RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
TRAPPC1-203ENST00000571739 ZNF326Q5BKZ1 582 aaKnown RBP12.84□□□□□ -0.35
TRAPPC1-203ENST00000571739 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
TRAPPC1-203ENST00000571739 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC1-203ENST00000571739 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC1-203ENST00000571739 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
TRAPPC1-203ENST00000571739 ANKRD30BQ9BXX2 1392 aa12.82□□□□□ -0.36
TRAPPC1-203ENST00000571739 LTBP4Q8N2S1 1624 aa12.82□□□□□ -0.36
TRAPPC1-203ENST00000571739 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
TRAPPC1-203ENST00000571739 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC1-203ENST00000571739 BCANQ96GW7 911 aa12.8□□□□□ -0.36
TRAPPC1-203ENST00000571739 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
TRAPPC1-203ENST00000571739 IQGAP1P46940 1657 aa12.8□□□□□ -0.36
TRAPPC1-203ENST00000571739 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
TRAPPC1-203ENST00000571739 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
TRAPPC1-203ENST00000571739 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
TRAPPC1-203ENST00000571739 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
TRAPPC1-203ENST00000571739 KIF1BO60333 1816 aa12.77□□□□□ -0.37
TRAPPC1-203ENST00000571739 KCNA6P17658 529 aa12.77□□□□□ -0.37
TRAPPC1-203ENST00000571739 ADAMTS13Q76LX8 1427 aa12.77□□□□□ -0.37
TRAPPC1-203ENST00000571739 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC1-203ENST00000571739 NEXMIFQ5QGS0 1516 aa12.76□□□□□ -0.37
TRAPPC1-203ENST00000571739 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
TRAPPC1-203ENST00000571739 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
TRAPPC1-203ENST00000571739 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
TRAPPC1-203ENST00000571739 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC1-203ENST00000571739 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-203ENST00000571739 FBXO41Q8TF61 875 aa12.72□□□□□ -0.37
TRAPPC1-203ENST00000571739 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-203ENST00000571739 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
TRAPPC1-203ENST00000571739 METP08581 1390 aa12.71□□□□□ -0.37
TRAPPC1-203ENST00000571739 CPS1P31327 1500 aa12.71□□□□□ -0.38
TRAPPC1-203ENST00000571739 PTPRUQ92729 1446 aa12.71□□□□□ -0.38
TRAPPC1-203ENST00000571739 NRXN3Q9Y4C0 1643 aa12.7□□□□□ -0.38
TRAPPC1-203ENST00000571739 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC1-203ENST00000571739 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
TRAPPC1-203ENST00000571739 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
TRAPPC1-203ENST00000571739 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
TRAPPC1-203ENST00000571739 PPLO60437 1756 aa12.69□□□□□ -0.38
TRAPPC1-203ENST00000571739 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
TRAPPC1-203ENST00000571739 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
TRAPPC1-203ENST00000571739 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
TRAPPC1-203ENST00000571739 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-203ENST00000571739 IQSEC2Q5JU85 1478 aa12.67□□□□□ -0.38
TRAPPC1-203ENST00000571739 C14orf93Q9H972 538 aaKnown RBP12.67□□□□□ -0.38
TRAPPC1-203ENST00000571739 TMEM94Q12767 1356 aa12.67□□□□□ -0.38
TRAPPC1-203ENST00000571739 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
TRAPPC1-203ENST00000571739 CFAP70Q5T0N1 1121 aa12.66□□□□□ -0.38
TRAPPC1-203ENST00000571739 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
TRAPPC1-203ENST00000571739 ALKQ9UM73 1620 aa12.66□□□□□ -0.38
TRAPPC1-203ENST00000571739 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
TRAPPC1-203ENST00000571739 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
TRAPPC1-203ENST00000571739 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
TRAPPC1-203ENST00000571739 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
TRAPPC1-203ENST00000571739 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
TRAPPC1-203ENST00000571739 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
TRAPPC1-203ENST00000571739 NWD1Q149M9 1564 aa12.64□□□□□ -0.39
TRAPPC1-203ENST00000571739 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
TRAPPC1-203ENST00000571739 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
TRAPPC1-203ENST00000571739 TOM1O60784 492 aa12.63□□□□□ -0.39
TRAPPC1-203ENST00000571739 MYOM2P54296 1465 aa12.62□□□□□ -0.39
TRAPPC1-203ENST00000571739 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
TRAPPC1-203ENST00000571739 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
TRAPPC1-203ENST00000571739 STK26Q9P289 416 aa12.6□□□□□ -0.39
TRAPPC1-203ENST00000571739 NCOA3Q9Y6Q9 1424 aa12.6□□□□□ -0.39
TRAPPC1-203ENST00000571739 ROBO2Q9HCK4 1378 aa12.59□□□□□ -0.39
TRAPPC1-203ENST00000571739 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
TRAPPC1-203ENST00000571739 WAPLQ7Z5K2 1190 aa12.59□□□□□ -0.39
TRAPPC1-203ENST00000571739 C19orf44Q9H6X5 657 aa12.59□□□□□ -0.39
TRAPPC1-203ENST00000571739 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
TRAPPC1-203ENST00000571739 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.4
TRAPPC1-203ENST00000571739 ASXL1Q8IXJ9 1541 aa12.57□□□□□ -0.4
TRAPPC1-203ENST00000571739 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
TRAPPC1-203ENST00000571739 NBPF1Q3BBV0 1214 aa12.57□□□□□ -0.4
TRAPPC1-203ENST00000571739 C14orf37Q86TY3 774 aa12.57□□□□□ -0.4
TRAPPC1-203ENST00000571739 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
TRAPPC1-203ENST00000571739 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
TRAPPC1-203ENST00000571739 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
TRAPPC1-203ENST00000571739 MSH6P52701 1360 aa12.56□□□□□ -0.4
TRAPPC1-203ENST00000571739 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
TRAPPC1-203ENST00000571739 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
TRAPPC1-203ENST00000571739 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
TRAPPC1-203ENST00000571739 TECPR2O15040 1411 aa12.54□□□□□ -0.4
TRAPPC1-203ENST00000571739 TRAK1Q9UPV9 953 aa12.54□□□□□ -0.4
TRAPPC1-203ENST00000571739 SCAF1Q9H7N4 1312 aaKnown RBP12.54□□□□□ -0.4
TRAPPC1-203ENST00000571739 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
TRAPPC1-203ENST00000571739 ADGRB1O14514 1584 aa12.53□□□□□ -0.4
TRAPPC1-203ENST00000571739 ATF3P18847 181 aa12.53□□□□□ -0.4
TRAPPC1-203ENST00000571739 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
TRAPPC1-203ENST00000571739 HSPA1LP34931 641 aa12.52□□□□□ -0.41
TRAPPC1-203ENST00000571739 FAM135BQ49AJ0 1406 aa12.52□□□□□ -0.41
TRAPPC1-203ENST00000571739 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-203ENST00000571739 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
TRAPPC1-203ENST00000571739 SAFB2Q14151 953 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRAPPC1-203ENST00000571739 ADGRL3Q9HAR2 1447 aa12.5□□□□□ -0.41
TRAPPC1-203ENST00000571739 LAMC1P11047 1609 aa12.49□□□□□ -0.41
TRAPPC1-203ENST00000571739 TONSLQ96HA7 1378 aa12.49□□□□□ -0.41
TRAPPC1-203ENST00000571739 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
TRAPPC1-203ENST00000571739 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-203ENST00000571739 POGKQ9P215 609 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms