RNA–Protein interactions for RNA: ENST00000574593.1

SRRM2-220, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-220ENST00000574593 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
SRRM2-220ENST00000574593 LRRC7Q96NW7 1537 aa23.68■■□□□ 1.38
SRRM2-220ENST00000574593 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
SRRM2-220ENST00000574593 TOM1O60784 492 aa23.67■■□□□ 1.38
SRRM2-220ENST00000574593 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
SRRM2-220ENST00000574593 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
SRRM2-220ENST00000574593 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
SRRM2-220ENST00000574593 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
SRRM2-220ENST00000574593 PIP4K2BP78356 416 aa23.62■■□□□ 1.37
SRRM2-220ENST00000574593 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
SRRM2-220ENST00000574593 TRPM2O94759 1503 aa23.62■■□□□ 1.37
SRRM2-220ENST00000574593 NUTM2DQ5VT03 806 aaPredicted RBP23.61■■□□□ 1.37
SRRM2-220ENST00000574593 KCNA6P17658 529 aa23.6■■□□□ 1.37
SRRM2-220ENST00000574593 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
SRRM2-220ENST00000574593 ZNF326Q5BKZ1 582 aaKnown RBP23.59■■□□□ 1.37
SRRM2-220ENST00000574593 NWD1Q149M9 1564 aa23.55■■□□□ 1.36
SRRM2-220ENST00000574593 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
SRRM2-220ENST00000574593 KIF1BO60333 1816 aa23.53■■□□□ 1.36
SRRM2-220ENST00000574593 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
SRRM2-220ENST00000574593 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
SRRM2-220ENST00000574593 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
SRRM2-220ENST00000574593 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
SRRM2-220ENST00000574593 XIRP1Q702N8 1843 aaKnown RBP23.52■■□□□ 1.36
SRRM2-220ENST00000574593 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
SRRM2-220ENST00000574593 ADAMTS13Q76LX8 1427 aa23.51■■□□□ 1.35
SRRM2-220ENST00000574593 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
SRRM2-220ENST00000574593 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
SRRM2-220ENST00000574593 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
SRRM2-220ENST00000574593 FOXD1Q16676 465 aa23.48■■□□□ 1.35
SRRM2-220ENST00000574593 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
SRRM2-220ENST00000574593 HSPA1LP34931 641 aa23.47■■□□□ 1.35
SRRM2-220ENST00000574593 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
SRRM2-220ENST00000574593 NEXMIFQ5QGS0 1516 aa23.47■■□□□ 1.35
SRRM2-220ENST00000574593 PIK3R4Q99570 1358 aa23.46■■□□□ 1.35
SRRM2-220ENST00000574593 SETBP1Q9Y6X0 1596 aa23.45■■□□□ 1.34
SRRM2-220ENST00000574593 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
SRRM2-220ENST00000574593 MSH6P52701 1360 aa23.43■■□□□ 1.34
SRRM2-220ENST00000574593 NRXN3Q9Y4C0 1643 aa23.43■■□□□ 1.34
SRRM2-220ENST00000574593 RAB3GAP2Q9H2M9 1393 aa23.41■■□□□ 1.34
SRRM2-220ENST00000574593 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
SRRM2-220ENST00000574593 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
SRRM2-220ENST00000574593 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
SRRM2-220ENST00000574593 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
SRRM2-220ENST00000574593 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
SRRM2-220ENST00000574593 PTPRUQ92729 1446 aa23.37■■□□□ 1.33
SRRM2-220ENST00000574593 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
SRRM2-220ENST00000574593 METP08581 1390 aa23.35■■□□□ 1.33
SRRM2-220ENST00000574593 PPLO60437 1756 aa23.34■■□□□ 1.33
SRRM2-220ENST00000574593 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.32
SRRM2-220ENST00000574593 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.32
SRRM2-220ENST00000574593 RGL3Q3MIN7 710 aa23.32■■□□□ 1.32
SRRM2-220ENST00000574593 ROBO1Q9Y6N7 1651 aa23.31■■□□□ 1.32
SRRM2-220ENST00000574593 C19orf44Q9H6X5 657 aa23.29■■□□□ 1.32
SRRM2-220ENST00000574593 SLAIN2Q9P270 581 aa23.29■■□□□ 1.32
SRRM2-220ENST00000574593 SPATA31E1Q6ZUB1 1445 aa23.29■■□□□ 1.32
SRRM2-220ENST00000574593 ATF3P18847 181 aa23.27■■□□□ 1.32
SRRM2-220ENST00000574593 CADPS2Q86UW7 1296 aa23.27■■□□□ 1.32
SRRM2-220ENST00000574593 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.27■■□□□ 1.31
SRRM2-220ENST00000574593 ANKRD30BQ9BXX2 1392 aa23.26■■□□□ 1.31
SRRM2-220ENST00000574593 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
SRRM2-220ENST00000574593 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
SRRM2-220ENST00000574593 HRCP23327 699 aa23.24■■□□□ 1.31
SRRM2-220ENST00000574593 IFT172Q9UG01 1749 aa23.23■■□□□ 1.31
SRRM2-220ENST00000574593 ADGRF5Q8IZF2 1346 aa23.23■■□□□ 1.31
SRRM2-220ENST00000574593 DCCP43146 1447 aa23.22■■□□□ 1.31
SRRM2-220ENST00000574593 PTCH1Q13635 1447 aa23.2■■□□□ 1.3
SRRM2-220ENST00000574593 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
SRRM2-220ENST00000574593 PHLPP1O60346 1717 aa23.17■■□□□ 1.3
SRRM2-220ENST00000574593 PIK3C2GO75747 1445 aa23.16■■□□□ 1.3
SRRM2-220ENST00000574593 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
SRRM2-220ENST00000574593 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
SRRM2-220ENST00000574593 PRAG1Q86YV5 1406 aa23.15■■□□□ 1.3
SRRM2-220ENST00000574593 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
SRRM2-220ENST00000574593 ILDR2Q71H61 639 aa23.14■■□□□ 1.29
SRRM2-220ENST00000574593 MST1RQ04912 1400 aa23.12■■□□□ 1.29
SRRM2-220ENST00000574593 MYOM2P54296 1465 aa23.12■■□□□ 1.29
SRRM2-220ENST00000574593 BRINP3Q76B58 766 aa23.1■■□□□ 1.29
SRRM2-220ENST00000574593 STK26Q9P289 416 aa23.1■■□□□ 1.29
SRRM2-220ENST00000574593 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.29
SRRM2-220ENST00000574593 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
SRRM2-220ENST00000574593 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
SRRM2-220ENST00000574593 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
SRRM2-220ENST00000574593 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.28
SRRM2-220ENST00000574593 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.28
SRRM2-220ENST00000574593 JCADQ9P266 1359 aa23.07■■□□□ 1.28
SRRM2-220ENST00000574593 LAMC1P11047 1609 aa23.07■■□□□ 1.28
SRRM2-220ENST00000574593 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
SRRM2-220ENST00000574593 TECPR2O15040 1411 aa23.06■■□□□ 1.28
SRRM2-220ENST00000574593 KNDC1Q76NI1 1749 aa23.05■■□□□ 1.28
SRRM2-220ENST00000574593 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
SRRM2-220ENST00000574593 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
SRRM2-220ENST00000574593 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
SRRM2-220ENST00000574593 C1orf167Q5SNV9 1468 aa23.02■■□□□ 1.28
SRRM2-220ENST00000574593 DCAF11Q8TEB1 546 aa23.02■■□□□ 1.28
SRRM2-220ENST00000574593 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
SRRM2-220ENST00000574593 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
SRRM2-220ENST00000574593 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
SRRM2-220ENST00000574593 CDC42BPGQ6DT37 1551 aa23■■□□□ 1.27
SRRM2-220ENST00000574593 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
SRRM2-220ENST00000574593 NHSL1Q5SYE7 1610 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms