-207ENST00000575639 C14orf37Q86TY3 774 aa21.68■■□□□ 1.06
TRAPPC1-207ENST00000575639 RBM33Q96EV2 1170 aaKnown RBP21.68■■□□□ 1.06
TRAPPC1-207ENST00000575639 NEUROD1Q13562 356 aa21.67■■□□□ 1.06
TRAPPC1-207ENST00000575639 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
TRAPPC1-207ENST00000575639 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
TRAPPC1-207ENST00000575639 C14orf93Q9H972 538 aaKnown RBP21.66■■□□□ 1.06
TRAPPC1-207ENST00000575639 NWD1Q149M9 1564 aa21.65■■□□□ 1.06
TRAPPC1-207ENST00000575639 MYOM2P54296 1465 aa21.65■■□□□ 1.06
TRAPPC1-207ENST00000575639 PIK3C2GO75747 1445 aa21.65■■□□□ 1.06
TRAPPC1-207ENST00000575639 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
TRAPPC1-207ENST00000575639 NCOA3Q9Y6Q9 1424 aa21.64■■□□□ 1.06
TRAPPC1-207ENST00000575639 PPLO60437 1756 aa21.64■■□□□ 1.06
TRAPPC1-207ENST00000575639 ALKQ9UM73 1620 aa21.64■■□□□ 1.05
TRAPPC1-207ENST00000575639 MSH6P52701 1360 aa21.63■■□□□ 1.05
TRAPPC1-207ENST00000575639 STRCP1A6NGW2 1772 aa21.63■■□□□ 1.05
TRAPPC1-207ENST00000575639 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
TRAPPC1-207ENST00000575639 NRXN1Q9ULB1 1477 aa21.62■■□□□ 1.05
TRAPPC1-207ENST00000575639 TMEM132EQ6IEE7 984 aa21.61■■□□□ 1.05
TRAPPC1-207ENST00000575639 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
TRAPPC1-207ENST00000575639 STK26Q9P289 416 aa21.6■■□□□ 1.05
TRAPPC1-207ENST00000575639 CHD2O14647 1828 aaKnown RBP21.59■■□□□ 1.05
TRAPPC1-207ENST00000575639 ATF3P18847 181 aa21.58■■□□□ 1.05
TRAPPC1-207ENST00000575639 L3MBTL2Q969R5 705 aa21.58■■□□□ 1.05
TRAPPC1-207ENST00000575639 LRPPRCP42704 1394 aaKnown RBP21.58■■□□□ 1.04
TRAPPC1-207ENST00000575639 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
TRAPPC1-207ENST00000575639 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
TRAPPC1-207ENST00000575639 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
TRAPPC1-207ENST00000575639 RGS17Q9UGC6 210 aaPredicted RBP21.55■■□□□ 1.04
TRAPPC1-207ENST00000575639 IFT172Q9UG01 1749 aa21.55■■□□□ 1.04
TRAPPC1-207ENST00000575639 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
TRAPPC1-207ENST00000575639 SLAIN2Q9P270 581 aa21.54■■□□□ 1.04
TRAPPC1-207ENST00000575639 SIRT1Q96EB6 747 aa21.53■■□□□ 1.04
TRAPPC1-207ENST00000575639 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
TRAPPC1-207ENST00000575639 YTHDC2Q9H6S0 1430 aaKnown RBP21.53■■□□□ 1.04
TRAPPC1-207ENST00000575639 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.03
TRAPPC1-207ENST00000575639 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
TRAPPC1-207ENST00000575639 TECPR2O15040 1411 aa21.5■■□□□ 1.03
TRAPPC1-207ENST00000575639 WAPLQ7Z5K2 1190 aa21.49■■□□□ 1.03
TRAPPC1-207ENST00000575639 CLSPNQ9HAW4 1339 aa21.49■■□□□ 1.03
TRAPPC1-207ENST00000575639 DCCP43146 1447 aa21.47■■□□□ 1.03
TRAPPC1-207ENST00000575639 ADGRL3Q9HAR2 1447 aa21.47■■□□□ 1.03
TRAPPC1-207ENST00000575639 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
TRAPPC1-207ENST00000575639 POGKQ9P215 609 aa21.47■■□□□ 1.03
TRAPPC1-207ENST00000575639 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
TRAPPC1-207ENST00000575639 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
TRAPPC1-207ENST00000575639 LAMC1P11047 1609 aa21.46■■□□□ 1.03
TRAPPC1-207ENST00000575639 ASXL1Q8IXJ9 1541 aa21.45■■□□□ 1.02
TRAPPC1-207ENST00000575639 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC1-207ENST00000575639 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms