RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
LITAF-210ENST00000571976 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
LITAF-210ENST00000571976 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
LITAF-210ENST00000571976 ZNF326Q5BKZ1 582 aaKnown RBP23.84■■□□□ 1.41
LITAF-210ENST00000571976 KIF1BO60333 1816 aa23.83■■□□□ 1.41
LITAF-210ENST00000571976 ZNF335Q9H4Z2 1342 aaPredicted RBP23.82■■□□□ 1.4
LITAF-210ENST00000571976 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
LITAF-210ENST00000571976 BCANQ96GW7 911 aa23.79■■□□□ 1.4
LITAF-210ENST00000571976 LTBP4Q8N2S1 1624 aa23.78■■□□□ 1.4
LITAF-210ENST00000571976 CERKQ8TCT0 537 aa23.78■■□□□ 1.4
LITAF-210ENST00000571976 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
LITAF-210ENST00000571976 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
LITAF-210ENST00000571976 ANKRD30BQ9BXX2 1392 aa23.76■■□□□ 1.39
LITAF-210ENST00000571976 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
LITAF-210ENST00000571976 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
LITAF-210ENST00000571976 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
LITAF-210ENST00000571976 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
LITAF-210ENST00000571976 RGL3Q3MIN7 710 aa23.7■■□□□ 1.38
LITAF-210ENST00000571976 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
LITAF-210ENST00000571976 TBX22Q9Y458 520 aa23.7■■□□□ 1.38
LITAF-210ENST00000571976 CPS1P31327 1500 aa23.69■■□□□ 1.38
LITAF-210ENST00000571976 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
LITAF-210ENST00000571976 IQSEC2Q5JU85 1478 aa23.65■■□□□ 1.38
LITAF-210ENST00000571976 KCNA6P17658 529 aa23.65■■□□□ 1.38
LITAF-210ENST00000571976 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
LITAF-210ENST00000571976 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
LITAF-210ENST00000571976 PPLO60437 1756 aa23.63■■□□□ 1.37
LITAF-210ENST00000571976 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
LITAF-210ENST00000571976 PIK3R4Q99570 1358 aa23.62■■□□□ 1.37
LITAF-210ENST00000571976 NRXN3Q9Y4C0 1643 aa23.6■■□□□ 1.37
LITAF-210ENST00000571976 FBXO41Q8TF61 875 aa23.6■■□□□ 1.37
LITAF-210ENST00000571976 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
LITAF-210ENST00000571976 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
LITAF-210ENST00000571976 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
LITAF-210ENST00000571976 PCGF6Q9BYE7 350 aa23.57■■□□□ 1.36
LITAF-210ENST00000571976 ADGRF5Q8IZF2 1346 aa23.57■■□□□ 1.36
LITAF-210ENST00000571976 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
LITAF-210ENST00000571976 CHD2O14647 1828 aaKnown RBP23.56■■□□□ 1.36
LITAF-210ENST00000571976 NKTRP30414 1462 aaKnown RBP23.55■■□□□ 1.36
LITAF-210ENST00000571976 PROSER2Q86WR7 435 aaPredicted RBP23.54■■□□□ 1.36
LITAF-210ENST00000571976 METP08581 1390 aa23.53■■□□□ 1.36
LITAF-210ENST00000571976 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
LITAF-210ENST00000571976 AMOTL2Q9Y2J4 779 aa23.53■■□□□ 1.36
LITAF-210ENST00000571976 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
LITAF-210ENST00000571976 MYOM2P54296 1465 aa23.51■■□□□ 1.35
LITAF-210ENST00000571976 ILDR1Q86SU0 546 aaPredicted RBP23.51■■□□□ 1.35
LITAF-210ENST00000571976 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
LITAF-210ENST00000571976 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
LITAF-210ENST00000571976 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
LITAF-210ENST00000571976 TMEM94Q12767 1356 aa23.49■■□□□ 1.35
LITAF-210ENST00000571976 NRXN1Q9ULB1 1477 aa23.48■■□□□ 1.35
LITAF-210ENST00000571976 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
LITAF-210ENST00000571976 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
LITAF-210ENST00000571976 TOM1O60784 492 aa23.46■■□□□ 1.35
LITAF-210ENST00000571976 KDM2AQ9Y2K7 1162 aa23.46■■□□□ 1.35
LITAF-210ENST00000571976 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.34
LITAF-210ENST00000571976 SIN3AQ96ST3 1273 aa23.45■■□□□ 1.34
LITAF-210ENST00000571976 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
LITAF-210ENST00000571976 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
LITAF-210ENST00000571976 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
LITAF-210ENST00000571976 XRN1Q8IZH2 1706 aaKnown RBP23.44■■□□□ 1.34
LITAF-210ENST00000571976 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
LITAF-210ENST00000571976 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
LITAF-210ENST00000571976 MSH6P52701 1360 aa23.4■■□□□ 1.34
LITAF-210ENST00000571976 LAMC1P11047 1609 aa23.39■■□□□ 1.33
LITAF-210ENST00000571976 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
LITAF-210ENST00000571976 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
LITAF-210ENST00000571976 PRAG1Q86YV5 1406 aa23.38■■□□□ 1.33
LITAF-210ENST00000571976 PTCH1Q13635 1447 aa23.37■■□□□ 1.33
LITAF-210ENST00000571976 L3MBTL2Q969R5 705 aa23.36■■□□□ 1.33
LITAF-210ENST00000571976 C19orf44Q9H6X5 657 aa23.36■■□□□ 1.33
LITAF-210ENST00000571976 LRPPRCP42704 1394 aaKnown RBP23.36■■□□□ 1.33
LITAF-210ENST00000571976 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
LITAF-210ENST00000571976 PIP4K2BP78356 416 aa23.35■■□□□ 1.33
LITAF-210ENST00000571976 ABCC11Q96J66 1382 aa23.35■■□□□ 1.33
LITAF-210ENST00000571976 STK26Q9P289 416 aa23.34■■□□□ 1.33
LITAF-210ENST00000571976 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
LITAF-210ENST00000571976 TECPR2O15040 1411 aa23.33■■□□□ 1.32
LITAF-210ENST00000571976 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.32
LITAF-210ENST00000571976 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.32
LITAF-210ENST00000571976 ATF3P18847 181 aa23.3■■□□□ 1.32
LITAF-210ENST00000571976 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
LITAF-210ENST00000571976 SIRT1Q96EB6 747 aa23.29■■□□□ 1.32
LITAF-210ENST00000571976 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
LITAF-210ENST00000571976 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
LITAF-210ENST00000571976 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
LITAF-210ENST00000571976 DCCP43146 1447 aa23.27■■□□□ 1.32
LITAF-210ENST00000571976 ADGRL3Q9HAR2 1447 aa23.27■■□□□ 1.32
LITAF-210ENST00000571976 SLAIN2Q9P270 581 aa23.27■■□□□ 1.32
LITAF-210ENST00000571976 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
LITAF-210ENST00000571976 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
LITAF-210ENST00000571976 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
LITAF-210ENST00000571976 WAPLQ7Z5K2 1190 aa23.25■■□□□ 1.31
LITAF-210ENST00000571976 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
LITAF-210ENST00000571976 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
LITAF-210ENST00000571976 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
LITAF-210ENST00000571976 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
LITAF-210ENST00000571976 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.3
LITAF-210ENST00000571976 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
LITAF-210ENST00000571976 NBPF1Q3BBV0 1214 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms