RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
SHCBP1-207ENST00000569702 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
SHCBP1-207ENST00000569702 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
SHCBP1-207ENST00000569702 HRCP23327 699 aa16.49■□□□□ 0.23
SHCBP1-207ENST00000569702 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHCBP1-207ENST00000569702 FOXD1Q16676 465 aa16.48■□□□□ 0.23
SHCBP1-207ENST00000569702 CPS1P31327 1500 aa16.48■□□□□ 0.23
SHCBP1-207ENST00000569702 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
SHCBP1-207ENST00000569702 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-207ENST00000569702 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
SHCBP1-207ENST00000569702 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
SHCBP1-207ENST00000569702 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
SHCBP1-207ENST00000569702 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
SHCBP1-207ENST00000569702 KIF1BO60333 1816 aa16.42■□□□□ 0.22
SHCBP1-207ENST00000569702 BCANQ96GW7 911 aa16.41■□□□□ 0.22
SHCBP1-207ENST00000569702 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
SHCBP1-207ENST00000569702 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
SHCBP1-207ENST00000569702 CCDC144AA2RUR9 1427 aa16.4■□□□□ 0.22
SHCBP1-207ENST00000569702 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
SHCBP1-207ENST00000569702 KCNA6P17658 529 aa16.4■□□□□ 0.22
SHCBP1-207ENST00000569702 NEXMIFQ5QGS0 1516 aa16.4■□□□□ 0.22
SHCBP1-207ENST00000569702 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
SHCBP1-207ENST00000569702 RPGRIP1LQ68CZ1 1315 aa16.38■□□□□ 0.21
SHCBP1-207ENST00000569702 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
SHCBP1-207ENST00000569702 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
SHCBP1-207ENST00000569702 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
SHCBP1-207ENST00000569702 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
SHCBP1-207ENST00000569702 NRXN3Q9Y4C0 1643 aa16.35■□□□□ 0.21
SHCBP1-207ENST00000569702 PIK3R4Q99570 1358 aa16.35■□□□□ 0.21
SHCBP1-207ENST00000569702 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
SHCBP1-207ENST00000569702 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
SHCBP1-207ENST00000569702 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
SHCBP1-207ENST00000569702 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
SHCBP1-207ENST00000569702 NKTRP30414 1462 aaKnown RBP16.33■□□□□ 0.2
SHCBP1-207ENST00000569702 XIRP1Q702N8 1843 aaKnown RBP16.31■□□□□ 0.2
SHCBP1-207ENST00000569702 PPLO60437 1756 aa16.31■□□□□ 0.2
SHCBP1-207ENST00000569702 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
SHCBP1-207ENST00000569702 TOM1O60784 492 aa16.31■□□□□ 0.2
SHCBP1-207ENST00000569702 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
SHCBP1-207ENST00000569702 PTPRUQ92729 1446 aa16.3■□□□□ 0.2
SHCBP1-207ENST00000569702 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
SHCBP1-207ENST00000569702 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
SHCBP1-207ENST00000569702 METP08581 1390 aa16.29■□□□□ 0.2
SHCBP1-207ENST00000569702 AMOTL2Q9Y2J4 779 aa16.28■□□□□ 0.2
SHCBP1-207ENST00000569702 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
SHCBP1-207ENST00000569702 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
SHCBP1-207ENST00000569702 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
SHCBP1-207ENST00000569702 IFT172Q9UG01 1749 aa16.26■□□□□ 0.19
SHCBP1-207ENST00000569702 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
SHCBP1-207ENST00000569702 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-207ENST00000569702 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
SHCBP1-207ENST00000569702 PIP4K2BP78356 416 aa16.24■□□□□ 0.19
SHCBP1-207ENST00000569702 PIK3C2GO75747 1445 aa16.22■□□□□ 0.19
SHCBP1-207ENST00000569702 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
SHCBP1-207ENST00000569702 MSH6P52701 1360 aa16.21■□□□□ 0.19
SHCBP1-207ENST00000569702 MYOM2P54296 1465 aa16.21■□□□□ 0.19
SHCBP1-207ENST00000569702 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
SHCBP1-207ENST00000569702 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
SHCBP1-207ENST00000569702 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
SHCBP1-207ENST00000569702 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-207ENST00000569702 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
SHCBP1-207ENST00000569702 C14orf93Q9H972 538 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-207ENST00000569702 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
SHCBP1-207ENST00000569702 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
SHCBP1-207ENST00000569702 HSPA1LP34931 641 aa16.16■□□□□ 0.18
SHCBP1-207ENST00000569702 C14orf37Q86TY3 774 aa16.16■□□□□ 0.18
SHCBP1-207ENST00000569702 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
SHCBP1-207ENST00000569702 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
SHCBP1-207ENST00000569702 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
SHCBP1-207ENST00000569702 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-207ENST00000569702 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.18
SHCBP1-207ENST00000569702 TECPR2O15040 1411 aa16.14■□□□□ 0.17
SHCBP1-207ENST00000569702 CFAP70Q5T0N1 1121 aa16.14■□□□□ 0.17
SHCBP1-207ENST00000569702 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
SHCBP1-207ENST00000569702 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
SHCBP1-207ENST00000569702 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
SHCBP1-207ENST00000569702 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
SHCBP1-207ENST00000569702 DCCP43146 1447 aa16.13■□□□□ 0.17
SHCBP1-207ENST00000569702 ADGRL3Q9HAR2 1447 aa16.12■□□□□ 0.17
SHCBP1-207ENST00000569702 ATF3P18847 181 aa16.12■□□□□ 0.17
SHCBP1-207ENST00000569702 KDM2AQ9Y2K7 1162 aa16.12■□□□□ 0.17
SHCBP1-207ENST00000569702 LAMC1P11047 1609 aa16.11■□□□□ 0.17
SHCBP1-207ENST00000569702 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
SHCBP1-207ENST00000569702 STK26Q9P289 416 aa16.1■□□□□ 0.17
SHCBP1-207ENST00000569702 ROBO1Q9Y6N7 1651 aa16.09■□□□□ 0.17
SHCBP1-207ENST00000569702 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
SHCBP1-207ENST00000569702 NALCNQ8IZF0 1738 aa16.08■□□□□ 0.17
SHCBP1-207ENST00000569702 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
SHCBP1-207ENST00000569702 ADGRB1O14514 1584 aa16.08■□□□□ 0.16
SHCBP1-207ENST00000569702 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.16
SHCBP1-207ENST00000569702 MST1RQ04912 1400 aa16.07■□□□□ 0.16
SHCBP1-207ENST00000569702 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
SHCBP1-207ENST00000569702 PLEKHH1Q9ULM0 1364 aa16.05■□□□□ 0.16
SHCBP1-207ENST00000569702 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
SHCBP1-207ENST00000569702 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
SHCBP1-207ENST00000569702 DLC1Q96QB1 1528 aa16.03■□□□□ 0.16
SHCBP1-207ENST00000569702 NEUROD1Q13562 356 aa16.02■□□□□ 0.16
SHCBP1-207ENST00000569702 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.15
SHCBP1-207ENST00000569702 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
SHCBP1-207ENST00000569702 PRAM1Q96QH2 718 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms