RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 FOXD1Q16676 465 aa41.44■■■■■ 4.22
SCARF1-207ENST00000573867 IQSEC2Q5JU85 1478 aa41.44■■■■■ 4.22
SCARF1-207ENST00000573867 CPS1P31327 1500 aa41.42■■■■■ 4.22
SCARF1-207ENST00000573867 MPHOSPH9Q99550 1183 aa41.41■■■■■ 4.22
SCARF1-207ENST00000573867 SENP3Q9H4L4 574 aaPredicted RBP41.38■■■■■ 4.21
SCARF1-207ENST00000573867 PLEKHG1Q9ULL1 1385 aa41.37■■■■■ 4.21
SCARF1-207ENST00000573867 NUTM2DQ5VT03 806 aaPredicted RBP41.37■■■■■ 4.21
SCARF1-207ENST00000573867 SLC26A8Q96RN1 970 aa41.36■■■■■ 4.21
SCARF1-207ENST00000573867 PPP1R15AO75807 674 aaPredicted RBP41.32■■■■■ 4.21
SCARF1-207ENST00000573867 ABCF1Q8NE71 845 aaKnown RBP eCLIP41.32■■■■■ 4.21
SCARF1-207ENST00000573867 HDGFP51858 240 aaKnown RBP41.3■■■■■ 4.2
SCARF1-207ENST00000573867 ACIN1Q9UKV3 1341 aaKnown RBP41.27■■■■■ 4.2
SCARF1-207ENST00000573867 LRRC7Q96NW7 1537 aa41.27■■■■■ 4.2
SCARF1-207ENST00000573867 KIF1BO60333 1816 aa41.27■■■■■ 4.2
SCARF1-207ENST00000573867 ZNF326Q5BKZ1 582 aaKnown RBP41.25■■■■■ 4.19
SCARF1-207ENST00000573867 BCANQ96GW7 911 aa41.25■■■■■ 4.19
SCARF1-207ENST00000573867 NEXMIFQ5QGS0 1516 aa41.24■■■■■ 4.19
SCARF1-207ENST00000573867 ADAMTS13Q76LX8 1427 aa41.24■■■■■ 4.19
SCARF1-207ENST00000573867 NWD1Q149M9 1564 aa41.17■■■■■ 4.18
SCARF1-207ENST00000573867 NRXN3Q9Y4C0 1643 aa41.16■■■■■ 4.18
SCARF1-207ENST00000573867 KCNA6P17658 529 aa41.16■■■■■ 4.18
SCARF1-207ENST00000573867 HRCP23327 699 aa41.16■■■■■ 4.18
SCARF1-207ENST00000573867 CCDC144AA2RUR9 1427 aa41.16■■■■■ 4.18
SCARF1-207ENST00000573867 TBX22Q9Y458 520 aa41.15■■■■■ 4.18
SCARF1-207ENST00000573867 UBAP1LF5GYI3 381 aa41.13■■■■■ 4.17
SCARF1-207ENST00000573867 DIP2AQ14689 1571 aa41.12■■■■■ 4.17
SCARF1-207ENST00000573867 SETBP1Q9Y6X0 1596 aa41.12■■■■■ 4.17
SCARF1-207ENST00000573867 XIRP1Q702N8 1843 aaKnown RBP41.1■■■■■ 4.17
SCARF1-207ENST00000573867 SPATA31E1Q6ZUB1 1445 aa41.09■■■■■ 4.17
SCARF1-207ENST00000573867 ALKQ9UM73 1620 aa41.08■■■■■ 4.17
SCARF1-207ENST00000573867 CHD2O14647 1828 aaKnown RBP41.08■■■■■ 4.17
SCARF1-207ENST00000573867 NKTRP30414 1462 aaKnown RBP41.05■■■■■ 4.16
SCARF1-207ENST00000573867 PPLO60437 1756 aa41.02■■■■■ 4.16
SCARF1-207ENST00000573867 TMEM94Q12767 1356 aa41.01■■■■■ 4.16
SCARF1-207ENST00000573867 RPGRIP1LQ68CZ1 1315 aa41.01■■■■■ 4.16
SCARF1-207ENST00000573867 RBM33Q96EV2 1170 aaKnown RBP41.01■■■■■ 4.16
SCARF1-207ENST00000573867 PTPRUQ92729 1446 aa41.01■■■■■ 4.15
SCARF1-207ENST00000573867 PIK3R4Q99570 1358 aa40.99■■■■■ 4.15
SCARF1-207ENST00000573867 ANKRD30BQ9BXX2 1392 aa40.99■■■■■ 4.15
SCARF1-207ENST00000573867 PROSER2Q86WR7 435 aaPredicted RBP40.98■■■■■ 4.15
SCARF1-207ENST00000573867 RGL3Q3MIN7 710 aa40.97■■■■■ 4.15
SCARF1-207ENST00000573867 VGFO15240 615 aaPredicted RBP40.95■■■■■ 4.15
SCARF1-207ENST00000573867 METP08581 1390 aa40.95■■■■■ 4.15
SCARF1-207ENST00000573867 TOM1O60784 492 aa40.94■■■■■ 4.14
SCARF1-207ENST00000573867 IFT172Q9UG01 1749 aa40.93■■■■■ 4.14
SCARF1-207ENST00000573867 SETD1AO15047 1707 aaKnown RBP40.9■■■■■ 4.14
SCARF1-207ENST00000573867 PIP4K2BP78356 416 aa40.89■■■■■ 4.14
SCARF1-207ENST00000573867 XRN1Q8IZH2 1706 aaKnown RBP40.89■■■■■ 4.14
SCARF1-207ENST00000573867 AMOTL2Q9Y2J4 779 aa40.88■■■■■ 4.13
SCARF1-207ENST00000573867 ADGRF5Q8IZF2 1346 aa40.88■■■■■ 4.13
SCARF1-207ENST00000573867 SCAF1Q9H7N4 1312 aaKnown RBP40.84■■■■■ 4.13
SCARF1-207ENST00000573867 NCOA3Q9Y6Q9 1424 aa40.75■■■■■ 4.11
SCARF1-207ENST00000573867 MSH6P52701 1360 aa40.74■■■■■ 4.11
SCARF1-207ENST00000573867 PIK3C2GO75747 1445 aa40.73■■■■■ 4.11
SCARF1-207ENST00000573867 MYOM2P54296 1465 aa40.7■■■■■ 4.11
SCARF1-207ENST00000573867 NRXN1Q9ULB1 1477 aa40.7■■■■■ 4.11
SCARF1-207ENST00000573867 HSPA1LP34931 641 aa40.69■■■■■ 4.1
SCARF1-207ENST00000573867 TRIM26Q12899 539 aaPredicted RBP40.69■■■■■ 4.1
SCARF1-207ENST00000573867 ASXL1Q8IXJ9 1541 aa40.67■■■■■ 4.1
SCARF1-207ENST00000573867 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.64■■■■■ 4.1
SCARF1-207ENST00000573867 PRAG1Q86YV5 1406 aa40.64■■■■■ 4.1
SCARF1-207ENST00000573867 C14orf37Q86TY3 774 aa40.63■■■■■ 4.09
SCARF1-207ENST00000573867 ROBO2Q9HCK4 1378 aa40.62■■■■■ 4.09
SCARF1-207ENST00000573867 PTCH1Q13635 1447 aa40.62■■■■■ 4.09
SCARF1-207ENST00000573867 DHX57Q6P158 1386 aaKnown RBP40.6■■■■■ 4.09
SCARF1-207ENST00000573867 FAM135BQ49AJ0 1406 aa40.59■■■■■ 4.09
SCARF1-207ENST00000573867 C19orf44Q9H6X5 657 aa40.59■■■■■ 4.09
SCARF1-207ENST00000573867 TMEM132EQ6IEE7 984 aa40.56■■■■■ 4.08
SCARF1-207ENST00000573867 ROBO1Q9Y6N7 1651 aa40.56■■■■■ 4.08
SCARF1-207ENST00000573867 SLAIN2Q9P270 581 aa40.55■■■■■ 4.08
SCARF1-207ENST00000573867 NALCNQ8IZF0 1738 aa40.55■■■■■ 4.08
SCARF1-207ENST00000573867 C14orf93Q9H972 538 aaKnown RBP40.54■■■■■ 4.08
SCARF1-207ENST00000573867 ADGRL3Q9HAR2 1447 aa40.53■■■■■ 4.08
SCARF1-207ENST00000573867 CFAP70Q5T0N1 1121 aa40.53■■■■■ 4.08
SCARF1-207ENST00000573867 DCAF11Q8TEB1 546 aa40.52■■■■■ 4.08
SCARF1-207ENST00000573867 DCCP43146 1447 aa40.5■■■■■ 4.07
SCARF1-207ENST00000573867 LRPPRCP42704 1394 aaKnown RBP40.5■■■■■ 4.07
SCARF1-207ENST00000573867 KDM2AQ9Y2K7 1162 aa40.5■■■■■ 4.07
SCARF1-207ENST00000573867 TECPR2O15040 1411 aa40.5■■■■■ 4.07
SCARF1-207ENST00000573867 CADPS2Q86UW7 1296 aa40.49■■■■■ 4.07
SCARF1-207ENST00000573867 LAMC1P11047 1609 aa40.49■■■■■ 4.07
SCARF1-207ENST00000573867 ATF3P18847 181 aa40.48■■■■■ 4.07
SCARF1-207ENST00000573867 STK26Q9P289 416 aa40.48■■■■■ 4.07
SCARF1-207ENST00000573867 YTHDC2Q9H6S0 1430 aaKnown RBP40.46■■■■■ 4.07
SCARF1-207ENST00000573867 ABCC11Q96J66 1382 aa40.45■■■■■ 4.07
SCARF1-207ENST00000573867 KNDC1Q76NI1 1749 aa40.45■■■■■ 4.07
SCARF1-207ENST00000573867 MST1RQ04912 1400 aa40.42■■■■■ 4.06
SCARF1-207ENST00000573867 ADGRB1O14514 1584 aa40.4■■■■■ 4.06
SCARF1-207ENST00000573867 SIN3AQ96ST3 1273 aa40.39■■■■■ 4.06
SCARF1-207ENST00000573867 PLEKHH1Q9ULM0 1364 aa40.38■■■■■ 4.06
SCARF1-207ENST00000573867 WAPLQ7Z5K2 1190 aa40.38■■■■■ 4.05
SCARF1-207ENST00000573867 STAC3Q96MF2 364 aa40.37■■■■■ 4.05
SCARF1-207ENST00000573867 BRINP3Q76B58 766 aa40.31■■■■■ 4.04
SCARF1-207ENST00000573867 PHLPP1O60346 1717 aa40.27■■■■■ 4.04
SCARF1-207ENST00000573867 SIRT1Q96EB6 747 aa40.26■■■■■ 4.04
SCARF1-207ENST00000573867 CDC42BPGQ6DT37 1551 aa40.26■■■■■ 4.04
SCARF1-207ENST00000573867 C1orf167Q5SNV9 1468 aa40.26■■■■■ 4.03
SCARF1-207ENST00000573867 AHDC1Q5TGY3 1603 aaPredicted RBP40.25■■■■■ 4.03
SCARF1-207ENST00000573867 COL16A1Q07092 1604 aaPredicted RBP40.24■■■■■ 4.03
SCARF1-207ENST00000573867 NEUROD1Q13562 356 aa40.24■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms