RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
USP43-206ENST00000575346 PLEKHG1Q9ULL1 1385 aa18.06■□□□□ 0.48
USP43-206ENST00000575346 TOM1O60784 492 aa18.04■□□□□ 0.48
USP43-206ENST00000575346 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
USP43-206ENST00000575346 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP43-206ENST00000575346 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
USP43-206ENST00000575346 HSPA1LP34931 641 aa18.03■□□□□ 0.48
USP43-206ENST00000575346 TRPM2O94759 1503 aa18.03■□□□□ 0.48
USP43-206ENST00000575346 SCAF1Q9H7N4 1312 aaKnown RBP18.02■□□□□ 0.48
USP43-206ENST00000575346 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.48
USP43-206ENST00000575346 KCNA6P17658 529 aa18.02■□□□□ 0.48
USP43-206ENST00000575346 NWD1Q149M9 1564 aa18.02■□□□□ 0.48
USP43-206ENST00000575346 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
USP43-206ENST00000575346 XIRP1Q702N8 1843 aaKnown RBP18■□□□□ 0.47
USP43-206ENST00000575346 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
USP43-206ENST00000575346 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
USP43-206ENST00000575346 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
USP43-206ENST00000575346 TBX22Q9Y458 520 aa17.99■□□□□ 0.47
USP43-206ENST00000575346 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
USP43-206ENST00000575346 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
USP43-206ENST00000575346 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
USP43-206ENST00000575346 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
USP43-206ENST00000575346 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
USP43-206ENST00000575346 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
USP43-206ENST00000575346 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
USP43-206ENST00000575346 BCANQ96GW7 911 aa17.95■□□□□ 0.46
USP43-206ENST00000575346 KIF1BO60333 1816 aa17.95■□□□□ 0.46
USP43-206ENST00000575346 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
USP43-206ENST00000575346 NEXMIFQ5QGS0 1516 aa17.93■□□□□ 0.46
USP43-206ENST00000575346 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
USP43-206ENST00000575346 NUTM2DQ5VT03 806 aaPredicted RBP17.92■□□□□ 0.46
USP43-206ENST00000575346 NRXN3Q9Y4C0 1643 aa17.91■□□□□ 0.46
USP43-206ENST00000575346 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
USP43-206ENST00000575346 SETD5Q9C0A6 1442 aa17.9■□□□□ 0.46
USP43-206ENST00000575346 NCOA3Q9Y6Q9 1424 aa17.9■□□□□ 0.46
USP43-206ENST00000575346 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
USP43-206ENST00000575346 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
USP43-206ENST00000575346 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
USP43-206ENST00000575346 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
USP43-206ENST00000575346 RPGRIP1LQ68CZ1 1315 aa17.86■□□□□ 0.45
USP43-206ENST00000575346 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
USP43-206ENST00000575346 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
USP43-206ENST00000575346 MSH6P52701 1360 aa17.84■□□□□ 0.45
USP43-206ENST00000575346 FOXD1Q16676 465 aa17.84■□□□□ 0.45
USP43-206ENST00000575346 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
USP43-206ENST00000575346 XRN1Q8IZH2 1706 aaKnown RBP17.84■□□□□ 0.45
USP43-206ENST00000575346 VGFO15240 615 aaPredicted RBP17.83■□□□□ 0.44
USP43-206ENST00000575346 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
USP43-206ENST00000575346 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
USP43-206ENST00000575346 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
USP43-206ENST00000575346 PPLO60437 1756 aa17.82■□□□□ 0.44
USP43-206ENST00000575346 METP08581 1390 aa17.81■□□□□ 0.44
USP43-206ENST00000575346 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
USP43-206ENST00000575346 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
USP43-206ENST00000575346 HRCP23327 699 aa17.8■□□□□ 0.44
USP43-206ENST00000575346 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
USP43-206ENST00000575346 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
USP43-206ENST00000575346 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
USP43-206ENST00000575346 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.77■□□□□ 0.44
USP43-206ENST00000575346 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
USP43-206ENST00000575346 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
USP43-206ENST00000575346 SLAIN2Q9P270 581 aa17.76■□□□□ 0.43
USP43-206ENST00000575346 DCCP43146 1447 aa17.75■□□□□ 0.43
USP43-206ENST00000575346 CADPS2Q86UW7 1296 aa17.75■□□□□ 0.43
USP43-206ENST00000575346 ANKRD30BQ9BXX2 1392 aa17.75■□□□□ 0.43
USP43-206ENST00000575346 PTCH1Q13635 1447 aa17.72■□□□□ 0.43
USP43-206ENST00000575346 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
USP43-206ENST00000575346 RGS17Q9UGC6 210 aaPredicted RBP17.72■□□□□ 0.43
USP43-206ENST00000575346 ATF3P18847 181 aa17.71■□□□□ 0.43
USP43-206ENST00000575346 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.42
USP43-206ENST00000575346 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
USP43-206ENST00000575346 ADGRL3Q9HAR2 1447 aa17.7■□□□□ 0.42
USP43-206ENST00000575346 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
USP43-206ENST00000575346 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
USP43-206ENST00000575346 MST1RQ04912 1400 aa17.66■□□□□ 0.42
USP43-206ENST00000575346 AHDC1Q5TGY3 1603 aaPredicted RBP17.66■□□□□ 0.42
USP43-206ENST00000575346 MYOM2P54296 1465 aa17.66■□□□□ 0.42
USP43-206ENST00000575346 NRXN1Q9ULB1 1477 aa17.66■□□□□ 0.42
USP43-206ENST00000575346 PHLPP1O60346 1717 aa17.66■□□□□ 0.42
USP43-206ENST00000575346 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
USP43-206ENST00000575346 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
USP43-206ENST00000575346 TECPR2O15040 1411 aa17.64■□□□□ 0.42
USP43-206ENST00000575346 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
USP43-206ENST00000575346 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
USP43-206ENST00000575346 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
USP43-206ENST00000575346 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
USP43-206ENST00000575346 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
USP43-206ENST00000575346 ABCC11Q96J66 1382 aa17.61■□□□□ 0.41
USP43-206ENST00000575346 JCADQ9P266 1359 aa17.61■□□□□ 0.41
USP43-206ENST00000575346 LAMC1P11047 1609 aa17.61■□□□□ 0.41
USP43-206ENST00000575346 NHSL1Q5SYE7 1610 aa17.59■□□□□ 0.41
USP43-206ENST00000575346 POTEAQ6S8J7 498 aa17.59■□□□□ 0.41
USP43-206ENST00000575346 SIRT1Q96EB6 747 aa17.58■□□□□ 0.4
USP43-206ENST00000575346 STAC3Q96MF2 364 aa17.58■□□□□ 0.4
USP43-206ENST00000575346 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
USP43-206ENST00000575346 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
USP43-206ENST00000575346 CDC42BPGQ6DT37 1551 aa17.57■□□□□ 0.4
USP43-206ENST00000575346 TMEM132EQ6IEE7 984 aa17.56■□□□□ 0.4
USP43-206ENST00000575346 SHPRHQ149N8 1683 aa17.55■□□□□ 0.4
USP43-206ENST00000575346 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms