RNA–Protein interactions for RNA: ENST00000569566.2

MSLN-208, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-208ENST00000569566 TOM1O60784 492 aa28.33■■■□□ 2.13
MSLN-208ENST00000569566 RIMS2Q9UQ26 1411 aa28.33■■■□□ 2.13
MSLN-208ENST00000569566 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
MSLN-208ENST00000569566 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
MSLN-208ENST00000569566 PIP4K2BP78356 416 aa28.32■■■□□ 2.12
MSLN-208ENST00000569566 SCAF1Q9H7N4 1312 aaKnown RBP28.31■■■□□ 2.12
MSLN-208ENST00000569566 PLEKHG1Q9ULL1 1385 aa28.3■■■□□ 2.12
MSLN-208ENST00000569566 HSPA1LP34931 641 aa28.3■■■□□ 2.12
MSLN-208ENST00000569566 ITGAEP38570 1179 aa28.3■■■□□ 2.12
MSLN-208ENST00000569566 NUP155O75694 1391 aa28.29■■■□□ 2.12
MSLN-208ENST00000569566 NAIPQ13075 1403 aa28.28■■■□□ 2.12
MSLN-208ENST00000569566 ILDR2Q71H61 639 aa28.28■■■□□ 2.12
MSLN-208ENST00000569566 ROBO1Q9Y6N7 1651 aa28.28■■■□□ 2.12
MSLN-208ENST00000569566 KIF1BO60333 1816 aa28.27■■■□□ 2.12
MSLN-208ENST00000569566 TRPM2O94759 1503 aa28.27■■■□□ 2.12
MSLN-208ENST00000569566 TMEM94Q12767 1356 aa28.24■■■□□ 2.11
MSLN-208ENST00000569566 XRN1Q8IZH2 1706 aaKnown RBP28.23■■■□□ 2.11
MSLN-208ENST00000569566 SLC26A8Q96RN1 970 aa28.23■■■□□ 2.11
MSLN-208ENST00000569566 ADAMTS13Q76LX8 1427 aa28.23■■■□□ 2.11
MSLN-208ENST00000569566 SETBP1Q9Y6X0 1596 aa28.2■■■□□ 2.11
MSLN-208ENST00000569566 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
MSLN-208ENST00000569566 NEXMIFQ5QGS0 1516 aa28.18■■■□□ 2.1
MSLN-208ENST00000569566 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
MSLN-208ENST00000569566 KCNA6P17658 529 aa28.17■■■□□ 2.1
MSLN-208ENST00000569566 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.15■■■□□ 2.1
MSLN-208ENST00000569566 PPLO60437 1756 aa28.11■■■□□ 2.09
MSLN-208ENST00000569566 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
MSLN-208ENST00000569566 PHLPP1O60346 1717 aa28.11■■■□□ 2.09
MSLN-208ENST00000569566 PPP1R15AO75807 674 aaPredicted RBP28.1■■■□□ 2.09
MSLN-208ENST00000569566 FAM135BQ49AJ0 1406 aa28.09■■■□□ 2.09
MSLN-208ENST00000569566 CHGAP10645 457 aaKnown RBP28.08■■■□□ 2.09
MSLN-208ENST00000569566 RBM33Q96EV2 1170 aaKnown RBP28.07■■■□□ 2.08
MSLN-208ENST00000569566 PIK3R4Q99570 1358 aa28.06■■■□□ 2.08
MSLN-208ENST00000569566 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
MSLN-208ENST00000569566 COL16A1Q07092 1604 aaPredicted RBP28.06■■■□□ 2.08
MSLN-208ENST00000569566 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
MSLN-208ENST00000569566 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
MSLN-208ENST00000569566 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.05■■■□□ 2.08
MSLN-208ENST00000569566 IFT172Q9UG01 1749 aa28.05■■■□□ 2.08
MSLN-208ENST00000569566 PROSER2Q86WR7 435 aaPredicted RBP28.04■■■□□ 2.08
MSLN-208ENST00000569566 MSH6P52701 1360 aa28.03■■■□□ 2.08
MSLN-208ENST00000569566 BCANQ96GW7 911 aa28.02■■■□□ 2.08
MSLN-208ENST00000569566 TBX22Q9Y458 520 aa28.02■■■□□ 2.08
MSLN-208ENST00000569566 NCOA3Q9Y6Q9 1424 aa28■■■□□ 2.07
MSLN-208ENST00000569566 SOCS7O14512 581 aa27.99■■■□□ 2.07
MSLN-208ENST00000569566 HDGFP51858 240 aaKnown RBP27.99■■■□□ 2.07
MSLN-208ENST00000569566 AHDC1Q5TGY3 1603 aaPredicted RBP27.97■■■□□ 2.07
MSLN-208ENST00000569566 NHSL1Q5SYE7 1610 aa27.93■■■□□ 2.06
MSLN-208ENST00000569566 SHPRHQ149N8 1683 aa27.93■■■□□ 2.06
MSLN-208ENST00000569566 DCCP43146 1447 aa27.9■■■□□ 2.06
MSLN-208ENST00000569566 METP08581 1390 aa27.89■■■□□ 2.06
MSLN-208ENST00000569566 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
MSLN-208ENST00000569566 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
MSLN-208ENST00000569566 ASXL1Q8IXJ9 1541 aa27.83■■■□□ 2.05
MSLN-208ENST00000569566 ADGRL3Q9HAR2 1447 aa27.83■■■□□ 2.05
MSLN-208ENST00000569566 KNDC1Q76NI1 1749 aa27.82■■■□□ 2.04
MSLN-208ENST00000569566 TRIM52Q96A61 297 aa27.82■■■□□ 2.04
MSLN-208ENST00000569566 SLAIN2Q9P270 581 aa27.82■■■□□ 2.04
MSLN-208ENST00000569566 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
MSLN-208ENST00000569566 PTCH1Q13635 1447 aa27.82■■■□□ 2.04
MSLN-208ENST00000569566 SLC4A1APQ9BWU0 796 aaKnown RBP27.8■■■□□ 2.04
MSLN-208ENST00000569566 MST1RQ04912 1400 aa27.8■■■□□ 2.04
MSLN-208ENST00000569566 LAMC1P11047 1609 aa27.8■■■□□ 2.04
MSLN-208ENST00000569566 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
MSLN-208ENST00000569566 LRP6O75581 1613 aa27.78■■■□□ 2.04
MSLN-208ENST00000569566 SPATA31E1Q6ZUB1 1445 aa27.77■■■□□ 2.04
MSLN-208ENST00000569566 C14orf37Q86TY3 774 aa27.75■■■□□ 2.03
MSLN-208ENST00000569566 C19orf44Q9H6X5 657 aa27.75■■■□□ 2.03
MSLN-208ENST00000569566 RGS17Q9UGC6 210 aaPredicted RBP27.75■■■□□ 2.03
MSLN-208ENST00000569566 CADPS2Q86UW7 1296 aa27.74■■■□□ 2.03
MSLN-208ENST00000569566 CCDC144AA2RUR9 1427 aa27.74■■■□□ 2.03
MSLN-208ENST00000569566 JCADQ9P266 1359 aa27.73■■■□□ 2.03
MSLN-208ENST00000569566 FOXD1Q16676 465 aa27.73■■■□□ 2.03
MSLN-208ENST00000569566 CDC42BPGQ6DT37 1551 aa27.71■■■□□ 2.03
MSLN-208ENST00000569566 ROBO2Q9HCK4 1378 aa27.69■■■□□ 2.02
MSLN-208ENST00000569566 ATF3P18847 181 aa27.68■■■□□ 2.02
MSLN-208ENST00000569566 BRINP3Q76B58 766 aa27.67■■■□□ 2.02
MSLN-208ENST00000569566 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
MSLN-208ENST00000569566 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
MSLN-208ENST00000569566 PIK3C2GO75747 1445 aa27.64■■■□□ 2.02
MSLN-208ENST00000569566 VGFO15240 615 aaPredicted RBP27.63■■■□□ 2.01
MSLN-208ENST00000569566 MPHOSPH9Q99550 1183 aa27.62■■■□□ 2.01
MSLN-208ENST00000569566 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
MSLN-208ENST00000569566 TECPR2O15040 1411 aa27.61■■■□□ 2.01
MSLN-208ENST00000569566 C1orf167Q5SNV9 1468 aa27.61■■■□□ 2.01
MSLN-208ENST00000569566 RAB3GAP2Q9H2M9 1393 aa27.6■■■□□ 2.01
MSLN-208ENST00000569566 MYOM2P54296 1465 aa27.59■■■□□ 2.01
MSLN-208ENST00000569566 NRXN1Q9ULB1 1477 aa27.59■■■□□ 2.01
MSLN-208ENST00000569566 ADGRF5Q8IZF2 1346 aa27.58■■■□□ 2.01
MSLN-208ENST00000569566 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
MSLN-208ENST00000569566 POTEAQ6S8J7 498 aa27.56■■■□□ 2
MSLN-208ENST00000569566 SPATA31A6Q5VVP1 1343 aa27.56■■■□□ 2
MSLN-208ENST00000569566 COL22A1Q8NFW1 1626 aaPredicted RBP27.55■■■□□ 2
MSLN-208ENST00000569566 RGPD8O14715 1765 aaPredicted RBP27.55■■■□□ 2
MSLN-208ENST00000569566 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
MSLN-208ENST00000569566 PNPLA6Q8IY17 1366 aa27.49■■□□□ 1.99
MSLN-208ENST00000569566 KIF1AQ12756 1690 aa27.49■■□□□ 1.99
MSLN-208ENST00000569566 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
MSLN-208ENST00000569566 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
MSLN-208ENST00000569566 DDX17Q92841 729 aaKnown RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms