RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 FOXD1Q16676 465 aa30.73■■■□□ 2.51
CHMP6-204ENST00000572778 SENP3Q9H4L4 574 aaPredicted RBP30.72■■■□□ 2.51
CHMP6-204ENST00000572778 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.71■■■□□ 2.51
CHMP6-204ENST00000572778 ZFYVE9O95405 1425 aa30.71■■■□□ 2.51
CHMP6-204ENST00000572778 TRPM2O94759 1503 aa30.7■■■□□ 2.51
CHMP6-204ENST00000572778 NUTM2DQ5VT03 806 aaPredicted RBP30.69■■■□□ 2.5
CHMP6-204ENST00000572778 ZNF326Q5BKZ1 582 aaKnown RBP30.68■■■□□ 2.5
CHMP6-204ENST00000572778 SLC26A8Q96RN1 970 aa30.68■■■□□ 2.5
CHMP6-204ENST00000572778 MYO5BQ9ULV0 1848 aa30.66■■■□□ 2.5
CHMP6-204ENST00000572778 CLTCL1P53675 1640 aa30.65■■■□□ 2.5
CHMP6-204ENST00000572778 CPS1P31327 1500 aa30.63■■■□□ 2.49
CHMP6-204ENST00000572778 PLEKHG1Q9ULL1 1385 aa30.63■■■□□ 2.49
CHMP6-204ENST00000572778 IQSEC2Q5JU85 1478 aa30.62■■■□□ 2.49
CHMP6-204ENST00000572778 HRCP23327 699 aa30.57■■■□□ 2.48
CHMP6-204ENST00000572778 CCDC144AA2RUR9 1427 aa30.55■■■□□ 2.48
CHMP6-204ENST00000572778 UBAP1LF5GYI3 381 aa30.52■■■□□ 2.48
CHMP6-204ENST00000572778 KCNA6P17658 529 aa30.52■■■□□ 2.48
CHMP6-204ENST00000572778 TBX22Q9Y458 520 aa30.52■■■□□ 2.48
CHMP6-204ENST00000572778 STRCP1A6NGW2 1772 aa30.5■■■□□ 2.47
CHMP6-204ENST00000572778 KIF1BO60333 1816 aa30.5■■■□□ 2.47
CHMP6-204ENST00000572778 LRRC7Q96NW7 1537 aa30.49■■■□□ 2.47
CHMP6-204ENST00000572778 ADAMTS13Q76LX8 1427 aa30.47■■■□□ 2.47
CHMP6-204ENST00000572778 RPGRIP1LQ68CZ1 1315 aa30.46■■■□□ 2.47
CHMP6-204ENST00000572778 RGL3Q3MIN7 710 aa30.45■■■□□ 2.47
CHMP6-204ENST00000572778 NEXMIFQ5QGS0 1516 aa30.45■■■□□ 2.47
CHMP6-204ENST00000572778 VGFO15240 615 aaPredicted RBP30.44■■■□□ 2.46
CHMP6-204ENST00000572778 PROSER2Q86WR7 435 aaPredicted RBP30.43■■■□□ 2.46
CHMP6-204ENST00000572778 TOM1O60784 492 aa30.41■■■□□ 2.46
CHMP6-204ENST00000572778 RBM33Q96EV2 1170 aaKnown RBP30.39■■■□□ 2.46
CHMP6-204ENST00000572778 DIP2AQ14689 1571 aa30.39■■■□□ 2.46
CHMP6-204ENST00000572778 TMEM94Q12767 1356 aa30.38■■■□□ 2.45
CHMP6-204ENST00000572778 SPATA31E1Q6ZUB1 1445 aa30.38■■■□□ 2.45
CHMP6-204ENST00000572778 SCAF1Q9H7N4 1312 aaKnown RBP30.37■■■□□ 2.45
CHMP6-204ENST00000572778 SETBP1Q9Y6X0 1596 aa30.37■■■□□ 2.45
CHMP6-204ENST00000572778 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
CHMP6-204ENST00000572778 PIK3R4Q99570 1358 aa30.36■■■□□ 2.45
CHMP6-204ENST00000572778 NKTRP30414 1462 aaKnown RBP30.36■■■□□ 2.45
CHMP6-204ENST00000572778 NWD1Q149M9 1564 aa30.36■■■□□ 2.45
CHMP6-204ENST00000572778 ANKRD30BQ9BXX2 1392 aa30.35■■■□□ 2.45
CHMP6-204ENST00000572778 AMOTL2Q9Y2J4 779 aa30.34■■■□□ 2.45
CHMP6-204ENST00000572778 NRXN3Q9Y4C0 1643 aa30.33■■■□□ 2.45
CHMP6-204ENST00000572778 METP08581 1390 aa30.3■■■□□ 2.44
CHMP6-204ENST00000572778 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
CHMP6-204ENST00000572778 CHD2O14647 1828 aaKnown RBP30.3■■■□□ 2.44
CHMP6-204ENST00000572778 PTPRUQ92729 1446 aa30.3■■■□□ 2.44
CHMP6-204ENST00000572778 ADGRF5Q8IZF2 1346 aa30.28■■■□□ 2.44
CHMP6-204ENST00000572778 PPLO60437 1756 aa30.26■■■□□ 2.43
CHMP6-204ENST00000572778 C14orf37Q86TY3 774 aa30.25■■■□□ 2.43
CHMP6-204ENST00000572778 XIRP1Q702N8 1843 aaKnown RBP30.23■■■□□ 2.43
CHMP6-204ENST00000572778 MSH6P52701 1360 aa30.22■■■□□ 2.43
CHMP6-204ENST00000572778 ALKQ9UM73 1620 aa30.21■■■□□ 2.43
CHMP6-204ENST00000572778 NCOA3Q9Y6Q9 1424 aa30.17■■■□□ 2.42
CHMP6-204ENST00000572778 XRN1Q8IZH2 1706 aaKnown RBP30.14■■■□□ 2.42
CHMP6-204ENST00000572778 IFT172Q9UG01 1749 aa30.14■■■□□ 2.42
CHMP6-204ENST00000572778 HSPA1LP34931 641 aa30.13■■■□□ 2.41
CHMP6-204ENST00000572778 C19orf44Q9H6X5 657 aa30.13■■■□□ 2.41
CHMP6-204ENST00000572778 PIK3C2GO75747 1445 aa30.13■■■□□ 2.41
CHMP6-204ENST00000572778 KDM2AQ9Y2K7 1162 aa30.12■■■□□ 2.41
CHMP6-204ENST00000572778 DCAF11Q8TEB1 546 aa30.11■■■□□ 2.41
CHMP6-204ENST00000572778 MYOM2P54296 1465 aa30.1■■■□□ 2.41
CHMP6-204ENST00000572778 SETD1AO15047 1707 aaKnown RBP30.1■■■□□ 2.41
CHMP6-204ENST00000572778 ATF3P18847 181 aa30.09■■■□□ 2.41
CHMP6-204ENST00000572778 TMEM132EQ6IEE7 984 aa30.09■■■□□ 2.41
CHMP6-204ENST00000572778 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
CHMP6-204ENST00000572778 STK26Q9P289 416 aa30.08■■■□□ 2.41
CHMP6-204ENST00000572778 CFAP70Q5T0N1 1121 aa30.07■■■□□ 2.4
CHMP6-204ENST00000572778 CADPS2Q86UW7 1296 aa30.07■■■□□ 2.4
CHMP6-204ENST00000572778 C14orf93Q9H972 538 aaKnown RBP30.07■■■□□ 2.4
CHMP6-204ENST00000572778 ROBO2Q9HCK4 1378 aa30.06■■■□□ 2.4
CHMP6-204ENST00000572778 NRXN1Q9ULB1 1477 aa30.06■■■□□ 2.4
CHMP6-204ENST00000572778 PTCH1Q13635 1447 aa30.05■■■□□ 2.4
CHMP6-204ENST00000572778 FAM135BQ49AJ0 1406 aa30.04■■■□□ 2.4
CHMP6-204ENST00000572778 DHX57Q6P158 1386 aaKnown RBP30.03■■■□□ 2.4
CHMP6-204ENST00000572778 STAC3Q96MF2 364 aa30.02■■■□□ 2.4
CHMP6-204ENST00000572778 LRPPRCP42704 1394 aaKnown RBP30.01■■■□□ 2.39
CHMP6-204ENST00000572778 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.99■■■□□ 2.39
CHMP6-204ENST00000572778 PRAG1Q86YV5 1406 aa29.99■■■□□ 2.39
CHMP6-204ENST00000572778 ADGRL3Q9HAR2 1447 aa29.99■■■□□ 2.39
CHMP6-204ENST00000572778 ASXL1Q8IXJ9 1541 aa29.98■■■□□ 2.39
CHMP6-204ENST00000572778 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
CHMP6-204ENST00000572778 ABCC11Q96J66 1382 aa29.97■■■□□ 2.39
CHMP6-204ENST00000572778 DCCP43146 1447 aa29.96■■■□□ 2.39
CHMP6-204ENST00000572778 YTHDC2Q9H6S0 1430 aaKnown RBP29.96■■■□□ 2.39
CHMP6-204ENST00000572778 NEUROD1Q13562 356 aa29.95■■■□□ 2.39
CHMP6-204ENST00000572778 WAPLQ7Z5K2 1190 aa29.95■■■□□ 2.39
CHMP6-204ENST00000572778 ROBO1Q9Y6N7 1651 aa29.94■■■□□ 2.38
CHMP6-204ENST00000572778 TECPR2O15040 1411 aa29.93■■■□□ 2.38
CHMP6-204ENST00000572778 LAMC1P11047 1609 aa29.92■■■□□ 2.38
CHMP6-204ENST00000572778 NALCNQ8IZF0 1738 aa29.89■■■□□ 2.38
CHMP6-204ENST00000572778 PLEKHH1Q9ULM0 1364 aa29.88■■■□□ 2.37
CHMP6-204ENST00000572778 MST1RQ04912 1400 aa29.88■■■□□ 2.37
CHMP6-204ENST00000572778 BRINP3Q76B58 766 aa29.86■■■□□ 2.37
CHMP6-204ENST00000572778 L3MBTL2Q969R5 705 aa29.86■■■□□ 2.37
CHMP6-204ENST00000572778 SIRT1Q96EB6 747 aa29.86■■■□□ 2.37
CHMP6-204ENST00000572778 PCGF6Q9BYE7 350 aa29.84■■■□□ 2.37
CHMP6-204ENST00000572778 TRAK1Q9UPV9 953 aa29.84■■■□□ 2.37
CHMP6-204ENST00000572778 PRAM1Q96QH2 718 aa29.83■■■□□ 2.37
CHMP6-204ENST00000572778 KNDC1Q76NI1 1749 aa29.82■■■□□ 2.36
CHMP6-204ENST00000572778 ADGRB1O14514 1584 aa29.82■■■□□ 2.36
CHMP6-204ENST00000572778 POGKQ9P215 609 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms