RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
SMG6-206ENST00000570668 TRPM2O94759 1503 aa16.64■□□□□ 0.25
SMG6-206ENST00000570668 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMG6-206ENST00000570668 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
SMG6-206ENST00000570668 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
SMG6-206ENST00000570668 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
SMG6-206ENST00000570668 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
SMG6-206ENST00000570668 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
SMG6-206ENST00000570668 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
SMG6-206ENST00000570668 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
SMG6-206ENST00000570668 FOXD1Q16676 465 aa16.56■□□□□ 0.24
SMG6-206ENST00000570668 BCANQ96GW7 911 aa16.56■□□□□ 0.24
SMG6-206ENST00000570668 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
SMG6-206ENST00000570668 KIF1BO60333 1816 aa16.55■□□□□ 0.24
SMG6-206ENST00000570668 KCNA6P17658 529 aa16.55■□□□□ 0.24
SMG6-206ENST00000570668 HRCP23327 699 aa16.55■□□□□ 0.24
SMG6-206ENST00000570668 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
SMG6-206ENST00000570668 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
SMG6-206ENST00000570668 TBX22Q9Y458 520 aa16.54■□□□□ 0.24
SMG6-206ENST00000570668 UBAP1LF5GYI3 381 aa16.53■□□□□ 0.24
SMG6-206ENST00000570668 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
SMG6-206ENST00000570668 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
SMG6-206ENST00000570668 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
SMG6-206ENST00000570668 CCDC144AA2RUR9 1427 aa16.51■□□□□ 0.23
SMG6-206ENST00000570668 DIP2AQ14689 1571 aa16.5■□□□□ 0.23
SMG6-206ENST00000570668 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
SMG6-206ENST00000570668 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
SMG6-206ENST00000570668 TOM1O60784 492 aa16.49■□□□□ 0.23
SMG6-206ENST00000570668 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
SMG6-206ENST00000570668 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
SMG6-206ENST00000570668 SETBP1Q9Y6X0 1596 aa16.48■□□□□ 0.23
SMG6-206ENST00000570668 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
SMG6-206ENST00000570668 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
SMG6-206ENST00000570668 NRXN3Q9Y4C0 1643 aa16.47■□□□□ 0.23
SMG6-206ENST00000570668 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
SMG6-206ENST00000570668 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
SMG6-206ENST00000570668 XIRP1Q702N8 1843 aaKnown RBP16.46■□□□□ 0.23
SMG6-206ENST00000570668 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
SMG6-206ENST00000570668 ALKQ9UM73 1620 aa16.45■□□□□ 0.22
SMG6-206ENST00000570668 PPLO60437 1756 aa16.43■□□□□ 0.22
SMG6-206ENST00000570668 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
SMG6-206ENST00000570668 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
SMG6-206ENST00000570668 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
SMG6-206ENST00000570668 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
SMG6-206ENST00000570668 RBM33Q96EV2 1170 aaKnown RBP16.41■□□□□ 0.22
SMG6-206ENST00000570668 AMOTL2Q9Y2J4 779 aa16.41■□□□□ 0.22
SMG6-206ENST00000570668 METP08581 1390 aa16.4■□□□□ 0.22
SMG6-206ENST00000570668 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
SMG6-206ENST00000570668 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
SMG6-206ENST00000570668 XRN1Q8IZH2 1706 aaKnown RBP16.37■□□□□ 0.21
SMG6-206ENST00000570668 IFT172Q9UG01 1749 aa16.37■□□□□ 0.21
SMG6-206ENST00000570668 ADGRF5Q8IZF2 1346 aa16.37■□□□□ 0.21
SMG6-206ENST00000570668 MSH6P52701 1360 aa16.37■□□□□ 0.21
SMG6-206ENST00000570668 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
SMG6-206ENST00000570668 HSPA1LP34931 641 aa16.33■□□□□ 0.2
SMG6-206ENST00000570668 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.2
SMG6-206ENST00000570668 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
SMG6-206ENST00000570668 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
SMG6-206ENST00000570668 C14orf37Q86TY3 774 aa16.32■□□□□ 0.2
SMG6-206ENST00000570668 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
SMG6-206ENST00000570668 MYOM2P54296 1465 aa16.31■□□□□ 0.2
SMG6-206ENST00000570668 NRXN1Q9ULB1 1477 aa16.3■□□□□ 0.2
SMG6-206ENST00000570668 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
SMG6-206ENST00000570668 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
SMG6-206ENST00000570668 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
SMG6-206ENST00000570668 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
SMG6-206ENST00000570668 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
SMG6-206ENST00000570668 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
SMG6-206ENST00000570668 ATF3P18847 181 aa16.28■□□□□ 0.2
SMG6-206ENST00000570668 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
SMG6-206ENST00000570668 DCCP43146 1447 aa16.28■□□□□ 0.2
SMG6-206ENST00000570668 STAC3Q96MF2 364 aa16.27■□□□□ 0.2
SMG6-206ENST00000570668 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
SMG6-206ENST00000570668 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
SMG6-206ENST00000570668 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
SMG6-206ENST00000570668 ROBO1Q9Y6N7 1651 aa16.25■□□□□ 0.19
SMG6-206ENST00000570668 TECPR2O15040 1411 aa16.25■□□□□ 0.19
SMG6-206ENST00000570668 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
SMG6-206ENST00000570668 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
SMG6-206ENST00000570668 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
SMG6-206ENST00000570668 TMEM132EQ6IEE7 984 aa16.24■□□□□ 0.19
SMG6-206ENST00000570668 DCAF11Q8TEB1 546 aa16.24■□□□□ 0.19
SMG6-206ENST00000570668 LAMC1P11047 1609 aa16.23■□□□□ 0.19
SMG6-206ENST00000570668 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
SMG6-206ENST00000570668 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
SMG6-206ENST00000570668 STK26Q9P289 416 aa16.22■□□□□ 0.19
SMG6-206ENST00000570668 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
SMG6-206ENST00000570668 MST1RQ04912 1400 aa16.2■□□□□ 0.18
SMG6-206ENST00000570668 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
SMG6-206ENST00000570668 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
SMG6-206ENST00000570668 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
SMG6-206ENST00000570668 WAPLQ7Z5K2 1190 aa16.18■□□□□ 0.18
SMG6-206ENST00000570668 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
SMG6-206ENST00000570668 DISP3Q9P2K9 1392 aa16.16■□□□□ 0.18
SMG6-206ENST00000570668 PLEKHH1Q9ULM0 1364 aa16.15■□□□□ 0.18
SMG6-206ENST00000570668 SIN3AQ96ST3 1273 aa16.15■□□□□ 0.18
SMG6-206ENST00000570668 AHDC1Q5TGY3 1603 aaPredicted RBP16.15■□□□□ 0.18
SMG6-206ENST00000570668 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
SMG6-206ENST00000570668 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
SMG6-206ENST00000570668 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms