RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
TRIM25-205ENST00000572021 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
TRIM25-205ENST00000572021 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
TRIM25-205ENST00000572021 MED14O60244 1454 aa17.54■□□□□ 0.4
TRIM25-205ENST00000572021 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
TRIM25-205ENST00000572021 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
TRIM25-205ENST00000572021 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.39
TRIM25-205ENST00000572021 BCANQ96GW7 911 aa17.5■□□□□ 0.39
TRIM25-205ENST00000572021 ANKRD30BQ9BXX2 1392 aa17.5■□□□□ 0.39
TRIM25-205ENST00000572021 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
TRIM25-205ENST00000572021 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
TRIM25-205ENST00000572021 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
TRIM25-205ENST00000572021 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRIM25-205ENST00000572021 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
TRIM25-205ENST00000572021 PLEKHG1Q9ULL1 1385 aa17.46■□□□□ 0.39
TRIM25-205ENST00000572021 SPATA31E1Q6ZUB1 1445 aa17.46■□□□□ 0.38
TRIM25-205ENST00000572021 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
TRIM25-205ENST00000572021 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
TRIM25-205ENST00000572021 PPLO60437 1756 aa17.44■□□□□ 0.38
TRIM25-205ENST00000572021 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
TRIM25-205ENST00000572021 NRXN3Q9Y4C0 1643 aa17.41■□□□□ 0.38
TRIM25-205ENST00000572021 ADAMTS13Q76LX8 1427 aa17.41■□□□□ 0.38
TRIM25-205ENST00000572021 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
TRIM25-205ENST00000572021 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
TRIM25-205ENST00000572021 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
TRIM25-205ENST00000572021 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
TRIM25-205ENST00000572021 SETBP1Q9Y6X0 1596 aa17.37■□□□□ 0.37
TRIM25-205ENST00000572021 VGFO15240 615 aaPredicted RBP17.37■□□□□ 0.37
TRIM25-205ENST00000572021 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
TRIM25-205ENST00000572021 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
TRIM25-205ENST00000572021 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
TRIM25-205ENST00000572021 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
TRIM25-205ENST00000572021 CHD2O14647 1828 aaKnown RBP17.34■□□□□ 0.37
TRIM25-205ENST00000572021 CPS1P31327 1500 aa17.34■□□□□ 0.37
TRIM25-205ENST00000572021 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
TRIM25-205ENST00000572021 METP08581 1390 aa17.33■□□□□ 0.37
TRIM25-205ENST00000572021 KCNA6P17658 529 aa17.33■□□□□ 0.37
TRIM25-205ENST00000572021 NEUROD1Q13562 356 aa17.33■□□□□ 0.37
TRIM25-205ENST00000572021 ALKQ9UM73 1620 aa17.32■□□□□ 0.36
TRIM25-205ENST00000572021 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
TRIM25-205ENST00000572021 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
TRIM25-205ENST00000572021 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
TRIM25-205ENST00000572021 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
TRIM25-205ENST00000572021 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
TRIM25-205ENST00000572021 XIRP1Q702N8 1843 aaKnown RBP17.3■□□□□ 0.36
TRIM25-205ENST00000572021 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
TRIM25-205ENST00000572021 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
TRIM25-205ENST00000572021 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
TRIM25-205ENST00000572021 MYOM2P54296 1465 aa17.28■□□□□ 0.36
TRIM25-205ENST00000572021 TMEM94Q12767 1356 aa17.26■□□□□ 0.35
TRIM25-205ENST00000572021 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
TRIM25-205ENST00000572021 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
TRIM25-205ENST00000572021 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
TRIM25-205ENST00000572021 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
TRIM25-205ENST00000572021 NKTRP30414 1462 aaKnown RBP17.26■□□□□ 0.35
TRIM25-205ENST00000572021 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
TRIM25-205ENST00000572021 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
TRIM25-205ENST00000572021 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
TRIM25-205ENST00000572021 ASXL1Q8IXJ9 1541 aa17.24■□□□□ 0.35
TRIM25-205ENST00000572021 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
TRIM25-205ENST00000572021 FBXO41Q8TF61 875 aa17.23■□□□□ 0.35
TRIM25-205ENST00000572021 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
TRIM25-205ENST00000572021 STK26Q9P289 416 aa17.23■□□□□ 0.35
TRIM25-205ENST00000572021 C14orf93Q9H972 538 aaKnown RBP17.22■□□□□ 0.35
TRIM25-205ENST00000572021 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
TRIM25-205ENST00000572021 LAMC1P11047 1609 aa17.19■□□□□ 0.34
TRIM25-205ENST00000572021 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
TRIM25-205ENST00000572021 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
TRIM25-205ENST00000572021 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
TRIM25-205ENST00000572021 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
TRIM25-205ENST00000572021 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
TRIM25-205ENST00000572021 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
TRIM25-205ENST00000572021 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
TRIM25-205ENST00000572021 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
TRIM25-205ENST00000572021 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
TRIM25-205ENST00000572021 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
TRIM25-205ENST00000572021 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
TRIM25-205ENST00000572021 TOM1O60784 492 aa17.15■□□□□ 0.34
TRIM25-205ENST00000572021 MSH6P52701 1360 aa17.14■□□□□ 0.34
TRIM25-205ENST00000572021 TONSLQ96HA7 1378 aa17.14■□□□□ 0.34
TRIM25-205ENST00000572021 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
TRIM25-205ENST00000572021 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
TRIM25-205ENST00000572021 PTCH1Q13635 1447 aa17.14■□□□□ 0.33
TRIM25-205ENST00000572021 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
TRIM25-205ENST00000572021 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
TRIM25-205ENST00000572021 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
TRIM25-205ENST00000572021 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
TRIM25-205ENST00000572021 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
TRIM25-205ENST00000572021 TECPR2O15040 1411 aa17.11■□□□□ 0.33
TRIM25-205ENST00000572021 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
TRIM25-205ENST00000572021 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM25-205ENST00000572021 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
TRIM25-205ENST00000572021 C19orf44Q9H6X5 657 aa17.11■□□□□ 0.33
TRIM25-205ENST00000572021 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
TRIM25-205ENST00000572021 ADGRL3Q9HAR2 1447 aa17.09■□□□□ 0.33
TRIM25-205ENST00000572021 ATF3P18847 181 aa17.09■□□□□ 0.33
TRIM25-205ENST00000572021 PRAM1Q96QH2 718 aa17.08■□□□□ 0.32
TRIM25-205ENST00000572021 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
TRIM25-205ENST00000572021 SLAIN2Q9P270 581 aa17.06■□□□□ 0.32
TRIM25-205ENST00000572021 POGKQ9P215 609 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms