RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
RPAIN-207ENST00000570883 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.8
RPAIN-207ENST00000570883 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
RPAIN-207ENST00000570883 XIRP1Q702N8 1843 aaKnown RBP20.05■□□□□ 0.8
RPAIN-207ENST00000570883 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
RPAIN-207ENST00000570883 FOXD1Q16676 465 aa20.03■□□□□ 0.8
RPAIN-207ENST00000570883 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
RPAIN-207ENST00000570883 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.8
RPAIN-207ENST00000570883 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.79
RPAIN-207ENST00000570883 NWD1Q149M9 1564 aa20.01■□□□□ 0.79
RPAIN-207ENST00000570883 CHD2O14647 1828 aaKnown RBP20.01■□□□□ 0.79
RPAIN-207ENST00000570883 LRRC7Q96NW7 1537 aa20.01■□□□□ 0.79
RPAIN-207ENST00000570883 PPLO60437 1756 aa19.99■□□□□ 0.79
RPAIN-207ENST00000570883 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-207ENST00000570883 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
RPAIN-207ENST00000570883 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-207ENST00000570883 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
RPAIN-207ENST00000570883 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
RPAIN-207ENST00000570883 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
RPAIN-207ENST00000570883 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPAIN-207ENST00000570883 SETBP1Q9Y6X0 1596 aa19.96■□□□□ 0.79
RPAIN-207ENST00000570883 ACIN1Q9UKV3 1341 aaKnown RBP19.96■□□□□ 0.79
RPAIN-207ENST00000570883 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
RPAIN-207ENST00000570883 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
RPAIN-207ENST00000570883 IFT172Q9UG01 1749 aa19.95■□□□□ 0.78
RPAIN-207ENST00000570883 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
RPAIN-207ENST00000570883 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
RPAIN-207ENST00000570883 SETD1AO15047 1707 aaKnown RBP19.93■□□□□ 0.78
RPAIN-207ENST00000570883 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
RPAIN-207ENST00000570883 BCANQ96GW7 911 aa19.92■□□□□ 0.78
RPAIN-207ENST00000570883 SPATA31E1Q6ZUB1 1445 aa19.92■□□□□ 0.78
RPAIN-207ENST00000570883 KCNA6P17658 529 aa19.9■□□□□ 0.78
RPAIN-207ENST00000570883 HRCP23327 699 aa19.89■□□□□ 0.77
RPAIN-207ENST00000570883 XRN1Q8IZH2 1706 aaKnown RBP19.89■□□□□ 0.77
RPAIN-207ENST00000570883 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
RPAIN-207ENST00000570883 UBAP1LF5GYI3 381 aa19.88■□□□□ 0.77
RPAIN-207ENST00000570883 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
RPAIN-207ENST00000570883 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
RPAIN-207ENST00000570883 PIK3R4Q99570 1358 aa19.85■□□□□ 0.77
RPAIN-207ENST00000570883 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
RPAIN-207ENST00000570883 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.77
RPAIN-207ENST00000570883 RBM33Q96EV2 1170 aaKnown RBP19.82■□□□□ 0.76
RPAIN-207ENST00000570883 METP08581 1390 aa19.82■□□□□ 0.76
RPAIN-207ENST00000570883 PROSER2Q86WR7 435 aaPredicted RBP19.8■□□□□ 0.76
RPAIN-207ENST00000570883 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
RPAIN-207ENST00000570883 TOM1O60784 492 aa19.79■□□□□ 0.76
RPAIN-207ENST00000570883 RGL3Q3MIN7 710 aa19.79■□□□□ 0.76
RPAIN-207ENST00000570883 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
RPAIN-207ENST00000570883 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
RPAIN-207ENST00000570883 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
RPAIN-207ENST00000570883 AMOTL2Q9Y2J4 779 aa19.76■□□□□ 0.75
RPAIN-207ENST00000570883 ASXL1Q8IXJ9 1541 aa19.75■□□□□ 0.75
RPAIN-207ENST00000570883 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
RPAIN-207ENST00000570883 MYOM2P54296 1465 aa19.74■□□□□ 0.75
RPAIN-207ENST00000570883 NRXN1Q9ULB1 1477 aa19.74■□□□□ 0.75
RPAIN-207ENST00000570883 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
RPAIN-207ENST00000570883 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
RPAIN-207ENST00000570883 NCOA3Q9Y6Q9 1424 aa19.73■□□□□ 0.75
RPAIN-207ENST00000570883 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
RPAIN-207ENST00000570883 ROBO1Q9Y6N7 1651 aa19.71■□□□□ 0.75
RPAIN-207ENST00000570883 MSH6P52701 1360 aa19.71■□□□□ 0.75
RPAIN-207ENST00000570883 LAMC1P11047 1609 aa19.71■□□□□ 0.75
RPAIN-207ENST00000570883 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
RPAIN-207ENST00000570883 PTCH1Q13635 1447 aa19.69■□□□□ 0.74
RPAIN-207ENST00000570883 HSPA1LP34931 641 aa19.67■□□□□ 0.74
RPAIN-207ENST00000570883 ROBO2Q9HCK4 1378 aa19.67■□□□□ 0.74
RPAIN-207ENST00000570883 TRIM26Q12899 539 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-207ENST00000570883 DHX57Q6P158 1386 aaKnown RBP19.65■□□□□ 0.74
RPAIN-207ENST00000570883 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
RPAIN-207ENST00000570883 ADGRL3Q9HAR2 1447 aa19.65■□□□□ 0.74
RPAIN-207ENST00000570883 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
RPAIN-207ENST00000570883 DCCP43146 1447 aa19.64■□□□□ 0.73
RPAIN-207ENST00000570883 TECPR2O15040 1411 aa19.63■□□□□ 0.73
RPAIN-207ENST00000570883 C19orf44Q9H6X5 657 aa19.62■□□□□ 0.73
RPAIN-207ENST00000570883 LRPPRCP42704 1394 aaKnown RBP19.61■□□□□ 0.73
RPAIN-207ENST00000570883 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
RPAIN-207ENST00000570883 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
RPAIN-207ENST00000570883 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
RPAIN-207ENST00000570883 PHLPP1O60346 1717 aa19.59■□□□□ 0.73
RPAIN-207ENST00000570883 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
RPAIN-207ENST00000570883 C14orf93Q9H972 538 aaKnown RBP19.59■□□□□ 0.73
RPAIN-207ENST00000570883 CFAP70Q5T0N1 1121 aa19.58■□□□□ 0.72
RPAIN-207ENST00000570883 CADPS2Q86UW7 1296 aa19.58■□□□□ 0.72
RPAIN-207ENST00000570883 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.72
RPAIN-207ENST00000570883 MST1RQ04912 1400 aa19.58■□□□□ 0.72
RPAIN-207ENST00000570883 ATF3P18847 181 aa19.57■□□□□ 0.72
RPAIN-207ENST00000570883 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
RPAIN-207ENST00000570883 STK26Q9P289 416 aa19.56■□□□□ 0.72
RPAIN-207ENST00000570883 KDM2AQ9Y2K7 1162 aa19.56■□□□□ 0.72
RPAIN-207ENST00000570883 CDC42BPGQ6DT37 1551 aa19.56■□□□□ 0.72
RPAIN-207ENST00000570883 COL16A1Q07092 1604 aaPredicted RBP19.55■□□□□ 0.72
RPAIN-207ENST00000570883 KIAA1210Q9ULL0 1709 aa19.55■□□□□ 0.72
RPAIN-207ENST00000570883 PLEKHH1Q9ULM0 1364 aa19.55■□□□□ 0.72
RPAIN-207ENST00000570883 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
RPAIN-207ENST00000570883 NHSL1Q5SYE7 1610 aa19.54■□□□□ 0.72
RPAIN-207ENST00000570883 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
RPAIN-207ENST00000570883 DLC1Q96QB1 1528 aa19.52■□□□□ 0.72
RPAIN-207ENST00000570883 ARHGEF28Q8N1W1 1705 aaKnown RBP19.51■□□□□ 0.71
RPAIN-207ENST00000570883 FMN2Q9NZ56 1722 aa19.51■□□□□ 0.71
RPAIN-207ENST00000570883 WAPLQ7Z5K2 1190 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms