RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
PRPF8-202ENST00000571346 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
PRPF8-202ENST00000571346 ALKQ9UM73 1620 aa20.69■□□□□ 0.9
PRPF8-202ENST00000571346 DISP3Q9P2K9 1392 aa20.69■□□□□ 0.9
PRPF8-202ENST00000571346 NAIPQ13075 1403 aa20.69■□□□□ 0.9
PRPF8-202ENST00000571346 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
PRPF8-202ENST00000571346 XIRP1Q702N8 1843 aaKnown RBP20.67■□□□□ 0.9
PRPF8-202ENST00000571346 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
PRPF8-202ENST00000571346 PLEKHG1Q9ULL1 1385 aa20.64■□□□□ 0.89
PRPF8-202ENST00000571346 HFM1A2PYH4 1435 aa20.63■□□□□ 0.89
PRPF8-202ENST00000571346 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
PRPF8-202ENST00000571346 HSPA1LP34931 641 aa20.62■□□□□ 0.89
PRPF8-202ENST00000571346 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
PRPF8-202ENST00000571346 TMEM94Q12767 1356 aa20.6■□□□□ 0.89
PRPF8-202ENST00000571346 TRPM2O94759 1503 aa20.6■□□□□ 0.89
PRPF8-202ENST00000571346 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
PRPF8-202ENST00000571346 CLTCL1P53675 1640 aa20.59■□□□□ 0.89
PRPF8-202ENST00000571346 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
PRPF8-202ENST00000571346 KCNA6P17658 529 aa20.58■□□□□ 0.89
PRPF8-202ENST00000571346 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
PRPF8-202ENST00000571346 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
PRPF8-202ENST00000571346 CHD2O14647 1828 aaKnown RBP20.56■□□□□ 0.88
PRPF8-202ENST00000571346 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
PRPF8-202ENST00000571346 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
PRPF8-202ENST00000571346 ADAMTS13Q76LX8 1427 aa20.53■□□□□ 0.88
PRPF8-202ENST00000571346 KIF1BO60333 1816 aa20.53■□□□□ 0.88
PRPF8-202ENST00000571346 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
PRPF8-202ENST00000571346 MED1Q15648 1581 aaPredicted RBP20.53■□□□□ 0.88
PRPF8-202ENST00000571346 MSH6P52701 1360 aa20.5■□□□□ 0.87
PRPF8-202ENST00000571346 NRXN3Q9Y4C0 1643 aa20.5■□□□□ 0.87
PRPF8-202ENST00000571346 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
PRPF8-202ENST00000571346 ROBO1Q9Y6N7 1651 aa20.49■□□□□ 0.87
PRPF8-202ENST00000571346 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
PRPF8-202ENST00000571346 SETBP1Q9Y6X0 1596 aa20.49■□□□□ 0.87
PRPF8-202ENST00000571346 TBX22Q9Y458 520 aa20.48■□□□□ 0.87
PRPF8-202ENST00000571346 ILDR2Q71H61 639 aa20.46■□□□□ 0.87
PRPF8-202ENST00000571346 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
PRPF8-202ENST00000571346 C14orf37Q86TY3 774 aa20.45■□□□□ 0.86
PRPF8-202ENST00000571346 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
PRPF8-202ENST00000571346 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
PRPF8-202ENST00000571346 PTPRUQ92729 1446 aa20.42■□□□□ 0.86
PRPF8-202ENST00000571346 FOXD1Q16676 465 aa20.4■□□□□ 0.86
PRPF8-202ENST00000571346 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.39■□□□□ 0.86
PRPF8-202ENST00000571346 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
PRPF8-202ENST00000571346 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
PRPF8-202ENST00000571346 PPLO60437 1756 aa20.38■□□□□ 0.85
PRPF8-202ENST00000571346 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
PRPF8-202ENST00000571346 CCDC144AA2RUR9 1427 aa20.36■□□□□ 0.85
PRPF8-202ENST00000571346 PHLPP1O60346 1717 aa20.36■□□□□ 0.85
PRPF8-202ENST00000571346 METP08581 1390 aa20.36■□□□□ 0.85
PRPF8-202ENST00000571346 SETD1AO15047 1707 aaKnown RBP20.35■□□□□ 0.85
PRPF8-202ENST00000571346 SLAIN2Q9P270 581 aa20.34■□□□□ 0.85
PRPF8-202ENST00000571346 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
PRPF8-202ENST00000571346 ATF3P18847 181 aa20.33■□□□□ 0.85
PRPF8-202ENST00000571346 MPHOSPH9Q99550 1183 aa20.32■□□□□ 0.84
PRPF8-202ENST00000571346 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
PRPF8-202ENST00000571346 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
PRPF8-202ENST00000571346 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
PRPF8-202ENST00000571346 C19orf44Q9H6X5 657 aa20.3■□□□□ 0.84
PRPF8-202ENST00000571346 DCCP43146 1447 aa20.29■□□□□ 0.84
PRPF8-202ENST00000571346 COL16A1Q07092 1604 aaPredicted RBP20.29■□□□□ 0.84
PRPF8-202ENST00000571346 SOCS7O14512 581 aa20.29■□□□□ 0.84
PRPF8-202ENST00000571346 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
PRPF8-202ENST00000571346 RPGRIP1LQ68CZ1 1315 aa20.28■□□□□ 0.84
PRPF8-202ENST00000571346 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
PRPF8-202ENST00000571346 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
PRPF8-202ENST00000571346 PTCH1Q13635 1447 aa20.27■□□□□ 0.83
PRPF8-202ENST00000571346 AHDC1Q5TGY3 1603 aaPredicted RBP20.26■□□□□ 0.83
PRPF8-202ENST00000571346 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
PRPF8-202ENST00000571346 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
PRPF8-202ENST00000571346 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
PRPF8-202ENST00000571346 MST1RQ04912 1400 aa20.23■□□□□ 0.83
PRPF8-202ENST00000571346 ACIN1Q9UKV3 1341 aaKnown RBP20.23■□□□□ 0.83
PRPF8-202ENST00000571346 JCADQ9P266 1359 aa20.22■□□□□ 0.83
PRPF8-202ENST00000571346 ROBO2Q9HCK4 1378 aa20.21■□□□□ 0.83
PRPF8-202ENST00000571346 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
PRPF8-202ENST00000571346 ADGRF5Q8IZF2 1346 aa20.2■□□□□ 0.82
PRPF8-202ENST00000571346 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
PRPF8-202ENST00000571346 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
PRPF8-202ENST00000571346 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
PRPF8-202ENST00000571346 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
PRPF8-202ENST00000571346 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
PRPF8-202ENST00000571346 KNDC1Q76NI1 1749 aa20.15■□□□□ 0.82
PRPF8-202ENST00000571346 LRP6O75581 1613 aa20.13■□□□□ 0.81
PRPF8-202ENST00000571346 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
PRPF8-202ENST00000571346 MYOM2P54296 1465 aa20.13■□□□□ 0.81
PRPF8-202ENST00000571346 LAMC1P11047 1609 aa20.13■□□□□ 0.81
PRPF8-202ENST00000571346 C1orf167Q5SNV9 1468 aa20.12■□□□□ 0.81
PRPF8-202ENST00000571346 STK26Q9P289 416 aa20.12■□□□□ 0.81
PRPF8-202ENST00000571346 RGS17Q9UGC6 210 aaPredicted RBP20.12■□□□□ 0.81
PRPF8-202ENST00000571346 TECPR2O15040 1411 aa20.1■□□□□ 0.81
PRPF8-202ENST00000571346 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
PRPF8-202ENST00000571346 MEX3CQ5U5Q3 659 aaKnown RBP20.1■□□□□ 0.81
PRPF8-202ENST00000571346 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
PRPF8-202ENST00000571346 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
PRPF8-202ENST00000571346 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.81
PRPF8-202ENST00000571346 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
PRPF8-202ENST00000571346 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
PRPF8-202ENST00000571346 PLEKHH1Q9ULM0 1364 aa20.05■□□□□ 0.8
PRPF8-202ENST00000571346 NUTM2BA6NNL0 878 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms