RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 PPP1R15AO75807 674 aaPredicted RBP30.39■■■□□ 2.46
PKD1-237ENST00000569983 SLC26A8Q96RN1 970 aa30.39■■■□□ 2.46
PKD1-237ENST00000569983 SPHKAPQ2M3C7 1700 aa30.38■■■□□ 2.45
PKD1-237ENST00000569983 TRIM52Q96A61 297 aa30.37■■■□□ 2.45
PKD1-237ENST00000569983 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.35■■■□□ 2.45
PKD1-237ENST00000569983 PLEKHG1Q9ULL1 1385 aa30.35■■■□□ 2.45
PKD1-237ENST00000569983 SCAF1Q9H7N4 1312 aaKnown RBP30.34■■■□□ 2.45
PKD1-237ENST00000569983 PIP4K2BP78356 416 aa30.32■■■□□ 2.44
PKD1-237ENST00000569983 SENP3Q9H4L4 574 aaPredicted RBP30.32■■■□□ 2.44
PKD1-237ENST00000569983 KCNA6P17658 529 aa30.31■■■□□ 2.44
PKD1-237ENST00000569983 NUTM2DQ5VT03 806 aaPredicted RBP30.28■■■□□ 2.44
PKD1-237ENST00000569983 TRPM2O94759 1503 aa30.27■■■□□ 2.44
PKD1-237ENST00000569983 SLC4A1APQ9BWU0 796 aaKnown RBP30.26■■■□□ 2.43
PKD1-237ENST00000569983 ALKQ9UM73 1620 aa30.25■■■□□ 2.43
PKD1-237ENST00000569983 CLTCL1P53675 1640 aa30.23■■■□□ 2.43
PKD1-237ENST00000569983 NWD1Q149M9 1564 aa30.23■■■□□ 2.43
PKD1-237ENST00000569983 ZNF326Q5BKZ1 582 aaKnown RBP30.22■■■□□ 2.43
PKD1-237ENST00000569983 XIRP1Q702N8 1843 aaKnown RBP30.22■■■□□ 2.43
PKD1-237ENST00000569983 NKTRP30414 1462 aaKnown RBP30.21■■■□□ 2.43
PKD1-237ENST00000569983 TMEM94Q12767 1356 aa30.21■■■□□ 2.43
PKD1-237ENST00000569983 PROSER2Q86WR7 435 aaPredicted RBP30.21■■■□□ 2.43
PKD1-237ENST00000569983 TBX22Q9Y458 520 aa30.21■■■□□ 2.43
PKD1-237ENST00000569983 ADAMTS13Q76LX8 1427 aa30.19■■■□□ 2.42
PKD1-237ENST00000569983 DIP2AQ14689 1571 aa30.17■■■□□ 2.42
PKD1-237ENST00000569983 HSPA1LP34931 641 aa30.17■■■□□ 2.42
PKD1-237ENST00000569983 CHD2O14647 1828 aaKnown RBP30.16■■■□□ 2.42
PKD1-237ENST00000569983 KIF1BO60333 1816 aa30.15■■■□□ 2.42
PKD1-237ENST00000569983 RBM33Q96EV2 1170 aaKnown RBP30.14■■■□□ 2.42
PKD1-237ENST00000569983 PIK3R4Q99570 1358 aa30.12■■■□□ 2.41
PKD1-237ENST00000569983 DISP3Q9P2K9 1392 aa30.1■■■□□ 2.41
PKD1-237ENST00000569983 FOXD1Q16676 465 aa30.09■■■□□ 2.41
PKD1-237ENST00000569983 NEXMIFQ5QGS0 1516 aa30.09■■■□□ 2.41
PKD1-237ENST00000569983 SETD5Q9C0A6 1442 aa30.09■■■□□ 2.41
PKD1-237ENST00000569983 MPHOSPH9Q99550 1183 aa30.08■■■□□ 2.41
PKD1-237ENST00000569983 SETBP1Q9Y6X0 1596 aa30.07■■■□□ 2.4
PKD1-237ENST00000569983 ACIN1Q9UKV3 1341 aaKnown RBP30.07■■■□□ 2.4
PKD1-237ENST00000569983 MSH6P52701 1360 aa30.06■■■□□ 2.4
PKD1-237ENST00000569983 NRXN3Q9Y4C0 1643 aa30.06■■■□□ 2.4
PKD1-237ENST00000569983 AMOTL2Q9Y2J4 779 aa30.01■■■□□ 2.39
PKD1-237ENST00000569983 CCDC144AA2RUR9 1427 aa30■■■□□ 2.39
PKD1-237ENST00000569983 PTPRUQ92729 1446 aa30■■■□□ 2.39
PKD1-237ENST00000569983 RPGRIP1LQ68CZ1 1315 aa29.99■■■□□ 2.39
PKD1-237ENST00000569983 NCOA3Q9Y6Q9 1424 aa29.99■■■□□ 2.39
PKD1-237ENST00000569983 C14orf37Q86TY3 774 aa29.99■■■□□ 2.39
PKD1-237ENST00000569983 FAM135BQ49AJ0 1406 aa29.98■■■□□ 2.39
PKD1-237ENST00000569983 VGFO15240 615 aaPredicted RBP29.98■■■□□ 2.39
PKD1-237ENST00000569983 RAB3GAP2Q9H2M9 1393 aa29.98■■■□□ 2.39
PKD1-237ENST00000569983 METP08581 1390 aa29.95■■■□□ 2.39
PKD1-237ENST00000569983 XRN1Q8IZH2 1706 aaKnown RBP29.93■■■□□ 2.38
PKD1-237ENST00000569983 ROBO1Q9Y6N7 1651 aa29.91■■■□□ 2.38
PKD1-237ENST00000569983 PPLO60437 1756 aa29.91■■■□□ 2.38
PKD1-237ENST00000569983 SLAIN2Q9P270 581 aa29.91■■■□□ 2.38
PKD1-237ENST00000569983 C19orf44Q9H6X5 657 aa29.89■■■□□ 2.38
PKD1-237ENST00000569983 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
PKD1-237ENST00000569983 MED1Q15648 1581 aaPredicted RBP29.87■■■□□ 2.37
PKD1-237ENST00000569983 RGL3Q3MIN7 710 aa29.87■■■□□ 2.37
PKD1-237ENST00000569983 CADPS2Q86UW7 1296 aa29.87■■■□□ 2.37
PKD1-237ENST00000569983 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.87■■■□□ 2.37
PKD1-237ENST00000569983 ATF3P18847 181 aa29.86■■■□□ 2.37
PKD1-237ENST00000569983 SETD1AO15047 1707 aaKnown RBP29.83■■■□□ 2.37
PKD1-237ENST00000569983 ILDR2Q71H61 639 aa29.81■■■□□ 2.36
PKD1-237ENST00000569983 ANKRD30BQ9BXX2 1392 aa29.8■■■□□ 2.36
PKD1-237ENST00000569983 ADGRF5Q8IZF2 1346 aa29.79■■■□□ 2.36
PKD1-237ENST00000569983 DCCP43146 1447 aa29.79■■■□□ 2.36
PKD1-237ENST00000569983 IFT172Q9UG01 1749 aa29.77■■■□□ 2.36
PKD1-237ENST00000569983 HRCP23327 699 aa29.77■■■□□ 2.36
PKD1-237ENST00000569983 PTCH1Q13635 1447 aa29.76■■■□□ 2.35
PKD1-237ENST00000569983 ADGRL3Q9HAR2 1447 aa29.75■■■□□ 2.35
PKD1-237ENST00000569983 PHLPP1O60346 1717 aa29.73■■■□□ 2.35
PKD1-237ENST00000569983 PHF23Q9BUL5 403 aaPredicted RBP29.72■■■□□ 2.35
PKD1-237ENST00000569983 ROBO2Q9HCK4 1378 aa29.72■■■□□ 2.35
PKD1-237ENST00000569983 PRAG1Q86YV5 1406 aa29.71■■■□□ 2.35
PKD1-237ENST00000569983 NALCNQ8IZF0 1738 aa29.71■■■□□ 2.35
PKD1-237ENST00000569983 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
PKD1-237ENST00000569983 MST1RQ04912 1400 aa29.68■■■□□ 2.34
PKD1-237ENST00000569983 BRINP3Q76B58 766 aa29.66■■■□□ 2.34
PKD1-237ENST00000569983 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
PKD1-237ENST00000569983 AHDC1Q5TGY3 1603 aaPredicted RBP29.64■■■□□ 2.34
PKD1-237ENST00000569983 JCADQ9P266 1359 aa29.64■■■□□ 2.33
PKD1-237ENST00000569983 MYOM2P54296 1465 aa29.63■■■□□ 2.33
PKD1-237ENST00000569983 STK26Q9P289 416 aa29.62■■■□□ 2.33
PKD1-237ENST00000569983 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
PKD1-237ENST00000569983 LRPPRCP42704 1394 aaKnown RBP29.61■■■□□ 2.33
PKD1-237ENST00000569983 TMEM132EQ6IEE7 984 aa29.6■■■□□ 2.33
PKD1-237ENST00000569983 NRXN1Q9ULB1 1477 aa29.6■■■□□ 2.33
PKD1-237ENST00000569983 TECPR2O15040 1411 aa29.59■■■□□ 2.33
PKD1-237ENST00000569983 C14orf93Q9H972 538 aaKnown RBP29.58■■■□□ 2.33
PKD1-237ENST00000569983 ABCC11Q96J66 1382 aa29.57■■■□□ 2.32
PKD1-237ENST00000569983 SOCS7O14512 581 aa29.56■■■□□ 2.32
PKD1-237ENST00000569983 LAMC1P11047 1609 aa29.55■■■□□ 2.32
PKD1-237ENST00000569983 C1orf167Q5SNV9 1468 aa29.55■■■□□ 2.32
PKD1-237ENST00000569983 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
PKD1-237ENST00000569983 KNDC1Q76NI1 1749 aa29.54■■■□□ 2.32
PKD1-237ENST00000569983 CFAP70Q5T0N1 1121 aa29.54■■■□□ 2.32
PKD1-237ENST00000569983 WAPLQ7Z5K2 1190 aa29.53■■■□□ 2.32
PKD1-237ENST00000569983 NHSL1Q5SYE7 1610 aa29.52■■■□□ 2.32
PKD1-237ENST00000569983 CDC42BPGQ6DT37 1551 aa29.5■■■□□ 2.31
PKD1-237ENST00000569983 DHX57Q6P158 1386 aaKnown RBP29.5■■■□□ 2.31
PKD1-237ENST00000569983 SPATA31A6Q5VVP1 1343 aa29.49■■■□□ 2.31
PKD1-237ENST00000569983 DCAF11Q8TEB1 546 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms