RNA–Protein interactions for RNA: ENST00000570088.1

IRF8-211, Transcript of interferon regulatory factor 8, humanhuman

TSL 4

Gene IRF8, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-211ENST00000570088 SLC26A8Q96RN1 970 aa23.04■■□□□ 1.28
IRF8-211ENST00000570088 CHGAP10645 457 aaKnown RBP23.03■■□□□ 1.28
IRF8-211ENST00000570088 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
IRF8-211ENST00000570088 XIRP1Q702N8 1843 aaKnown RBP23.02■■□□□ 1.28
IRF8-211ENST00000570088 SOCS7O14512 581 aa23.01■■□□□ 1.27
IRF8-211ENST00000570088 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
IRF8-211ENST00000570088 PPP1R15AO75807 674 aaPredicted RBP23■■□□□ 1.27
IRF8-211ENST00000570088 BCANQ96GW7 911 aa23■■□□□ 1.27
IRF8-211ENST00000570088 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
IRF8-211ENST00000570088 NWD1Q149M9 1564 aa22.99■■□□□ 1.27
IRF8-211ENST00000570088 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
IRF8-211ENST00000570088 KCNA6P17658 529 aa22.98■■□□□ 1.27
IRF8-211ENST00000570088 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
IRF8-211ENST00000570088 HSPA1LP34931 641 aa22.97■■□□□ 1.27
IRF8-211ENST00000570088 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
IRF8-211ENST00000570088 ILDR2Q71H61 639 aa22.95■■□□□ 1.26
IRF8-211ENST00000570088 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
IRF8-211ENST00000570088 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
IRF8-211ENST00000570088 NUTM2DQ5VT03 806 aaPredicted RBP22.94■■□□□ 1.26
IRF8-211ENST00000570088 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
IRF8-211ENST00000570088 TRPM2O94759 1503 aa22.92■■□□□ 1.26
IRF8-211ENST00000570088 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
IRF8-211ENST00000570088 ADAMTS13Q76LX8 1427 aa22.91■■□□□ 1.26
IRF8-211ENST00000570088 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
IRF8-211ENST00000570088 PROSER2Q86WR7 435 aaPredicted RBP22.89■■□□□ 1.25
IRF8-211ENST00000570088 TRIM52Q96A61 297 aa22.89■■□□□ 1.25
IRF8-211ENST00000570088 RBM33Q96EV2 1170 aaKnown RBP22.89■■□□□ 1.25
IRF8-211ENST00000570088 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
IRF8-211ENST00000570088 ZNF326Q5BKZ1 582 aaKnown RBP22.84■■□□□ 1.25
IRF8-211ENST00000570088 NRXN3Q9Y4C0 1643 aa22.83■■□□□ 1.25
IRF8-211ENST00000570088 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
IRF8-211ENST00000570088 KIF1BO60333 1816 aa22.82■■□□□ 1.24
IRF8-211ENST00000570088 MED1Q15648 1581 aaPredicted RBP22.82■■□□□ 1.24
IRF8-211ENST00000570088 SETBP1Q9Y6X0 1596 aa22.82■■□□□ 1.24
IRF8-211ENST00000570088 PIK3R4Q99570 1358 aa22.82■■□□□ 1.24
IRF8-211ENST00000570088 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
IRF8-211ENST00000570088 MSH6P52701 1360 aa22.81■■□□□ 1.24
IRF8-211ENST00000570088 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
IRF8-211ENST00000570088 ROBO1Q9Y6N7 1651 aa22.78■■□□□ 1.24
IRF8-211ENST00000570088 PTPRUQ92729 1446 aa22.77■■□□□ 1.24
IRF8-211ENST00000570088 NCOA3Q9Y6Q9 1424 aa22.75■■□□□ 1.23
IRF8-211ENST00000570088 XRN1Q8IZH2 1706 aaKnown RBP22.74■■□□□ 1.23
IRF8-211ENST00000570088 FOXD1Q16676 465 aa22.73■■□□□ 1.23
IRF8-211ENST00000570088 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
IRF8-211ENST00000570088 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
IRF8-211ENST00000570088 C14orf37Q86TY3 774 aa22.72■■□□□ 1.23
IRF8-211ENST00000570088 METP08581 1390 aa22.71■■□□□ 1.23
IRF8-211ENST00000570088 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.7■■□□□ 1.22
IRF8-211ENST00000570088 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
IRF8-211ENST00000570088 MPHOSPH9Q99550 1183 aa22.68■■□□□ 1.22
IRF8-211ENST00000570088 PPLO60437 1756 aa22.67■■□□□ 1.22
IRF8-211ENST00000570088 CCDC144AA2RUR9 1427 aa22.66■■□□□ 1.22
IRF8-211ENST00000570088 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
IRF8-211ENST00000570088 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
IRF8-211ENST00000570088 SETD1AO15047 1707 aaKnown RBP22.65■■□□□ 1.22
IRF8-211ENST00000570088 RPGRIP1LQ68CZ1 1315 aa22.65■■□□□ 1.22
IRF8-211ENST00000570088 VGFO15240 615 aaPredicted RBP22.65■■□□□ 1.22
IRF8-211ENST00000570088 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.21
IRF8-211ENST00000570088 PHLPP1O60346 1717 aa22.63■■□□□ 1.21
IRF8-211ENST00000570088 ATF3P18847 181 aa22.63■■□□□ 1.21
IRF8-211ENST00000570088 DCCP43146 1447 aa22.61■■□□□ 1.21
IRF8-211ENST00000570088 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
IRF8-211ENST00000570088 SPATA31E1Q6ZUB1 1445 aa22.6■■□□□ 1.21
IRF8-211ENST00000570088 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
IRF8-211ENST00000570088 COL16A1Q07092 1604 aaPredicted RBP22.58■■□□□ 1.21
IRF8-211ENST00000570088 NALCNQ8IZF0 1738 aa22.58■■□□□ 1.21
IRF8-211ENST00000570088 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
IRF8-211ENST00000570088 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
IRF8-211ENST00000570088 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
IRF8-211ENST00000570088 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
IRF8-211ENST00000570088 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
IRF8-211ENST00000570088 MST1RQ04912 1400 aa22.54■■□□□ 1.2
IRF8-211ENST00000570088 PRAG1Q86YV5 1406 aa22.53■■□□□ 1.2
IRF8-211ENST00000570088 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
IRF8-211ENST00000570088 ANKRD30BQ9BXX2 1392 aa22.52■■□□□ 1.2
IRF8-211ENST00000570088 ROBO2Q9HCK4 1378 aa22.52■■□□□ 1.2
IRF8-211ENST00000570088 JCADQ9P266 1359 aa22.52■■□□□ 1.2
IRF8-211ENST00000570088 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
IRF8-211ENST00000570088 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.19
IRF8-211ENST00000570088 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
IRF8-211ENST00000570088 RGS17Q9UGC6 210 aaPredicted RBP22.47■■□□□ 1.19
IRF8-211ENST00000570088 NHSL1Q5SYE7 1610 aa22.46■■□□□ 1.19
IRF8-211ENST00000570088 SHPRHQ149N8 1683 aa22.46■■□□□ 1.19
IRF8-211ENST00000570088 C1orf167Q5SNV9 1468 aa22.42■■□□□ 1.18
IRF8-211ENST00000570088 TECPR2O15040 1411 aa22.42■■□□□ 1.18
IRF8-211ENST00000570088 LRP6O75581 1613 aa22.42■■□□□ 1.18
IRF8-211ENST00000570088 MYOM2P54296 1465 aa22.41■■□□□ 1.18
IRF8-211ENST00000570088 KNDC1Q76NI1 1749 aa22.41■■□□□ 1.18
IRF8-211ENST00000570088 NRXN1Q9ULB1 1477 aa22.41■■□□□ 1.18
IRF8-211ENST00000570088 LRPPRCP42704 1394 aaKnown RBP22.4■■□□□ 1.18
IRF8-211ENST00000570088 SPATA31A6Q5VVP1 1343 aa22.4■■□□□ 1.18
IRF8-211ENST00000570088 CDC42BPGQ6DT37 1551 aa22.39■■□□□ 1.18
IRF8-211ENST00000570088 TMEM132EQ6IEE7 984 aa22.39■■□□□ 1.17
IRF8-211ENST00000570088 STK26Q9P289 416 aa22.39■■□□□ 1.17
IRF8-211ENST00000570088 HRCP23327 699 aa22.38■■□□□ 1.17
IRF8-211ENST00000570088 LAMC1P11047 1609 aa22.38■■□□□ 1.17
IRF8-211ENST00000570088 DDX17Q92841 729 aaKnown RBP22.37■■□□□ 1.17
IRF8-211ENST00000570088 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
IRF8-211ENST00000570088 YTHDC2Q9H6S0 1430 aaKnown RBP22.36■■□□□ 1.17
IRF8-211ENST00000570088 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms