RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
NDE1-205ENST00000572756 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
NDE1-205ENST00000572756 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
NDE1-205ENST00000572756 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
NDE1-205ENST00000572756 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
NDE1-205ENST00000572756 KIF1BO60333 1816 aa24.17■■□□□ 1.46
NDE1-205ENST00000572756 SLC26A8Q96RN1 970 aa24.17■■□□□ 1.46
NDE1-205ENST00000572756 XIRP1Q702N8 1843 aaKnown RBP24.16■■□□□ 1.46
NDE1-205ENST00000572756 NWD1Q149M9 1564 aa24.15■■□□□ 1.46
NDE1-205ENST00000572756 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
NDE1-205ENST00000572756 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
NDE1-205ENST00000572756 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
NDE1-205ENST00000572756 ADAMTS13Q76LX8 1427 aa24.12■■□□□ 1.45
NDE1-205ENST00000572756 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
NDE1-205ENST00000572756 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
NDE1-205ENST00000572756 KCNA6P17658 529 aa24.11■■□□□ 1.45
NDE1-205ENST00000572756 NUTM2DQ5VT03 806 aaPredicted RBP24.11■■□□□ 1.45
NDE1-205ENST00000572756 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
NDE1-205ENST00000572756 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
NDE1-205ENST00000572756 MPHOSPH9Q99550 1183 aa24.1■■□□□ 1.45
NDE1-205ENST00000572756 RAB3GAP2Q9H2M9 1393 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 BCANQ96GW7 911 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
NDE1-205ENST00000572756 NKTRP30414 1462 aaKnown RBP24.08■■□□□ 1.45
NDE1-205ENST00000572756 FOXD1Q16676 465 aa24.08■■□□□ 1.45
NDE1-205ENST00000572756 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
NDE1-205ENST00000572756 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
NDE1-205ENST00000572756 TOM1O60784 492 aa24.06■■□□□ 1.44
NDE1-205ENST00000572756 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
NDE1-205ENST00000572756 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
NDE1-205ENST00000572756 TMEM94Q12767 1356 aa24.02■■□□□ 1.44
NDE1-205ENST00000572756 PPLO60437 1756 aa24.01■■□□□ 1.43
NDE1-205ENST00000572756 CCDC144AA2RUR9 1427 aa24■■□□□ 1.43
NDE1-205ENST00000572756 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
NDE1-205ENST00000572756 HRCP23327 699 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 PIP4K2BP78356 416 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
NDE1-205ENST00000572756 XRN1Q8IZH2 1706 aaKnown RBP23.96■■□□□ 1.43
NDE1-205ENST00000572756 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
NDE1-205ENST00000572756 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
NDE1-205ENST00000572756 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
NDE1-205ENST00000572756 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
NDE1-205ENST00000572756 METP08581 1390 aa23.92■■□□□ 1.42
NDE1-205ENST00000572756 VGFO15240 615 aaPredicted RBP23.92■■□□□ 1.42
NDE1-205ENST00000572756 NCOA3Q9Y6Q9 1424 aa23.92■■□□□ 1.42
NDE1-205ENST00000572756 AMOTL2Q9Y2J4 779 aa23.9■■□□□ 1.42
NDE1-205ENST00000572756 HSPA1LP34931 641 aa23.88■■□□□ 1.41
NDE1-205ENST00000572756 MSH6P52701 1360 aa23.87■■□□□ 1.41
NDE1-205ENST00000572756 ANKRD30BQ9BXX2 1392 aa23.87■■□□□ 1.41
NDE1-205ENST00000572756 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
NDE1-205ENST00000572756 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
NDE1-205ENST00000572756 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
NDE1-205ENST00000572756 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
NDE1-205ENST00000572756 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
NDE1-205ENST00000572756 PRAG1Q86YV5 1406 aa23.81■■□□□ 1.4
NDE1-205ENST00000572756 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
NDE1-205ENST00000572756 C19orf44Q9H6X5 657 aa23.78■■□□□ 1.4
NDE1-205ENST00000572756 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
NDE1-205ENST00000572756 MYOM2P54296 1465 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 DCCP43146 1447 aa23.76■■□□□ 1.39
NDE1-205ENST00000572756 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
NDE1-205ENST00000572756 NALCNQ8IZF0 1738 aa23.75■■□□□ 1.39
NDE1-205ENST00000572756 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
NDE1-205ENST00000572756 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ROBO2Q9HCK4 1378 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ADGRL3Q9HAR2 1447 aa23.73■■□□□ 1.39
NDE1-205ENST00000572756 ATF3P18847 181 aa23.7■■□□□ 1.38
NDE1-205ENST00000572756 KNDC1Q76NI1 1749 aa23.69■■□□□ 1.38
NDE1-205ENST00000572756 LAMC1P11047 1609 aa23.69■■□□□ 1.38
NDE1-205ENST00000572756 TECPR2O15040 1411 aa23.68■■□□□ 1.38
NDE1-205ENST00000572756 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
NDE1-205ENST00000572756 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
NDE1-205ENST00000572756 MST1RQ04912 1400 aa23.67■■□□□ 1.38
NDE1-205ENST00000572756 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
NDE1-205ENST00000572756 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
NDE1-205ENST00000572756 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
NDE1-205ENST00000572756 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
NDE1-205ENST00000572756 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
NDE1-205ENST00000572756 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
NDE1-205ENST00000572756 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
NDE1-205ENST00000572756 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
NDE1-205ENST00000572756 COL16A1Q07092 1604 aaPredicted RBP23.62■■□□□ 1.37
NDE1-205ENST00000572756 CFAP70Q5T0N1 1121 aa23.61■■□□□ 1.37
NDE1-205ENST00000572756 BRINP3Q76B58 766 aa23.6■■□□□ 1.37
NDE1-205ENST00000572756 DCAF11Q8TEB1 546 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 STK26Q9P289 416 aa23.59■■□□□ 1.37
NDE1-205ENST00000572756 ADGRB1O14514 1584 aa23.58■■□□□ 1.37
NDE1-205ENST00000572756 CDC42BPGQ6DT37 1551 aa23.57■■□□□ 1.36
NDE1-205ENST00000572756 NHSL1Q5SYE7 1610 aa23.57■■□□□ 1.36
NDE1-205ENST00000572756 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
NDE1-205ENST00000572756 PLEKHH1Q9ULM0 1364 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 SIRT1Q96EB6 747 aa23.55■■□□□ 1.36
NDE1-205ENST00000572756 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms