RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
TVP23B-204ENST00000571018 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
TVP23B-204ENST00000571018 IQGAP1P46940 1657 aa18.99■□□□□ 0.63
TVP23B-204ENST00000571018 TMEM131LA2VDJ0 1609 aa18.96■□□□□ 0.63
TVP23B-204ENST00000571018 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
TVP23B-204ENST00000571018 IQSEC2Q5JU85 1478 aa18.95■□□□□ 0.62
TVP23B-204ENST00000571018 SPHKAPQ2M3C7 1700 aa18.94■□□□□ 0.62
TVP23B-204ENST00000571018 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
TVP23B-204ENST00000571018 ZFYVE9O95405 1425 aa18.93■□□□□ 0.62
TVP23B-204ENST00000571018 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
TVP23B-204ENST00000571018 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
TVP23B-204ENST00000571018 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
TVP23B-204ENST00000571018 RIMS2Q9UQ26 1411 aa18.91■□□□□ 0.62
TVP23B-204ENST00000571018 CPS1P31327 1500 aa18.91■□□□□ 0.62
TVP23B-204ENST00000571018 MYO5BQ9ULV0 1848 aa18.9■□□□□ 0.62
TVP23B-204ENST00000571018 TRPM2O94759 1503 aa18.9■□□□□ 0.62
TVP23B-204ENST00000571018 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.61
TVP23B-204ENST00000571018 MPHOSPH9Q99550 1183 aa18.88■□□□□ 0.61
TVP23B-204ENST00000571018 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
TVP23B-204ENST00000571018 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
TVP23B-204ENST00000571018 RAB3GAP2Q9H2M9 1393 aa18.86■□□□□ 0.61
TVP23B-204ENST00000571018 PPP1R15AO75807 674 aaPredicted RBP18.86■□□□□ 0.61
TVP23B-204ENST00000571018 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
TVP23B-204ENST00000571018 BCANQ96GW7 911 aa18.84■□□□□ 0.61
TVP23B-204ENST00000571018 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.61
TVP23B-204ENST00000571018 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
TVP23B-204ENST00000571018 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
TVP23B-204ENST00000571018 LRRC7Q96NW7 1537 aa18.81■□□□□ 0.6
TVP23B-204ENST00000571018 KCNA6P17658 529 aa18.81■□□□□ 0.6
TVP23B-204ENST00000571018 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
TVP23B-204ENST00000571018 HRCP23327 699 aa18.8■□□□□ 0.6
TVP23B-204ENST00000571018 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
TVP23B-204ENST00000571018 KIF1BO60333 1816 aa18.79■□□□□ 0.6
TVP23B-204ENST00000571018 ADAMTS13Q76LX8 1427 aa18.78■□□□□ 0.6
TVP23B-204ENST00000571018 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
TVP23B-204ENST00000571018 NEXMIFQ5QGS0 1516 aa18.76■□□□□ 0.59
TVP23B-204ENST00000571018 TOM1O60784 492 aa18.75■□□□□ 0.59
TVP23B-204ENST00000571018 DIP2AQ14689 1571 aa18.75■□□□□ 0.59
TVP23B-204ENST00000571018 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
TVP23B-204ENST00000571018 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
TVP23B-204ENST00000571018 PIK3R4Q99570 1358 aa18.73■□□□□ 0.59
TVP23B-204ENST00000571018 SETBP1Q9Y6X0 1596 aa18.72■□□□□ 0.59
TVP23B-204ENST00000571018 NKTRP30414 1462 aaKnown RBP18.72■□□□□ 0.59
TVP23B-204ENST00000571018 VGFO15240 615 aaPredicted RBP18.72■□□□□ 0.59
TVP23B-204ENST00000571018 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
TVP23B-204ENST00000571018 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
TVP23B-204ENST00000571018 TMEM94Q12767 1356 aa18.71■□□□□ 0.59
TVP23B-204ENST00000571018 CHD2O14647 1828 aaKnown RBP18.71■□□□□ 0.59
TVP23B-204ENST00000571018 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.58
TVP23B-204ENST00000571018 SPATA31E1Q6ZUB1 1445 aa18.7■□□□□ 0.58
TVP23B-204ENST00000571018 ALKQ9UM73 1620 aa18.68■□□□□ 0.58
TVP23B-204ENST00000571018 XIRP1Q702N8 1843 aaKnown RBP18.68■□□□□ 0.58
TVP23B-204ENST00000571018 RGL3Q3MIN7 710 aa18.67■□□□□ 0.58
TVP23B-204ENST00000571018 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
TVP23B-204ENST00000571018 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
TVP23B-204ENST00000571018 RBM33Q96EV2 1170 aaKnown RBP18.66■□□□□ 0.58
TVP23B-204ENST00000571018 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
TVP23B-204ENST00000571018 ANKRD30BQ9BXX2 1392 aa18.66■□□□□ 0.58
TVP23B-204ENST00000571018 PPLO60437 1756 aa18.65■□□□□ 0.58
TVP23B-204ENST00000571018 METP08581 1390 aa18.65■□□□□ 0.58
TVP23B-204ENST00000571018 NCOA3Q9Y6Q9 1424 aa18.64■□□□□ 0.57
TVP23B-204ENST00000571018 ADGRF5Q8IZF2 1346 aa18.61■□□□□ 0.57
TVP23B-204ENST00000571018 MSH6P52701 1360 aa18.6■□□□□ 0.57
TVP23B-204ENST00000571018 XRN1Q8IZH2 1706 aaKnown RBP18.6■□□□□ 0.57
TVP23B-204ENST00000571018 IFT172Q9UG01 1749 aa18.59■□□□□ 0.57
TVP23B-204ENST00000571018 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
TVP23B-204ENST00000571018 HSPA1LP34931 641 aa18.57■□□□□ 0.56
TVP23B-204ENST00000571018 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
TVP23B-204ENST00000571018 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
TVP23B-204ENST00000571018 PIK3C2GO75747 1445 aa18.55■□□□□ 0.56
TVP23B-204ENST00000571018 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
TVP23B-204ENST00000571018 MYOM2P54296 1465 aa18.53■□□□□ 0.56
TVP23B-204ENST00000571018 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
TVP23B-204ENST00000571018 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
TVP23B-204ENST00000571018 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
TVP23B-204ENST00000571018 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.56
TVP23B-204ENST00000571018 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
TVP23B-204ENST00000571018 PTCH1Q13635 1447 aa18.51■□□□□ 0.55
TVP23B-204ENST00000571018 ATF3P18847 181 aa18.51■□□□□ 0.55
TVP23B-204ENST00000571018 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.5■□□□□ 0.55
TVP23B-204ENST00000571018 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
TVP23B-204ENST00000571018 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
TVP23B-204ENST00000571018 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
TVP23B-204ENST00000571018 DCCP43146 1447 aa18.49■□□□□ 0.55
TVP23B-204ENST00000571018 ADGRL3Q9HAR2 1447 aa18.48■□□□□ 0.55
TVP23B-204ENST00000571018 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
TVP23B-204ENST00000571018 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
TVP23B-204ENST00000571018 DCAF11Q8TEB1 546 aa18.47■□□□□ 0.55
TVP23B-204ENST00000571018 ASXL1Q8IXJ9 1541 aa18.47■□□□□ 0.55
TVP23B-204ENST00000571018 ROBO1Q9Y6N7 1651 aa18.47■□□□□ 0.55
TVP23B-204ENST00000571018 DHX57Q6P158 1386 aaKnown RBP18.46■□□□□ 0.55
TVP23B-204ENST00000571018 ABCC11Q96J66 1382 aa18.46■□□□□ 0.55
TVP23B-204ENST00000571018 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
TVP23B-204ENST00000571018 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
TVP23B-204ENST00000571018 TECPR2O15040 1411 aa18.45■□□□□ 0.54
TVP23B-204ENST00000571018 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
TVP23B-204ENST00000571018 STK26Q9P289 416 aa18.44■□□□□ 0.54
TVP23B-204ENST00000571018 LAMC1P11047 1609 aa18.44■□□□□ 0.54
TVP23B-204ENST00000571018 YTHDC2Q9H6S0 1430 aaKnown RBP18.43■□□□□ 0.54
TVP23B-204ENST00000571018 NALCNQ8IZF0 1738 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms