RNA–Protein interactions for RNA: ENST00000575637.1

CHRNE-203, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 3

Gene CHRNE, Length 557 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-203ENST00000575637 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
CHRNE-203ENST00000575637 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.78
CHRNE-203ENST00000575637 CLTCL1P53675 1640 aa26.2■■□□□ 1.78
CHRNE-203ENST00000575637 PPP1R15AO75807 674 aaPredicted RBP26.18■■□□□ 1.78
CHRNE-203ENST00000575637 NUTM2DQ5VT03 806 aaPredicted RBP26.18■■□□□ 1.78
CHRNE-203ENST00000575637 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.18■■□□□ 1.78
CHRNE-203ENST00000575637 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
CHRNE-203ENST00000575637 PLEKHG1Q9ULL1 1385 aa26.17■■□□□ 1.78
CHRNE-203ENST00000575637 CPS1P31327 1500 aa26.16■■□□□ 1.78
CHRNE-203ENST00000575637 SLC26A8Q96RN1 970 aa26.16■■□□□ 1.78
CHRNE-203ENST00000575637 IQSEC2Q5JU85 1478 aa26.16■■□□□ 1.78
CHRNE-203ENST00000575637 BCANQ96GW7 911 aa26.15■■□□□ 1.78
CHRNE-203ENST00000575637 ZNF326Q5BKZ1 582 aaKnown RBP26.13■■□□□ 1.77
CHRNE-203ENST00000575637 HRCP23327 699 aa26.12■■□□□ 1.77
CHRNE-203ENST00000575637 STRCP1A6NGW2 1772 aa26.1■■□□□ 1.77
CHRNE-203ENST00000575637 CCDC144AA2RUR9 1427 aa26.06■■□□□ 1.76
CHRNE-203ENST00000575637 ADAMTS13Q76LX8 1427 aa26.05■■□□□ 1.76
CHRNE-203ENST00000575637 LRRC7Q96NW7 1537 aa26.05■■□□□ 1.76
CHRNE-203ENST00000575637 TBX22Q9Y458 520 aa26.05■■□□□ 1.76
CHRNE-203ENST00000575637 KIF1BO60333 1816 aa26.04■■□□□ 1.76
CHRNE-203ENST00000575637 KCNA6P17658 529 aa26.04■■□□□ 1.76
CHRNE-203ENST00000575637 NEXMIFQ5QGS0 1516 aa26.04■■□□□ 1.76
CHRNE-203ENST00000575637 UBAP1LF5GYI3 381 aa26.02■■□□□ 1.76
CHRNE-203ENST00000575637 SPATA31E1Q6ZUB1 1445 aa25.98■■□□□ 1.75
CHRNE-203ENST00000575637 RPGRIP1LQ68CZ1 1315 aa25.98■■□□□ 1.75
CHRNE-203ENST00000575637 DIP2AQ14689 1571 aa25.97■■□□□ 1.75
CHRNE-203ENST00000575637 SETBP1Q9Y6X0 1596 aa25.97■■□□□ 1.75
CHRNE-203ENST00000575637 NWD1Q149M9 1564 aa25.96■■□□□ 1.75
CHRNE-203ENST00000575637 RGL3Q3MIN7 710 aa25.96■■□□□ 1.75
CHRNE-203ENST00000575637 VGFO15240 615 aaPredicted RBP25.95■■□□□ 1.74
CHRNE-203ENST00000575637 NRXN3Q9Y4C0 1643 aa25.95■■□□□ 1.74
CHRNE-203ENST00000575637 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.74
CHRNE-203ENST00000575637 NKTRP30414 1462 aaKnown RBP25.94■■□□□ 1.74
CHRNE-203ENST00000575637 PROSER2Q86WR7 435 aaPredicted RBP25.94■■□□□ 1.74
CHRNE-203ENST00000575637 TMEM94Q12767 1356 aa25.94■■□□□ 1.74
CHRNE-203ENST00000575637 PIK3R4Q99570 1358 aa25.94■■□□□ 1.74
CHRNE-203ENST00000575637 RBM33Q96EV2 1170 aaKnown RBP25.92■■□□□ 1.74
CHRNE-203ENST00000575637 TOM1O60784 492 aa25.91■■□□□ 1.74
CHRNE-203ENST00000575637 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
CHRNE-203ENST00000575637 PTPRUQ92729 1446 aa25.9■■□□□ 1.74
CHRNE-203ENST00000575637 METP08581 1390 aa25.89■■□□□ 1.74
CHRNE-203ENST00000575637 AMOTL2Q9Y2J4 779 aa25.88■■□□□ 1.73
CHRNE-203ENST00000575637 PPLO60437 1756 aa25.87■■□□□ 1.73
CHRNE-203ENST00000575637 ALKQ9UM73 1620 aa25.87■■□□□ 1.73
CHRNE-203ENST00000575637 ADGRF5Q8IZF2 1346 aa25.87■■□□□ 1.73
CHRNE-203ENST00000575637 XIRP1Q702N8 1843 aaKnown RBP25.86■■□□□ 1.73
CHRNE-203ENST00000575637 PIP4K2BP78356 416 aa25.85■■□□□ 1.73
CHRNE-203ENST00000575637 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
CHRNE-203ENST00000575637 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
CHRNE-203ENST00000575637 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
CHRNE-203ENST00000575637 XRN1Q8IZH2 1706 aaKnown RBP25.79■■□□□ 1.72
CHRNE-203ENST00000575637 MSH6P52701 1360 aa25.77■■□□□ 1.72
CHRNE-203ENST00000575637 NCOA3Q9Y6Q9 1424 aa25.77■■□□□ 1.72
CHRNE-203ENST00000575637 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
CHRNE-203ENST00000575637 PIK3C2GO75747 1445 aa25.76■■□□□ 1.71
CHRNE-203ENST00000575637 C14orf37Q86TY3 774 aa25.74■■□□□ 1.71
CHRNE-203ENST00000575637 MYOM2P54296 1465 aa25.73■■□□□ 1.71
CHRNE-203ENST00000575637 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
CHRNE-203ENST00000575637 HSPA1LP34931 641 aa25.71■■□□□ 1.71
CHRNE-203ENST00000575637 C19orf44Q9H6X5 657 aa25.7■■□□□ 1.7
CHRNE-203ENST00000575637 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
CHRNE-203ENST00000575637 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
CHRNE-203ENST00000575637 C14orf93Q9H972 538 aaKnown RBP25.68■■□□□ 1.7
CHRNE-203ENST00000575637 PTCH1Q13635 1447 aa25.68■■□□□ 1.7
CHRNE-203ENST00000575637 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
CHRNE-203ENST00000575637 TMEM132EQ6IEE7 984 aa25.67■■□□□ 1.7
CHRNE-203ENST00000575637 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
CHRNE-203ENST00000575637 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
CHRNE-203ENST00000575637 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
CHRNE-203ENST00000575637 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
CHRNE-203ENST00000575637 KDM2AQ9Y2K7 1162 aa25.66■■□□□ 1.7
CHRNE-203ENST00000575637 ASXL1Q8IXJ9 1541 aa25.66■■□□□ 1.7
CHRNE-203ENST00000575637 ATF3P18847 181 aa25.64■■□□□ 1.7
CHRNE-203ENST00000575637 CADPS2Q86UW7 1296 aa25.64■■□□□ 1.7
CHRNE-203ENST00000575637 STK26Q9P289 416 aa25.64■■□□□ 1.7
CHRNE-203ENST00000575637 LRPPRCP42704 1394 aaKnown RBP25.64■■□□□ 1.69
CHRNE-203ENST00000575637 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
CHRNE-203ENST00000575637 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
CHRNE-203ENST00000575637 ADGRL3Q9HAR2 1447 aa25.62■■□□□ 1.69
CHRNE-203ENST00000575637 DCCP43146 1447 aa25.61■■□□□ 1.69
CHRNE-203ENST00000575637 ABCC11Q96J66 1382 aa25.6■■□□□ 1.69
CHRNE-203ENST00000575637 TECPR2O15040 1411 aa25.6■■□□□ 1.69
CHRNE-203ENST00000575637 YTHDC2Q9H6S0 1430 aaKnown RBP25.6■■□□□ 1.69
CHRNE-203ENST00000575637 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
CHRNE-203ENST00000575637 LAMC1P11047 1609 aa25.57■■□□□ 1.68
CHRNE-203ENST00000575637 ROBO1Q9Y6N7 1651 aa25.57■■□□□ 1.68
CHRNE-203ENST00000575637 NALCNQ8IZF0 1738 aa25.55■■□□□ 1.68
CHRNE-203ENST00000575637 WAPLQ7Z5K2 1190 aa25.55■■□□□ 1.68
CHRNE-203ENST00000575637 PLEKHH1Q9ULM0 1364 aa25.53■■□□□ 1.68
CHRNE-203ENST00000575637 MST1RQ04912 1400 aa25.53■■□□□ 1.68
CHRNE-203ENST00000575637 ADGRB1O14514 1584 aa25.52■■□□□ 1.68
CHRNE-203ENST00000575637 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
CHRNE-203ENST00000575637 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
CHRNE-203ENST00000575637 SIRT1Q96EB6 747 aa25.5■■□□□ 1.67
CHRNE-203ENST00000575637 BRINP3Q76B58 766 aa25.49■■□□□ 1.67
CHRNE-203ENST00000575637 L3MBTL2Q969R5 705 aa25.49■■□□□ 1.67
CHRNE-203ENST00000575637 PRAM1Q96QH2 718 aa25.45■■□□□ 1.66
CHRNE-203ENST00000575637 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
CHRNE-203ENST00000575637 TRAK1Q9UPV9 953 aa25.44■■□□□ 1.66
CHRNE-203ENST00000575637 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms