RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.04
GTF3C1-213ENST00000571886 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.04
GTF3C1-213ENST00000571886 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
GTF3C1-213ENST00000571886 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
GTF3C1-213ENST00000571886 TRPM2O94759 1503 aa15.29■□□□□ 0.04
GTF3C1-213ENST00000571886 CPS1P31327 1500 aa15.29■□□□□ 0.04
GTF3C1-213ENST00000571886 RAB3GAP2Q9H2M9 1393 aa15.29■□□□□ 0.04
GTF3C1-213ENST00000571886 BCANQ96GW7 911 aa15.28■□□□□ 0.04
GTF3C1-213ENST00000571886 PLEKHG1Q9ULL1 1385 aa15.27■□□□□ 0.04
GTF3C1-213ENST00000571886 PPP1R15AO75807 674 aaPredicted RBP15.27■□□□□ 0.04
GTF3C1-213ENST00000571886 LRRC7Q96NW7 1537 aa15.27■□□□□ 0.03
GTF3C1-213ENST00000571886 UBAP1LF5GYI3 381 aa15.26■□□□□ 0.03
GTF3C1-213ENST00000571886 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-213ENST00000571886 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
GTF3C1-213ENST00000571886 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.26■□□□□ 0.03
GTF3C1-213ENST00000571886 KIF1BO60333 1816 aa15.26■□□□□ 0.03
GTF3C1-213ENST00000571886 ADAMTS13Q76LX8 1427 aa15.25■□□□□ 0.03
GTF3C1-213ENST00000571886 XIRP1Q702N8 1843 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-213ENST00000571886 KCNA6P17658 529 aa15.24■□□□□ 0.03
GTF3C1-213ENST00000571886 RBM33Q96EV2 1170 aaKnown RBP15.24■□□□□ 0.03
GTF3C1-213ENST00000571886 TBX22Q9Y458 520 aa15.23■□□□□ 0.03
GTF3C1-213ENST00000571886 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
GTF3C1-213ENST00000571886 ALKQ9UM73 1620 aa15.22■□□□□ 0.03
GTF3C1-213ENST00000571886 CHD2O14647 1828 aaKnown RBP15.22■□□□□ 0.03
GTF3C1-213ENST00000571886 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.02
GTF3C1-213ENST00000571886 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-213ENST00000571886 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
GTF3C1-213ENST00000571886 PTPRUQ92729 1446 aa15.18■□□□□ 0.02
GTF3C1-213ENST00000571886 PIP4K2BP78356 416 aa15.18■□□□□ 0.02
GTF3C1-213ENST00000571886 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
GTF3C1-213ENST00000571886 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
GTF3C1-213ENST00000571886 TOM1O60784 492 aa15.17■□□□□ 0.02
GTF3C1-213ENST00000571886 HRCP23327 699 aa15.17■□□□□ 0.02
GTF3C1-213ENST00000571886 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
GTF3C1-213ENST00000571886 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-213ENST00000571886 SETBP1Q9Y6X0 1596 aa15.16■□□□□ 0.02
GTF3C1-213ENST00000571886 SPATA31E1Q6ZUB1 1445 aa15.16■□□□□ 0.02
GTF3C1-213ENST00000571886 PPLO60437 1756 aa15.16■□□□□ 0.02
GTF3C1-213ENST00000571886 METP08581 1390 aa15.15■□□□□ 0.02
GTF3C1-213ENST00000571886 DIP2AQ14689 1571 aa15.15■□□□□ 0.02
GTF3C1-213ENST00000571886 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-213ENST00000571886 AMOTL2Q9Y2J4 779 aa15.14■□□□□ 0.01
GTF3C1-213ENST00000571886 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
GTF3C1-213ENST00000571886 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
GTF3C1-213ENST00000571886 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
GTF3C1-213ENST00000571886 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
GTF3C1-213ENST00000571886 PIK3R4Q99570 1358 aa15.12■□□□□ 0.01
GTF3C1-213ENST00000571886 ANKRD30BQ9BXX2 1392 aa15.12■□□□□ 0.01
GTF3C1-213ENST00000571886 HSPA1LP34931 641 aa15.11■□□□□ 0.01
GTF3C1-213ENST00000571886 SETD1AO15047 1707 aaKnown RBP15.11■□□□□ 0.01
GTF3C1-213ENST00000571886 IFT172Q9UG01 1749 aa15.11■□□□□ 0.01
GTF3C1-213ENST00000571886 XRN1Q8IZH2 1706 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-213ENST00000571886 MSH6P52701 1360 aa15.05■□□□□ -0
GTF3C1-213ENST00000571886 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
GTF3C1-213ENST00000571886 NCOA3Q9Y6Q9 1424 aa15.04■□□□□ -0
GTF3C1-213ENST00000571886 C14orf37Q86TY3 774 aa15.04■□□□□ -0
GTF3C1-213ENST00000571886 TMEM132EQ6IEE7 984 aa15.03■□□□□ -0
GTF3C1-213ENST00000571886 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
GTF3C1-213ENST00000571886 C19orf44Q9H6X5 657 aa15.02■□□□□ -0
GTF3C1-213ENST00000571886 SLAIN2Q9P270 581 aa15.02■□□□□ -0
GTF3C1-213ENST00000571886 PIK3C2GO75747 1445 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 FAM135BQ49AJ0 1406 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 ROBO1Q9Y6N7 1651 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 ASXL1Q8IXJ9 1541 aa15.01□□□□□ -0.01
GTF3C1-213ENST00000571886 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
GTF3C1-213ENST00000571886 STK26Q9P289 416 aa15□□□□□ -0.01
GTF3C1-213ENST00000571886 NRXN1Q9ULB1 1477 aa15□□□□□ -0.01
GTF3C1-213ENST00000571886 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-213ENST00000571886 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-213ENST00000571886 DCAF11Q8TEB1 546 aa14.99□□□□□ -0.01
GTF3C1-213ENST00000571886 MYOM2P54296 1465 aa14.98□□□□□ -0.01
GTF3C1-213ENST00000571886 ATF3P18847 181 aa14.98□□□□□ -0.01
GTF3C1-213ENST00000571886 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
GTF3C1-213ENST00000571886 WAPLQ7Z5K2 1190 aa14.97□□□□□ -0.01
GTF3C1-213ENST00000571886 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
GTF3C1-213ENST00000571886 PTCH1Q13635 1447 aa14.97□□□□□ -0.01
GTF3C1-213ENST00000571886 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
GTF3C1-213ENST00000571886 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
GTF3C1-213ENST00000571886 LRPPRCP42704 1394 aaKnown RBP14.96□□□□□ -0.02
GTF3C1-213ENST00000571886 ADGRL3Q9HAR2 1447 aa14.95□□□□□ -0.02
GTF3C1-213ENST00000571886 PLEKHH1Q9ULM0 1364 aa14.95□□□□□ -0.02
GTF3C1-213ENST00000571886 MST1RQ04912 1400 aa14.94□□□□□ -0.02
GTF3C1-213ENST00000571886 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-213ENST00000571886 BRINP3Q76B58 766 aa14.93□□□□□ -0.02
GTF3C1-213ENST00000571886 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
GTF3C1-213ENST00000571886 DCCP43146 1447 aa14.92□□□□□ -0.02
GTF3C1-213ENST00000571886 DISP3Q9P2K9 1392 aa14.92□□□□□ -0.02
GTF3C1-213ENST00000571886 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
GTF3C1-213ENST00000571886 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
GTF3C1-213ENST00000571886 TECPR2O15040 1411 aa14.92□□□□□ -0.02
GTF3C1-213ENST00000571886 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
GTF3C1-213ENST00000571886 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
GTF3C1-213ENST00000571886 LAMC1P11047 1609 aa14.89□□□□□ -0.03
GTF3C1-213ENST00000571886 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
GTF3C1-213ENST00000571886 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-213ENST00000571886 C1orf167Q5SNV9 1468 aa14.89□□□□□ -0.03
GTF3C1-213ENST00000571886 SIRT1Q96EB6 747 aa14.88□□□□□ -0.03
GTF3C1-213ENST00000571886 ORAI2Q96SN7 254 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms