RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SLC26A8Q96RN1 970 aa21.82■■□□□ 1.08
LITAF-208ENST00000571627 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
LITAF-208ENST00000571627 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
LITAF-208ENST00000571627 PPP1R15AO75807 674 aaPredicted RBP21.81■■□□□ 1.08
LITAF-208ENST00000571627 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
LITAF-208ENST00000571627 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
LITAF-208ENST00000571627 BCANQ96GW7 911 aa21.8■■□□□ 1.08
LITAF-208ENST00000571627 KIF1BO60333 1816 aa21.8■■□□□ 1.08
LITAF-208ENST00000571627 PLEKHG1Q9ULL1 1385 aa21.79■■□□□ 1.08
LITAF-208ENST00000571627 XIRP1Q702N8 1843 aaKnown RBP21.79■■□□□ 1.08
LITAF-208ENST00000571627 FOXD1Q16676 465 aa21.76■■□□□ 1.07
LITAF-208ENST00000571627 SETD5Q9C0A6 1442 aa21.75■■□□□ 1.07
LITAF-208ENST00000571627 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
LITAF-208ENST00000571627 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.75■■□□□ 1.07
LITAF-208ENST00000571627 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
LITAF-208ENST00000571627 ALKQ9UM73 1620 aa21.73■■□□□ 1.07
LITAF-208ENST00000571627 ZNF326Q5BKZ1 582 aaKnown RBP21.73■■□□□ 1.07
LITAF-208ENST00000571627 CHD2O14647 1828 aaKnown RBP21.73■■□□□ 1.07
LITAF-208ENST00000571627 ADAMTS13Q76LX8 1427 aa21.72■■□□□ 1.07
LITAF-208ENST00000571627 NEXMIFQ5QGS0 1516 aa21.71■■□□□ 1.07
LITAF-208ENST00000571627 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
LITAF-208ENST00000571627 NRXN3Q9Y4C0 1643 aa21.7■■□□□ 1.06
LITAF-208ENST00000571627 KCNA6P17658 529 aa21.7■■□□□ 1.06
LITAF-208ENST00000571627 PIP4K2BP78356 416 aa21.7■■□□□ 1.06
LITAF-208ENST00000571627 RAB3GAP2Q9H2M9 1393 aa21.7■■□□□ 1.06
LITAF-208ENST00000571627 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
LITAF-208ENST00000571627 MPHOSPH9Q99550 1183 aa21.69■■□□□ 1.06
LITAF-208ENST00000571627 TOM1O60784 492 aa21.68■■□□□ 1.06
LITAF-208ENST00000571627 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
LITAF-208ENST00000571627 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
LITAF-208ENST00000571627 SETBP1Q9Y6X0 1596 aa21.66■■□□□ 1.06
LITAF-208ENST00000571627 TMEM94Q12767 1356 aa21.66■■□□□ 1.06
LITAF-208ENST00000571627 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
LITAF-208ENST00000571627 PROSER2Q86WR7 435 aaPredicted RBP21.64■■□□□ 1.05
LITAF-208ENST00000571627 PPLO60437 1756 aa21.64■■□□□ 1.05
LITAF-208ENST00000571627 CCDC144AA2RUR9 1427 aa21.62■■□□□ 1.05
LITAF-208ENST00000571627 PTPRUQ92729 1446 aa21.6■■□□□ 1.05
LITAF-208ENST00000571627 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.05
LITAF-208ENST00000571627 XRN1Q8IZH2 1706 aaKnown RBP21.58■■□□□ 1.05
LITAF-208ENST00000571627 PIK3R4Q99570 1358 aa21.58■■□□□ 1.04
LITAF-208ENST00000571627 HSPA1LP34931 641 aa21.57■■□□□ 1.04
LITAF-208ENST00000571627 SETD1AO15047 1707 aaKnown RBP21.57■■□□□ 1.04
LITAF-208ENST00000571627 IFT172Q9UG01 1749 aa21.56■■□□□ 1.04
LITAF-208ENST00000571627 METP08581 1390 aa21.56■■□□□ 1.04
LITAF-208ENST00000571627 SPATA31E1Q6ZUB1 1445 aa21.55■■□□□ 1.04
LITAF-208ENST00000571627 AMOTL2Q9Y2J4 779 aa21.54■■□□□ 1.04
LITAF-208ENST00000571627 RPGRIP1LQ68CZ1 1315 aa21.54■■□□□ 1.04
LITAF-208ENST00000571627 MSH6P52701 1360 aa21.53■■□□□ 1.04
LITAF-208ENST00000571627 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
LITAF-208ENST00000571627 VGFO15240 615 aaPredicted RBP21.52■■□□□ 1.04
LITAF-208ENST00000571627 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
LITAF-208ENST00000571627 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.5■■□□□ 1.03
LITAF-208ENST00000571627 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
LITAF-208ENST00000571627 ADGRF5Q8IZF2 1346 aa21.47■■□□□ 1.03
LITAF-208ENST00000571627 NCOA3Q9Y6Q9 1424 aa21.46■■□□□ 1.03
LITAF-208ENST00000571627 HRCP23327 699 aa21.46■■□□□ 1.03
LITAF-208ENST00000571627 ANKRD30BQ9BXX2 1392 aa21.45■■□□□ 1.02
LITAF-208ENST00000571627 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
LITAF-208ENST00000571627 NALCNQ8IZF0 1738 aa21.43■■□□□ 1.02
LITAF-208ENST00000571627 DISP3Q9P2K9 1392 aa21.43■■□□□ 1.02
LITAF-208ENST00000571627 C19orf44Q9H6X5 657 aa21.41■■□□□ 1.02
LITAF-208ENST00000571627 SLAIN2Q9P270 581 aa21.41■■□□□ 1.02
LITAF-208ENST00000571627 PIK3C2GO75747 1445 aa21.4■■□□□ 1.02
LITAF-208ENST00000571627 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.02
LITAF-208ENST00000571627 MED1Q15648 1581 aaPredicted RBP21.39■■□□□ 1.01
LITAF-208ENST00000571627 PTCH1Q13635 1447 aa21.38■■□□□ 1.01
LITAF-208ENST00000571627 ROBO2Q9HCK4 1378 aa21.38■■□□□ 1.01
LITAF-208ENST00000571627 ATF3P18847 181 aa21.38■■□□□ 1.01
LITAF-208ENST00000571627 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
LITAF-208ENST00000571627 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
LITAF-208ENST00000571627 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
LITAF-208ENST00000571627 MYOM2P54296 1465 aa21.37■■□□□ 1.01
LITAF-208ENST00000571627 DCCP43146 1447 aa21.37■■□□□ 1.01
LITAF-208ENST00000571627 NRXN1Q9ULB1 1477 aa21.35■■□□□ 1.01
LITAF-208ENST00000571627 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
LITAF-208ENST00000571627 KNDC1Q76NI1 1749 aa21.33■■□□□ 1.01
LITAF-208ENST00000571627 TMEM132EQ6IEE7 984 aa21.33■■□□□ 1.01
LITAF-208ENST00000571627 LAMC1P11047 1609 aa21.33■■□□□ 1
LITAF-208ENST00000571627 MST1RQ04912 1400 aa21.32■■□□□ 1
LITAF-208ENST00000571627 STK26Q9P289 416 aa21.31■■□□□ 1
LITAF-208ENST00000571627 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
LITAF-208ENST00000571627 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
LITAF-208ENST00000571627 TECPR2O15040 1411 aa21.29■■□□□ 1
LITAF-208ENST00000571627 CFAP70Q5T0N1 1121 aa21.28■■□□□ 1
LITAF-208ENST00000571627 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
LITAF-208ENST00000571627 BRINP3Q76B58 766 aa21.27■■□□□ 1
LITAF-208ENST00000571627 C14orf93Q9H972 538 aaKnown RBP21.27■■□□□ 1
LITAF-208ENST00000571627 KDM2AQ9Y2K7 1162 aa21.27■■□□□ 1
LITAF-208ENST00000571627 YTHDC2Q9H6S0 1430 aaKnown RBP21.27■■□□□ 1
LITAF-208ENST00000571627 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
LITAF-208ENST00000571627 DHX57Q6P158 1386 aaKnown RBP21.25■□□□□ 0.99
LITAF-208ENST00000571627 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
LITAF-208ENST00000571627 NHSL1Q5SYE7 1610 aa21.25■□□□□ 0.99
LITAF-208ENST00000571627 ABCC11Q96J66 1382 aa21.24■□□□□ 0.99
LITAF-208ENST00000571627 PLEKHH1Q9ULM0 1364 aa21.24■□□□□ 0.99
LITAF-208ENST00000571627 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
LITAF-208ENST00000571627 WAPLQ7Z5K2 1190 aa21.24■□□□□ 0.99
LITAF-208ENST00000571627 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
LITAF-208ENST00000571627 C1orf167Q5SNV9 1468 aa21.23■□□□□ 0.99
LITAF-208ENST00000571627 ADGRB1O14514 1584 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms