RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 PLEKHG1Q9ULL1 1385 aa27.01■■□□□ 1.91
CIITA-206ENST00000571190 XIRP1Q702N8 1843 aaKnown RBP27.01■■□□□ 1.91
CIITA-206ENST00000571190 UNC13BO14795 1591 aa27.01■■□□□ 1.91
CIITA-206ENST00000571190 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
CIITA-206ENST00000571190 BCANQ96GW7 911 aa27■■□□□ 1.91
CIITA-206ENST00000571190 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
CIITA-206ENST00000571190 ITGAEP38570 1179 aa26.97■■□□□ 1.91
CIITA-206ENST00000571190 NKTRP30414 1462 aaKnown RBP26.97■■□□□ 1.91
CIITA-206ENST00000571190 NWD1Q149M9 1564 aa26.97■■□□□ 1.91
CIITA-206ENST00000571190 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
CIITA-206ENST00000571190 TMEM131LA2VDJ0 1609 aa26.96■■□□□ 1.91
CIITA-206ENST00000571190 NUP155O75694 1391 aa26.96■■□□□ 1.91
CIITA-206ENST00000571190 PPP1R15AO75807 674 aaPredicted RBP26.95■■□□□ 1.9
CIITA-206ENST00000571190 CHGAP10645 457 aaKnown RBP26.95■■□□□ 1.9
CIITA-206ENST00000571190 TBX22Q9Y458 520 aa26.95■■□□□ 1.9
CIITA-206ENST00000571190 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
CIITA-206ENST00000571190 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.92■■□□□ 1.9
CIITA-206ENST00000571190 RGS17Q9UGC6 210 aaPredicted RBP26.92■■□□□ 1.9
CIITA-206ENST00000571190 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
CIITA-206ENST00000571190 E9PCH4 1651 aa26.9■■□□□ 1.9
CIITA-206ENST00000571190 GCC2Q8IWJ2 1684 aa26.9■■□□□ 1.9
CIITA-206ENST00000571190 IQGAP3Q86VI3 1631 aa26.89■■□□□ 1.9
CIITA-206ENST00000571190 MSH6P52701 1360 aa26.88■■□□□ 1.89
CIITA-206ENST00000571190 SLAIN2Q9P270 581 aa26.87■■□□□ 1.89
CIITA-206ENST00000571190 ROBO1Q9Y6N7 1651 aa26.82■■□□□ 1.88
CIITA-206ENST00000571190 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
CIITA-206ENST00000571190 MYO5BQ9ULV0 1848 aa26.81■■□□□ 1.88
CIITA-206ENST00000571190 PIK3R4Q99570 1358 aa26.8■■□□□ 1.88
CIITA-206ENST00000571190 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
CIITA-206ENST00000571190 CHD2O14647 1828 aaKnown RBP26.77■■□□□ 1.88
CIITA-206ENST00000571190 RRBP1Q9P2E9 1410 aaKnown RBP26.76■■□□□ 1.87
CIITA-206ENST00000571190 AMOTL2Q9Y2J4 779 aa26.76■■□□□ 1.87
CIITA-206ENST00000571190 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
CIITA-206ENST00000571190 POTEAQ6S8J7 498 aa26.74■■□□□ 1.87
CIITA-206ENST00000571190 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
CIITA-206ENST00000571190 C14orf37Q86TY3 774 aa26.72■■□□□ 1.87
CIITA-206ENST00000571190 NAIPQ13075 1403 aa26.71■■□□□ 1.87
CIITA-206ENST00000571190 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.86
CIITA-206ENST00000571190 TRPM2O94759 1503 aa26.69■■□□□ 1.86
CIITA-206ENST00000571190 JCADQ9P266 1359 aa26.69■■□□□ 1.86
CIITA-206ENST00000571190 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
CIITA-206ENST00000571190 ATF3P18847 181 aa26.66■■□□□ 1.86
CIITA-206ENST00000571190 METP08581 1390 aa26.66■■□□□ 1.86
CIITA-206ENST00000571190 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
CIITA-206ENST00000571190 NRXN3Q9Y4C0 1643 aa26.64■■□□□ 1.85
CIITA-206ENST00000571190 BRINP3Q76B58 766 aa26.62■■□□□ 1.85
CIITA-206ENST00000571190 COL16A1Q07092 1604 aaPredicted RBP26.61■■□□□ 1.85
CIITA-206ENST00000571190 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
CIITA-206ENST00000571190 SPHKAPQ2M3C7 1700 aa26.6■■□□□ 1.85
CIITA-206ENST00000571190 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.6■■□□□ 1.85
CIITA-206ENST00000571190 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
CIITA-206ENST00000571190 DCCP43146 1447 aa26.57■■□□□ 1.84
CIITA-206ENST00000571190 NEXMIFQ5QGS0 1516 aa26.57■■□□□ 1.84
CIITA-206ENST00000571190 AHDC1Q5TGY3 1603 aaPredicted RBP26.57■■□□□ 1.84
CIITA-206ENST00000571190 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
CIITA-206ENST00000571190 XRN1Q8IZH2 1706 aaKnown RBP26.56■■□□□ 1.84
CIITA-206ENST00000571190 LRP6O75581 1613 aa26.56■■□□□ 1.84
CIITA-206ENST00000571190 SPATA31A6Q5VVP1 1343 aa26.56■■□□□ 1.84
CIITA-206ENST00000571190 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
CIITA-206ENST00000571190 MST1RQ04912 1400 aa26.54■■□□□ 1.84
CIITA-206ENST00000571190 SLC4A1APQ9BWU0 796 aaKnown RBP26.5■■□□□ 1.83
CIITA-206ENST00000571190 ADGRL3Q9HAR2 1447 aa26.49■■□□□ 1.83
CIITA-206ENST00000571190 VGFO15240 615 aaPredicted RBP26.48■■□□□ 1.83
CIITA-206ENST00000571190 ASXL1Q8IXJ9 1541 aa26.48■■□□□ 1.83
CIITA-206ENST00000571190 RPGRIP1LQ68CZ1 1315 aa26.45■■□□□ 1.83
CIITA-206ENST00000571190 DDX17Q92841 729 aaKnown RBP26.45■■□□□ 1.82
CIITA-206ENST00000571190 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
CIITA-206ENST00000571190 MEX3CQ5U5Q3 659 aaKnown RBP26.44■■□□□ 1.82
CIITA-206ENST00000571190 ROBO2Q9HCK4 1378 aa26.44■■□□□ 1.82
CIITA-206ENST00000571190 FOXD1Q16676 465 aa26.43■■□□□ 1.82
CIITA-206ENST00000571190 NUTM2BA6NNL0 878 aaPredicted RBP26.41■■□□□ 1.82
CIITA-206ENST00000571190 NUTM2EB1AL46 878 aaPredicted RBP26.41■■□□□ 1.82
CIITA-206ENST00000571190 ZNF772Q68DY9 489 aaPredicted RBP26.41■■□□□ 1.82
CIITA-206ENST00000571190 NUTM2AQ8IVF1 878 aaPredicted RBP26.41■■□□□ 1.82
CIITA-206ENST00000571190 PTCH1Q13635 1447 aa26.4■■□□□ 1.82
CIITA-206ENST00000571190 SHPRHQ149N8 1683 aa26.4■■□□□ 1.82
CIITA-206ENST00000571190 LRRC59Q96AG4 307 aaKnown RBP26.39■■□□□ 1.82
CIITA-206ENST00000571190 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.81
CIITA-206ENST00000571190 C1orf167Q5SNV9 1468 aa26.38■■□□□ 1.81
CIITA-206ENST00000571190 PNPLA6Q8IY17 1366 aa26.34■■□□□ 1.81
CIITA-206ENST00000571190 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
CIITA-206ENST00000571190 ORAI2Q96SN7 254 aa26.34■■□□□ 1.81
CIITA-206ENST00000571190 KIF1BO60333 1816 aa26.34■■□□□ 1.81
CIITA-206ENST00000571190 ADGRF5Q8IZF2 1346 aa26.34■■□□□ 1.81
CIITA-206ENST00000571190 SETD1AO15047 1707 aaKnown RBP26.34■■□□□ 1.81
CIITA-206ENST00000571190 NHSL1Q5SYE7 1610 aa26.33■■□□□ 1.81
CIITA-206ENST00000571190 MPHOSPH9Q99550 1183 aa26.32■■□□□ 1.8
CIITA-206ENST00000571190 AFF2P51816 1311 aa26.32■■□□□ 1.8
CIITA-206ENST00000571190 SPATA31E1Q6ZUB1 1445 aa26.3■■□□□ 1.8
CIITA-206ENST00000571190 RXRBP28702 533 aa26.29■■□□□ 1.8
CIITA-206ENST00000571190 RGL3Q3MIN7 710 aa26.29■■□□□ 1.8
CIITA-206ENST00000571190 SOS2Q07890 1332 aaPredicted RBP26.28■■□□□ 1.8
CIITA-206ENST00000571190 CCDC144AA2RUR9 1427 aa26.28■■□□□ 1.8
CIITA-206ENST00000571190 UPF1Q92900 1129 aaKnown RBP eCLIP26.25■■□□□ 1.79
CIITA-206ENST00000571190 C8orf37Q96NL8 207 aa26.25■■□□□ 1.79
CIITA-206ENST00000571190 PPLO60437 1756 aa26.23■■□□□ 1.79
CIITA-206ENST00000571190 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
CIITA-206ENST00000571190 LAMC1P11047 1609 aa26.21■■□□□ 1.79
CIITA-206ENST00000571190 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
CIITA-206ENST00000571190 STK26Q9P289 416 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms