RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 NUTM2DQ5VT03 806 aaPredicted RBP8.16□□□□□ -1.1
CHD3-212ENST00000570758 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
CHD3-212ENST00000570758 PLEKHG1Q9ULL1 1385 aa8.16□□□□□ -1.1
CHD3-212ENST00000570758 SPHKAPQ2M3C7 1700 aa8.15□□□□□ -1.1
CHD3-212ENST00000570758 TOM1O60784 492 aa8.15□□□□□ -1.1
CHD3-212ENST00000570758 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
CHD3-212ENST00000570758 KCNA6P17658 529 aa8.15□□□□□ -1.1
CHD3-212ENST00000570758 PIP4K2BP78356 416 aa8.15□□□□□ -1.1
CHD3-212ENST00000570758 BCANQ96GW7 911 aa8.15□□□□□ -1.1
CHD3-212ENST00000570758 CLTCL1P53675 1640 aa8.14□□□□□ -1.11
CHD3-212ENST00000570758 SCAF1Q9H7N4 1312 aaKnown RBP8.14□□□□□ -1.11
CHD3-212ENST00000570758 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.14□□□□□ -1.11
CHD3-212ENST00000570758 TRPM2O94759 1503 aa8.13□□□□□ -1.11
CHD3-212ENST00000570758 ADAMTS13Q76LX8 1427 aa8.13□□□□□ -1.11
CHD3-212ENST00000570758 XIRP1Q702N8 1843 aaKnown RBP8.13□□□□□ -1.11
CHD3-212ENST00000570758 HDGFP51858 240 aaKnown RBP8.13□□□□□ -1.11
CHD3-212ENST00000570758 RBM33Q96EV2 1170 aaKnown RBP8.13□□□□□ -1.11
CHD3-212ENST00000570758 SLC4A1APQ9BWU0 796 aaKnown RBP8.13□□□□□ -1.11
CHD3-212ENST00000570758 NWD1Q149M9 1564 aa8.13□□□□□ -1.11
CHD3-212ENST00000570758 TMEM94Q12767 1356 aa8.12□□□□□ -1.11
CHD3-212ENST00000570758 HSPA1LP34931 641 aa8.12□□□□□ -1.11
CHD3-212ENST00000570758 FOXD1Q16676 465 aa8.12□□□□□ -1.11
CHD3-212ENST00000570758 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
CHD3-212ENST00000570758 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
CHD3-212ENST00000570758 ZNF326Q5BKZ1 582 aaKnown RBP8.11□□□□□ -1.11
CHD3-212ENST00000570758 NKTRP30414 1462 aaKnown RBP8.11□□□□□ -1.11
CHD3-212ENST00000570758 NEXMIFQ5QGS0 1516 aa8.1□□□□□ -1.11
CHD3-212ENST00000570758 MPHOSPH9Q99550 1183 aa8.1□□□□□ -1.11
CHD3-212ENST00000570758 PTPRUQ92729 1446 aa8.1□□□□□ -1.11
CHD3-212ENST00000570758 NRXN3Q9Y4C0 1643 aa8.1□□□□□ -1.11
CHD3-212ENST00000570758 CHD2O14647 1828 aaKnown RBP8.1□□□□□ -1.11
CHD3-212ENST00000570758 DIP2AQ14689 1571 aa8.1□□□□□ -1.11
CHD3-212ENST00000570758 SETD5Q9C0A6 1442 aa8.09□□□□□ -1.11
CHD3-212ENST00000570758 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
CHD3-212ENST00000570758 DISP3Q9P2K9 1392 aa8.09□□□□□ -1.12
CHD3-212ENST00000570758 PIK3R4Q99570 1358 aa8.08□□□□□ -1.12
CHD3-212ENST00000570758 KIF1BO60333 1816 aa8.08□□□□□ -1.12
CHD3-212ENST00000570758 AMOTL2Q9Y2J4 779 aa8.07□□□□□ -1.12
CHD3-212ENST00000570758 METP08581 1390 aa8.07□□□□□ -1.12
CHD3-212ENST00000570758 RAB3GAP2Q9H2M9 1393 aa8.07□□□□□ -1.12
CHD3-212ENST00000570758 FAM135BQ49AJ0 1406 aa8.06□□□□□ -1.12
CHD3-212ENST00000570758 MSH6P52701 1360 aa8.06□□□□□ -1.12
CHD3-212ENST00000570758 NCOA3Q9Y6Q9 1424 aa8.05□□□□□ -1.12
CHD3-212ENST00000570758 ILDR2Q71H61 639 aa8.05□□□□□ -1.12
CHD3-212ENST00000570758 XRN1Q8IZH2 1706 aaKnown RBP8.05□□□□□ -1.12
CHD3-212ENST00000570758 RPGRIP1LQ68CZ1 1315 aa8.04□□□□□ -1.12
CHD3-212ENST00000570758 CCDC144AA2RUR9 1427 aa8.04□□□□□ -1.12
CHD3-212ENST00000570758 SPATA31E1Q6ZUB1 1445 aa8.04□□□□□ -1.12
CHD3-212ENST00000570758 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
CHD3-212ENST00000570758 MED1Q15648 1581 aaPredicted RBP8.04□□□□□ -1.12
CHD3-212ENST00000570758 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 PPLO60437 1756 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 ROBO1Q9Y6N7 1651 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 RGL3Q3MIN7 710 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 C14orf37Q86TY3 774 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
CHD3-212ENST00000570758 SETD1AO15047 1707 aaKnown RBP8.03□□□□□ -1.12
CHD3-212ENST00000570758 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
CHD3-212ENST00000570758 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
CHD3-212ENST00000570758 C19orf44Q9H6X5 657 aa8.02□□□□□ -1.13
CHD3-212ENST00000570758 ATF3P18847 181 aa8.01□□□□□ -1.13
CHD3-212ENST00000570758 CADPS2Q86UW7 1296 aa8.01□□□□□ -1.13
CHD3-212ENST00000570758 IFT172Q9UG01 1749 aa8□□□□□ -1.13
CHD3-212ENST00000570758 ANKRD30BQ9BXX2 1392 aa8□□□□□ -1.13
CHD3-212ENST00000570758 ROBO2Q9HCK4 1378 aa8□□□□□ -1.13
CHD3-212ENST00000570758 HRCP23327 699 aa8□□□□□ -1.13
CHD3-212ENST00000570758 ASXL1Q8IXJ9 1541 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 DCCP43146 1447 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 MST1RQ04912 1400 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 PTCH1Q13635 1447 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 PRAG1Q86YV5 1406 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 ADGRL3Q9HAR2 1447 aa7.99□□□□□ -1.13
CHD3-212ENST00000570758 PHLPP1O60346 1717 aa7.98□□□□□ -1.13
CHD3-212ENST00000570758 NALCNQ8IZF0 1738 aa7.98□□□□□ -1.13
CHD3-212ENST00000570758 PIK3C2GO75747 1445 aa7.98□□□□□ -1.13
CHD3-212ENST00000570758 TMEM132EQ6IEE7 984 aa7.98□□□□□ -1.13
CHD3-212ENST00000570758 COL16A1Q07092 1604 aaPredicted RBP7.97□□□□□ -1.13
CHD3-212ENST00000570758 STK26Q9P289 416 aa7.97□□□□□ -1.13
CHD3-212ENST00000570758 NRXN1Q9ULB1 1477 aa7.97□□□□□ -1.13
CHD3-212ENST00000570758 LRPPRCP42704 1394 aaKnown RBP7.97□□□□□ -1.13
CHD3-212ENST00000570758 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.13
CHD3-212ENST00000570758 MYOM2P54296 1465 aa7.96□□□□□ -1.13
CHD3-212ENST00000570758 CFAP70Q5T0N1 1121 aa7.96□□□□□ -1.14
CHD3-212ENST00000570758 WAPLQ7Z5K2 1190 aa7.96□□□□□ -1.14
CHD3-212ENST00000570758 PHF23Q9BUL5 403 aaPredicted RBP7.96□□□□□ -1.14
CHD3-212ENST00000570758 C14orf93Q9H972 538 aaKnown RBP7.96□□□□□ -1.14
CHD3-212ENST00000570758 JCADQ9P266 1359 aa7.96□□□□□ -1.14
CHD3-212ENST00000570758 PLEKHH1Q9ULM0 1364 aa7.96□□□□□ -1.14
CHD3-212ENST00000570758 C1orf167Q5SNV9 1468 aa7.95□□□□□ -1.14
CHD3-212ENST00000570758 DDX17Q92841 729 aaKnown RBP7.95□□□□□ -1.14
CHD3-212ENST00000570758 RGS17Q9UGC6 210 aaPredicted RBP7.95□□□□□ -1.14
CHD3-212ENST00000570758 ABCC11Q96J66 1382 aa7.95□□□□□ -1.14
CHD3-212ENST00000570758 TECPR2O15040 1411 aa7.95□□□□□ -1.14
CHD3-212ENST00000570758 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
CHD3-212ENST00000570758 SOCS7O14512 581 aa7.94□□□□□ -1.14
CHD3-212ENST00000570758 KDM2AQ9Y2K7 1162 aa7.94□□□□□ -1.14
CHD3-212ENST00000570758 KNDC1Q76NI1 1749 aa7.94□□□□□ -1.14
CHD3-212ENST00000570758 DHX57Q6P158 1386 aaKnown RBP7.94□□□□□ -1.14
CHD3-212ENST00000570758 DCAF11Q8TEB1 546 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms